Result of FASTA (omim) for
pFN21AE1436
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1436, 253 aa
1>>>pF1KE1436 253 - 253 aa - 253 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7758+/-0.000404; mu= 1.5136+/- 0.025
mean_var=272.6826+/-55.682, 0's: 0 Z-trim(121.7): 436 B-trim: 660 in 1/54
Lambda= 0.077669
statistics sampled from 38195 (38660) to 38195 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.453), width: 16
Scan time: 7.560
The best scores are: opt bits E(85289)
NP_000482 (OMIM: 120570,613652) complement C1q sub ( 253) 1761 209.7 4.2e-54
XP_011540361 (OMIM: 120570,613652) PREDICTED: comp ( 253) 1761 209.7 4.2e-54
NP_758957 (OMIM: 120575,613652) complement C1q sub ( 245) 816 103.7 3.1e-22
NP_001107573 (OMIM: 120575,613652) complement C1q ( 245) 816 103.7 3.1e-22
NP_057075 (OMIM: 120550,613652) complement C1q sub ( 245) 601 79.7 5.5e-15
NP_001265360 (OMIM: 605670,608752) complement C1q ( 243) 474 65.4 1.1e-10
NP_056460 (OMIM: 605670,608752) complement C1q tum ( 243) 474 65.4 1.1e-10
NP_001171271 (OMIM: 605441,612556) adiponectin pre ( 244) 469 64.9 1.6e-10
NP_004788 (OMIM: 605441,612556) adiponectin precur ( 244) 469 64.9 1.6e-10
NP_001008224 (OMIM: 615229) complement C1q-like pr ( 238) 467 64.6 1.8e-10
NP_001010908 (OMIM: 615227) complement C1q-like pr ( 255) 432 60.7 2.9e-09
XP_011536572 (OMIM: 615229) PREDICTED: complement ( 227) 421 59.5 6.2e-09
XP_016883155 (OMIM: 120270,600969,603932) PREDICTE ( 486) 340 50.7 5.6e-06
XP_011526847 (OMIM: 120270,600969,603932) PREDICTE ( 552) 340 50.8 6.1e-06
NP_001844 (OMIM: 120270,600969,603932) collagen al ( 684) 340 50.9 7.1e-06
XP_011515191 (OMIM: 610026) PREDICTED: collagen al (1058) 342 51.3 8.2e-06
XP_011515189 (OMIM: 610026) PREDICTED: collagen al (1264) 342 51.4 9.2e-06
XP_016868641 (OMIM: 610026) PREDICTED: collagen al (1264) 342 51.4 9.2e-06
XP_016868640 (OMIM: 610026) PREDICTED: collagen al (1552) 342 51.5 1.1e-05
XP_016868639 (OMIM: 610026) PREDICTED: collagen al (1564) 342 51.5 1.1e-05
XP_011515188 (OMIM: 610026) PREDICTED: collagen al (1577) 342 51.5 1.1e-05
XP_011515187 (OMIM: 610026) PREDICTED: collagen al (1588) 342 51.5 1.1e-05
XP_011515186 (OMIM: 610026) PREDICTED: collagen al (1593) 342 51.5 1.1e-05
XP_011515185 (OMIM: 610026) PREDICTED: collagen al (1606) 342 51.5 1.1e-05
NP_690848 (OMIM: 610026) collagen alpha-1(XXII) ch (1626) 342 51.5 1.1e-05
XP_016884752 (OMIM: 301050,303630) PREDICTED: coll (1136) 336 50.7 1.4e-05
XP_016884751 (OMIM: 301050,303630) PREDICTED: coll (1289) 336 50.7 1.5e-05
XP_016884750 (OMIM: 301050,303630) PREDICTED: coll (1330) 336 50.7 1.5e-05
NP_000486 (OMIM: 301050,303630) collagen alpha-5(I (1685) 336 50.8 1.8e-05
XP_016884749 (OMIM: 301050,303630) PREDICTED: coll (1690) 336 50.9 1.8e-05
NP_203699 (OMIM: 301050,303630) collagen alpha-5(I (1691) 336 50.9 1.8e-05
XP_016884748 (OMIM: 301050,303630) PREDICTED: coll (1693) 336 50.9 1.8e-05
XP_011529151 (OMIM: 301050,303630) PREDICTED: coll (1696) 336 50.9 1.8e-05
XP_016858786 (OMIM: 120131,203780) PREDICTED: coll (1651) 333 50.5 2.2e-05
XP_016861181 (OMIM: 120120,131705,131750,131850,13 (2452) 330 50.3 3.7e-05
XP_016861180 (OMIM: 120120,131705,131750,131850,13 (2466) 330 50.4 3.7e-05
XP_016861179 (OMIM: 120120,131705,131750,131850,13 (2470) 330 50.4 3.7e-05
NP_001290039 (OMIM: 120130,175780,180000,607595,61 ( 519) 316 48.1 3.8e-05
XP_016861178 (OMIM: 120120,131705,131750,131850,13 (2609) 330 50.4 3.8e-05
XP_016861177 (OMIM: 120120,131705,131750,131850,13 (2924) 330 50.4 4.2e-05
NP_000085 (OMIM: 120120,131705,131750,131850,13200 (2944) 330 50.4 4.2e-05
XP_011531639 (OMIM: 120120,131705,131750,131850,13 (2944) 330 50.4 4.2e-05
NP_001281276 (OMIM: 120252,136800,609140) collagen ( 638) 316 48.2 4.4e-05
NP_005193 (OMIM: 120252,136800,609140) collagen al ( 703) 316 48.2 4.7e-05
XP_011515190 (OMIM: 610026) PREDICTED: collagen al (1195) 320 48.9 4.9e-05
XP_005270534 (OMIM: 120252,136800,609140) PREDICTE ( 780) 316 48.3 5e-05
XP_016855830 (OMIM: 120326) PREDICTED: collagen al (1028) 318 48.6 5.2e-05
XP_016865740 (OMIM: 120290,184840,215150,277610,60 (1342) 320 49.0 5.3e-05
XP_016855829 (OMIM: 120326) PREDICTED: collagen al (1077) 318 48.6 5.3e-05
XP_011512604 (OMIM: 120290,184840,215150,277610,60 (1365) 320 49.0 5.4e-05
>>NP_000482 (OMIM: 120570,613652) complement C1q subcomp (253 aa)
initn: 1761 init1: 1761 opt: 1761 Z-score: 1092.3 bits: 209.7 E(85289): 4.2e-54
Smith-Waterman score: 1761; 100.0% identity (100.0% similar) in 253 aa overlap (1-253:1-253)
10 20 30 40 50 60
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 CVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS
190 200 210 220 230 240
250
pF1KE1 IFSGFLLFPDMEA
:::::::::::::
NP_000 IFSGFLLFPDMEA
250
>>XP_011540361 (OMIM: 120570,613652) PREDICTED: compleme (253 aa)
initn: 1761 init1: 1761 opt: 1761 Z-score: 1092.3 bits: 209.7 E(85289): 4.2e-54
Smith-Waterman score: 1761; 100.0% identity (100.0% similar) in 253 aa overlap (1-253:1-253)
10 20 30 40 50 60
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 CVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS
190 200 210 220 230 240
250
pF1KE1 IFSGFLLFPDMEA
:::::::::::::
XP_011 IFSGFLLFPDMEA
250
>>NP_758957 (OMIM: 120575,613652) complement C1q subcomp (245 aa)
initn: 593 init1: 593 opt: 816 Z-score: 520.2 bits: 103.7 E(85289): 3.1e-22
Smith-Waterman score: 816; 50.0% identity (74.0% similar) in 246 aa overlap (5-250:8-245)
10 20 30 40 50
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPG
.: .. .:.::::: : .::. .: : :::.::.::.:: :: : ::
NP_758 MDVGPSSLPHLGLKLLLLLLLLPL--RGQANTGCYG---IPGMPGLPGAPGKDGYDGLPG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 IKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYK
::: :.:.. : .: :.::.::.::.::: :: :: : : :: : :: :: : ::
NP_758 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 ATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSR
. .:..:: . : .. :::. :.:: ...:. .:::::::::::::.::::
NP_758 QKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 GNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEG
.:::: :.:. . :::::: .. .: ::..::..:.:. ::.:.: ..: ...:..:
NP_758 ANLCVLLYRS---GVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQG
180 190 200 210 220 230
240 250
pF1KE1 ANSIFSGFLLFPDMEA
..:.:::::::::
NP_758 SDSVFSGFLLFPD
240
>>NP_001107573 (OMIM: 120575,613652) complement C1q subc (245 aa)
initn: 593 init1: 593 opt: 816 Z-score: 520.2 bits: 103.7 E(85289): 3.1e-22
Smith-Waterman score: 816; 50.0% identity (74.0% similar) in 246 aa overlap (5-250:8-245)
10 20 30 40 50
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPG
.: .. .:.::::: : .::. .: : :::.::.::.:: :: : ::
NP_001 MDVGPSSLPHLGLKLLLLLLLLPL--RGQANTGCYG---IPGMPGLPGAPGKDGYDGLPG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 IKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYK
::: :.:.. : .: :.::.::.::.::: :: :: : : :: : :: :: : ::
NP_001 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 ATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSR
. .:..:: . : .. :::. :.:: ...:. .:::::::::::::.::::
NP_001 QKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 GNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEG
.:::: :.:. . :::::: .. .: ::..::..:.:. ::.:.: ..: ...:..:
NP_001 ANLCVLLYRS---GVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQG
180 190 200 210 220 230
240 250
pF1KE1 ANSIFSGFLLFPDMEA
..:.:::::::::
NP_001 SDSVFSGFLLFPD
240
>>NP_057075 (OMIM: 120550,613652) complement C1q subcomp (245 aa)
initn: 366 init1: 202 opt: 601 Z-score: 390.0 bits: 79.7 E(85289): 5.5e-15
Smith-Waterman score: 601; 41.3% identity (67.1% similar) in 252 aa overlap (3-249:1-243)
10 20 30 40 50 60
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
:. : : . .. .: ..: .. .: : .: : : : :: :.:: : .:
NP_057 MEGPRGWL--VLCVLAISLASMVTEDL-CRAPD---GKKGEAGRPGRRGRPGLKGEQG
10 20 30 40 50
70 80 90 100 110
pF1KE1 EKGLPGL-AGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKAT
: : ::. .: .: :..:.:: ::::::: :: :: :. : :: : :: :. :
NP_057 EPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGN
. :::: : : :. . .: :: ::::... :. .::.:.: ::: ::::... :. .
NP_057 PRPAFSAIRR-NPPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 LCVNLMRG-RERAQKVVTFCDYAYN-TFQVTTGGMVLKLEQGENVFLQATDKNSLL--GM
.:.... . : .... . ::: . . :::..:::::.:.::..:... :.. . :
NP_057 ICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGS
180 190 200 210 220 230
240 250
pF1KE1 EGANSIFSGFLLFPDMEA
: :.:.:::::.::
NP_057 E-ADSVFSGFLIFPSA
240
>>NP_001265360 (OMIM: 605670,608752) complement C1q tumo (243 aa)
initn: 859 init1: 268 opt: 474 Z-score: 313.1 bits: 65.4 E(85289): 1.1e-10
Smith-Waterman score: 495; 37.2% identity (59.1% similar) in 242 aa overlap (13-250:4-235)
10 20 30 40 50 60
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
:..:::::: : . : :: ::.::::: :. : :: :
NP_001 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDG
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ
. : : : :: :: : ::.:: : ::.: :: : : : .:. ..
NP_001 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG---------PTGPAGECSVPP
60 70 80 90 100
130 140 150 160 170
pF1KE1 KIAFSATRTIN-VPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASS-RG
. :::: :. . :: : . ::.:..: ...:. .:::::.:::.:::. ::. :.
NP_001 RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 NLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQAT--DKNSLLGME
.: .:... : . : .. .:: ...:: ..:..:. : .. .
NP_001 SLQFDLVKNGESIASFFQFFG-GWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASI
170 180 190 200 210 220
240 250
pF1KE1 GANSIFSGFLLFPDMEA
..: :::::.. :
NP_001 KTDSTFSGFLVYSDWHSSPVFA
230 240
>>NP_056460 (OMIM: 605670,608752) complement C1q tumor n (243 aa)
initn: 859 init1: 268 opt: 474 Z-score: 313.1 bits: 65.4 E(85289): 1.1e-10
Smith-Waterman score: 495; 37.2% identity (59.1% similar) in 242 aa overlap (13-250:4-235)
10 20 30 40 50 60
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
:..:::::: : . : :: ::.::::: :. : :: :
NP_056 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDG
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ
. : : : :: :: : ::.:: : ::.: :: : : : .:. ..
NP_056 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG---------PTGPAGECSVPP
60 70 80 90 100
130 140 150 160 170
pF1KE1 KIAFSATRTIN-VPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASS-RG
. :::: :. . :: : . ::.:..: ...:. .:::::.:::.:::. ::. :.
NP_056 RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 NLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQAT--DKNSLLGME
.: .:... : . : .. .:: ...:: ..:..:. : .. .
NP_056 SLQFDLVKNGESIASFFQFFG-GWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASI
170 180 190 200 210 220
240 250
pF1KE1 GANSIFSGFLLFPDMEA
..: :::::.. :
NP_056 KTDSTFSGFLVYSDWHSSPVFA
230 240
>>NP_001171271 (OMIM: 605441,612556) adiponectin precurs (244 aa)
initn: 366 init1: 232 opt: 469 Z-score: 310.1 bits: 64.9 E(85289): 1.6e-10
Smith-Waterman score: 480; 38.1% identity (64.6% similar) in 226 aa overlap (30-250:35-242)
10 20 30 40 50
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPA-IPGIPGIPGTPGPDGQPGTPGI
.::: : ::: :: :.:: ::. ::::
NP_001 GAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 KGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKA
::::: ::: : .:..:: : :: : :.: :: : : :: : :
NP_001 KGEKGDPGLIGPKGDIGETGVPGAEG------------PRGFPGIQGRKGEPGE-GAYVY
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 TQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSR-
. .. . ...: .. ::: ... :..:.:. .::: :..::::::.:: .
NP_001 RSAFSVGLETYVTIP---NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYM
120 130 140 150 160
180 190 200 210 220 230
pF1KE1 GNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQAT---DKNSLLG
.. :.:.. ...:. . :. .: :. . ..:...:.:: :..:.::. ..:.: .
NP_001 KDVKVSLFK-KDKAM-LFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYA
170 180 190 200 210 220
240 250
pF1KE1 MEGANSIFSGFLLFPDMEA
. .: :.::::. :
NP_001 DNDNDSTFTGFLLYHDTN
230 240
>>NP_004788 (OMIM: 605441,612556) adiponectin precursor (244 aa)
initn: 366 init1: 232 opt: 469 Z-score: 310.1 bits: 64.9 E(85289): 1.6e-10
Smith-Waterman score: 480; 38.1% identity (64.6% similar) in 226 aa overlap (30-250:35-242)
10 20 30 40 50
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPA-IPGIPGIPGTPGPDGQPGTPGI
.::: : ::: :: :.:: ::. ::::
NP_004 GAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 KGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKA
::::: ::: : .:..:: : :: : :.: :: : : :: : :
NP_004 KGEKGDPGLIGPKGDIGETGVPGAEG------------PRGFPGIQGRKGEPGE-GAYVY
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 TQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSR-
. .. . ...: .. ::: ... :..:.:. .::: :..::::::.:: .
NP_004 RSAFSVGLETYVTIP---NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYM
120 130 140 150 160
180 190 200 210 220 230
pF1KE1 GNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQAT---DKNSLLG
.. :.:.. ...:. . :. .: :. . ..:...:.:: :..:.::. ..:.: .
NP_004 KDVKVSLFK-KDKAM-LFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYA
170 180 190 200 210 220
240 250
pF1KE1 MEGANSIFSGFLLFPDMEA
. .: :.::::. :
NP_004 DNDNDSTFTGFLLYHDTN
230 240
>>NP_001008224 (OMIM: 615229) complement C1q-like protei (238 aa)
initn: 317 init1: 317 opt: 467 Z-score: 309.0 bits: 64.6 E(85289): 1.8e-10
Smith-Waterman score: 467; 36.3% identity (59.0% similar) in 251 aa overlap (12-250:2-238)
10 20 30 40 50
pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQ---AQLSCTGPPAIPGIPGIPGTPGPDGQPGT-P
::.::. . :. :. :. : . : : ::::: :.. :
NP_001 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVP
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 GIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDY
: : .:: :..: :. : :: ::.:: : : :: :: ::: : .:
NP_001 --------PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP-GPGGVA
60 70 80 90 100
120 130 140 150 160 170
pF1KE1 KAT---QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYH
:. .::: : . : . ...::: :.::..: :: :::::: .::.:.:.::
NP_001 PAAGYVPRIAFYA--GLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYH
110 120 130 140 150
180 190 200 210 220
pF1KE1 ASSRG----NLCVNLMR-GRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATD
. :: .. ..::. :. ::. .. : :. ......:.:. :..::..
NP_001 VLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYD---YASNSVILHLDVGDEVFIKLDG
160 170 180 190 200 210
230 240 250
pF1KE1 KNSLLGMEGANSIFSGFLLFPDMEA
. : . : ::::...::
NP_001 GKVHGGNTNKYSTFSGFIIYPD
220 230
253 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:08:47 2016 done: Sun Nov 6 23:08:48 2016
Total Scan time: 7.560 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]