Result of FASTA (ccds) for
pFN21AE1470
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1470, 181 aa
1>>>pF1KE1470 181 - 181 aa - 181 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3882+/-0.00085; mu= 11.7276+/- 0.051
mean_var=56.3156+/-10.943, 0's: 0 Z-trim(105.6): 40 B-trim: 0 in 0/50
Lambda= 0.170907
statistics sampled from 8465 (8504) to 8465 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.261), width: 16
Scan time: 1.860
The best scores are: opt bits E(32554)
CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 ( 181) 1195 302.6 8.5e-83
CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 ( 243) 1171 296.7 6.8e-81
CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 ( 247) 926 236.3 1.1e-62
CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 ( 252) 922 235.3 2.1e-62
CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX ( 199) 856 219.0 1.4e-57
CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX ( 226) 851 217.8 3.6e-57
CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX ( 255) 851 217.8 4e-57
CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX ( 192) 845 216.3 8.6e-57
CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX ( 245) 845 216.4 1.1e-56
CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 ( 225) 705 181.8 2.4e-46
CCDS9298.1 FGF9 gene_id:2254|Hs108|chr13 ( 208) 385 102.9 1.3e-22
CCDS5998.1 FGF20 gene_id:26281|Hs108|chr8 ( 211) 383 102.4 1.8e-22
CCDS75996.1 FGF16 gene_id:8823|Hs108|chrX ( 207) 369 99.0 2e-21
CCDS3950.1 FGF10 gene_id:2255|Hs108|chr5 ( 208) 317 86.1 1.4e-17
CCDS34021.1 FGF5 gene_id:2250|Hs108|chr4 ( 268) 314 85.4 3e-17
CCDS10131.1 FGF7 gene_id:2252|Hs108|chr15 ( 194) 298 81.5 3.4e-16
CCDS12037.1 FGF22 gene_id:27006|Hs108|chr19 ( 170) 296 80.9 4.3e-16
CCDS8527.1 FGF6 gene_id:2251|Hs108|chr12 ( 208) 291 79.7 1.2e-15
CCDS8194.1 FGF4 gene_id:2249|Hs108|chr11 ( 206) 278 76.5 1.1e-14
CCDS4275.1 FGF1 gene_id:2246|Hs108|chr5 ( 155) 263 72.8 1.1e-13
CCDS8195.1 FGF3 gene_id:2248|Hs108|chr11 ( 239) 233 65.5 2.8e-11
CCDS34059.1 FGF2 gene_id:2247|Hs108|chr4 ( 288) 233 65.5 3.3e-11
>>CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 (181 aa)
initn: 1195 init1: 1195 opt: 1195 Z-score: 1599.9 bits: 302.6 E(32554): 8.5e-83
Smith-Waterman score: 1195; 99.4% identity (99.4% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
CCDS46 IMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS
130 140 150 160 170 180
pF1KE1 T
:
CCDS46 T
>>CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 (243 aa)
initn: 1171 init1: 1171 opt: 1171 Z-score: 1565.8 bits: 296.7 E(32554): 6.8e-81
Smith-Waterman score: 1171; 99.4% identity (99.4% similar) in 177 aa overlap (5-181:67-243)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT
::::::::::::::::::::::::::::::
CCDS33 GRSLCERHVLGVFSKVRFCSGRKRPVRRRPEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS33 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEI
160 170 180 190 200 210
160 170 180
pF1KE1 GEKQGRSRKSSGTPTMNGGKVVNQDST
:::::::::::::::::::::::::::
CCDS33 GEKQGRSRKSSGTPTMNGGKVVNQDST
220 230 240
>>CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 (247 aa)
initn: 917 init1: 879 opt: 926 Z-score: 1239.2 bits: 236.3 E(32554): 1.1e-62
Smith-Waterman score: 926; 73.1% identity (90.3% similar) in 186 aa overlap (1-181:61-246)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGT
.. ..::::::::::. .:::.:::::::.
CCDS95 SSPSKNRGLCNGNLVDIFSKVRIFGLKKRRLRRQDPQLKGIVTRLYCRQGYYLQMHPDGA
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 IDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVF
.:::::.... :::::::::::::::::::..::.::::::::: :..::::::::::::
CCDS95 LDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVF
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 ENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQS
::::::::: :::::::::::::::::::: :::::::::::..::.:::.:: :::: :
CCDS95 ENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPS
160 170 180 190 200 210
160 170 180
pF1KE1 LHEIGE---KQGR--SRKSSGTPTMNGGKVVNQDST
::..:: : : :...:.. ::::: ::...:
CCDS95 LHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT
220 230 240
>>CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 (252 aa)
initn: 913 init1: 875 opt: 922 Z-score: 1233.8 bits: 235.3 E(32554): 2.1e-62
Smith-Waterman score: 922; 74.7% identity (90.7% similar) in 182 aa overlap (5-181:70-251)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT
.::::::::::. .:::.:::::::..:::
CCDS95 MWFLWNIFSKGTHMLQCLCGKSLKKNKNPTDPQLKGIVTRLYCRQGYYLQMHPDGALDGT
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY
::.... :::::::::::::::::::..::.::::::::: :..::::::::::::::::
CCDS95 KDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVFENYY
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI
::::: :::::::::::::::::::: :::::::::::..::.:::.:: :::: :::..
CCDS95 VIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDV
160 170 180 190 200 210
160 170 180
pF1KE1 GE---KQGR--SRKSSGTPTMNGGKVVNQDST
:: : : :...:.. ::::: ::...:
CCDS95 GETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT
220 230 240 250
>>CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX (199 aa)
initn: 887 init1: 820 opt: 856 Z-score: 1147.5 bits: 219.0 E(32554): 1.4e-57
Smith-Waterman score: 856; 68.4% identity (88.2% similar) in 187 aa overlap (3-181:15-198)
10 20 30 40
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIP
:::::::::::.:.:.::: ::.. ::::::::::.: ::::::::
CCDS55 MSGKVTKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 VGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESG
:::::::::::...::.:::.:::::.:..::::::::::::::::: ::: .::::.::
CCDS55 VGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE1 RAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTP
:.:.:::::::.:::::.:::.::..::.:::..: ::.: :::.. : ::..::::
CCDS55 RGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTE---FSRSGSGTP
130 140 150 160 170
170 180
pF1KE1 T--------MNGGKVVNQDST
: .:::: .... .
CCDS55 TKSRSVSGVLNGGKSMSHNEST
180 190
>>CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX (226 aa)
initn: 876 init1: 809 opt: 851 Z-score: 1139.9 bits: 217.8 E(32554): 3.6e-57
Smith-Waterman score: 851; 67.6% identity (87.8% similar) in 188 aa overlap (2-181:41-225)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTI
: .:::::::::.:.:.::: ::.. ::::
CCDS55 ELKKKESPFRAKCHEIFCCPLKQVHHKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE1 DGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFE
::::::.: :::::::::::::::::::...::.:::.:::::.:..:::::::::::::
CCDS55 DGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFE
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE1 NYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSL
:::: ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.: ::
CCDS55 NYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSL
140 150 160 170 180 190
160 170 180
pF1KE1 HEIGEKQGRSRKSSGTPT--------MNGGKVVNQDST
:.. : ::..::::: .:::: .... .
CCDS55 HDLTE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
200 210 220
>>CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX (255 aa)
initn: 876 init1: 809 opt: 851 Z-score: 1139.1 bits: 217.8 E(32554): 4e-57
Smith-Waterman score: 851; 67.6% identity (87.8% similar) in 188 aa overlap (2-181:70-254)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTI
: .:::::::::.:.:.::: ::.. ::::
CCDS55 ELKKKESPFRAKCHEIFCCPLKQVHHKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTI
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 DGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFE
::::::.: :::::::::::::::::::...::.:::.:::::.:..:::::::::::::
CCDS55 DGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFE
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 NYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSL
:::: ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.: ::
CCDS55 NYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSL
160 170 180 190 200 210
160 170 180
pF1KE1 HEIGEKQGRSRKSSGTPT--------MNGGKVVNQDST
:.. : ::..::::: .:::: .... .
CCDS55 HDLTE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
220 230 240 250
>>CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX (192 aa)
initn: 859 init1: 809 opt: 845 Z-score: 1133.1 bits: 216.3 E(32554): 8.6e-57
Smith-Waterman score: 845; 68.1% identity (88.1% similar) in 185 aa overlap (5-181:10-191)
10 20 30 40 50
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVA
:::::::::.:.:.::: ::.. ::::::::::.: :::::::::::::::
CCDS14 MALLRKSYSEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 IQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGL
::::...::.:::.:::::.:..::::::::::::::::: ::: .::::.:::.:.:::
CCDS14 IQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGL
70 80 90 100 110 120
120 130 140 150 160
pF1KE1 NKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPT------
::::.:::::.:::.::..::.:::..: ::.: :::.. : ::..:::::
CCDS14 NKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTE---FSRSGSGTPTKSRSVS
130 140 150 160 170
170 180
pF1KE1 --MNGGKVVNQDST
.:::: .... .
CCDS14 GVLNGGKSMSHNEST
180 190
>>CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX (245 aa)
initn: 876 init1: 809 opt: 845 Z-score: 1131.3 bits: 216.4 E(32554): 1.1e-56
Smith-Waterman score: 845; 68.1% identity (88.1% similar) in 185 aa overlap (5-181:63-244)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT
:::::::::.:.:.::: ::.. :::::::
CCDS14 KGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGT
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY
:::.: :::::::::::::::::::...::.:::.:::::.:..::::::::::::::::
CCDS14 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI
: ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.: :::..
CCDS14 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL
160 170 180 190 200 210
160 170 180
pF1KE1 GEKQGRSRKSSGTPT--------MNGGKVVNQDST
: ::..::::: .:::: .... .
CCDS14 TE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
220 230 240
>>CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 (225 aa)
initn: 726 init1: 705 opt: 705 Z-score: 945.4 bits: 181.8 E(32554): 2.4e-46
Smith-Waterman score: 705; 65.6% identity (87.3% similar) in 157 aa overlap (5-161:65-221)
10 20 30
pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT
:::::::::.:: .::..:: .:::.:.::
CCDS11 TKSLCQKQLLILLSKVRLCGGRPARPDRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGT
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY
...:..: :::::::::::.::..: . :.:::.:: :::: :: ::.::: ::::::
CCDS11 PEDTSSFTHFNLIPVGLRVVTIQSAKLGHYMAMNAEGLLYSSPHFTAECRFKECVFENYY
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI
:.:.:.::::..:::::.:::.::::.:::::::::: ..::.:: .:: ::.: ::: .
CCDS11 VLYASALYRQRRSGRAWYLGLDKEGQVMKGNRVKKTKAAAHFLPKLLEVAMYQEPSLHSV
160 170 180 190 200 210
160 170 180
pF1KE1 GEKQGRSRKSSGTPTMNGGKVVNQDST
: . :
CCDS11 PEASPSSPPAP
220
181 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:38:42 2016 done: Mon Nov 7 00:38:42 2016
Total Scan time: 1.860 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]