Result of FASTA (omim) for
pFN21AE1425
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1425, 364 aa
1>>>pF1KE1425 364 - 364 aa - 364 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4735+/-0.000325; mu= 16.8022+/- 0.020
mean_var=91.0949+/-18.592, 0's: 0 Z-trim(116.5): 139 B-trim: 0 in 0/56
Lambda= 0.134378
statistics sampled from 27615 (27785) to 27615 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.326), width: 16
Scan time: 8.250
The best scores are: opt bits E(85289)
XP_011525834 (OMIM: 159590) PREDICTED: myeloid cel ( 364) 2467 488.2 1.2e-137
NP_001763 (OMIM: 159590) myeloid cell surface anti ( 364) 2467 488.2 1.2e-137
XP_011525833 (OMIM: 159590) PREDICTED: myeloid cel ( 418) 2467 488.3 1.3e-137
XP_016882997 (OMIM: 159590) PREDICTED: myeloid cel ( 418) 2467 488.3 1.3e-137
NP_001171079 (OMIM: 159590) myeloid cell surface a ( 310) 2095 416.0 5.5e-116
XP_016882998 (OMIM: 159590) PREDICTED: myeloid cel ( 402) 1599 320.0 5.9e-87
NP_001076087 (OMIM: 159590) myeloid cell surface a ( 237) 1516 303.7 2.8e-82
XP_016882999 (OMIM: 159590) PREDICTED: myeloid cel ( 291) 1516 303.8 3.3e-82
NP_942143 (OMIM: 604405) sialic acid-binding Ig-li ( 353) 1071 217.6 3.5e-56
NP_001236 (OMIM: 604405) sialic acid-binding Ig-li ( 453) 1071 217.7 4.2e-56
XP_016883000 (OMIM: 604405) PREDICTED: sialic acid ( 362) 1036 210.8 3.9e-54
XP_011525840 (OMIM: 604405) PREDICTED: sialic acid ( 364) 1036 210.8 4e-54
NP_001171019 (OMIM: 604405) sialic acid-binding Ig ( 389) 1036 210.8 4.2e-54
XP_011525836 (OMIM: 604405) PREDICTED: sialic acid ( 458) 1036 210.9 4.7e-54
XP_011525835 (OMIM: 604405) PREDICTED: sialic acid ( 464) 1036 210.9 4.7e-54
XP_011525841 (OMIM: 604405) PREDICTED: sialic acid ( 251) 1029 209.3 7.7e-54
NP_942142 (OMIM: 604405) sialic acid-binding Ig-li ( 437) 1028 209.3 1.3e-53
XP_016882085 (OMIM: 605640) PREDICTED: sialic acid ( 410) 998 203.5 7.1e-52
NP_055256 (OMIM: 605640) sialic acid-binding Ig-li ( 463) 998 203.5 7.8e-52
XP_011525034 (OMIM: 605640) PREDICTED: sialic acid ( 465) 998 203.5 7.8e-52
NP_055200 (OMIM: 604410) sialic acid-binding Ig-li ( 467) 998 203.5 7.8e-52
XP_011525032 (OMIM: 605640) PREDICTED: sialic acid ( 477) 998 203.5 8e-52
NP_001185487 (OMIM: 605640) sialic acid-binding Ig ( 479) 998 203.5 8e-52
XP_016882084 (OMIM: 605640) PREDICTED: sialic acid ( 479) 998 203.5 8e-52
XP_006723209 (OMIM: 605640) PREDICTED: sialic acid ( 481) 998 203.5 8e-52
NP_055257 (OMIM: 605639) sialic acid-binding Ig-li ( 499) 989 201.8 2.8e-51
XP_011525036 (OMIM: 605639) PREDICTED: sialic acid ( 488) 971 198.3 3e-50
XP_011525744 (OMIM: 606094) PREDICTED: sialic acid ( 469) 960 196.2 1.3e-49
XP_011525743 (OMIM: 606094) PREDICTED: sialic acid ( 477) 960 196.2 1.3e-49
NP_201586 (OMIM: 606094) sialic acid-binding Ig-li ( 477) 960 196.2 1.3e-49
NP_443729 (OMIM: 606094) sialic acid-binding Ig-li ( 595) 960 196.3 1.5e-49
XP_011525839 (OMIM: 604405) PREDICTED: sialic acid ( 417) 906 185.6 1.7e-46
XP_011525838 (OMIM: 604405) PREDICTED: sialic acid ( 428) 871 178.9 1.9e-44
XP_011525740 (OMIM: 604200) PREDICTED: sialic acid ( 500) 869 178.5 2.8e-44
NP_003821 (OMIM: 604200) sialic acid-binding Ig-li ( 551) 869 178.6 3e-44
XP_016882908 (OMIM: 604200) PREDICTED: sialic acid ( 560) 869 178.6 3e-44
NP_001171018 (OMIM: 604405) sialic acid-binding Ig ( 401) 863 177.3 5.3e-44
NP_001309034 (OMIM: 606091) sialic acid-binding Ig ( 512) 785 162.3 2.3e-39
NP_001164628 (OMIM: 606091) sialic acid-binding Ig ( 602) 785 162.3 2.5e-39
XP_005259423 (OMIM: 606091) PREDICTED: sialic acid ( 607) 785 162.3 2.6e-39
NP_149121 (OMIM: 606091) sialic acid-binding Ig-li ( 697) 785 162.4 2.8e-39
XP_011525037 (OMIM: 605639) PREDICTED: sialic acid ( 406) 742 153.8 6.2e-37
XP_005258534 (OMIM: 607157) PREDICTED: sialic acid ( 455) 732 151.9 2.6e-36
NP_001128635 (OMIM: 607157) sialic acid-binding Ig ( 602) 732 152.1 3.2e-36
NP_443116 (OMIM: 607157) sialic acid-binding Ig-li ( 698) 732 152.1 3.5e-36
NP_057627 (OMIM: 604410) sialic acid-binding Ig-li ( 374) 711 147.8 3.7e-35
XP_005258533 (OMIM: 607157) PREDICTED: sialic acid ( 682) 702 146.3 1.9e-34
XP_011525023 (OMIM: 604410) PREDICTED: sialic acid ( 358) 553 117.2 6e-26
NP_001171020 (OMIM: 604405) sialic acid-binding Ig ( 342) 534 113.5 7.5e-25
NP_001264130 (OMIM: 604410) sialic acid-binding Ig ( 145) 504 107.3 2.2e-23
>>XP_011525834 (OMIM: 159590) PREDICTED: myeloid cell su (364 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2592.1 bits: 488.2 E(85289): 1.2e-137
Smith-Waterman score: 2467; 99.7% identity (99.7% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FREGAIISRDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
310 320 330 340 350 360
pF1KE1 VRTQ
::::
XP_011 VRTQ
>>NP_001763 (OMIM: 159590) myeloid cell surface antigen (364 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2592.1 bits: 488.2 E(85289): 1.2e-137
Smith-Waterman score: 2467; 99.7% identity (99.7% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FREGAIISRDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
310 320 330 340 350 360
pF1KE1 VRTQ
::::
NP_001 VRTQ
>>XP_011525833 (OMIM: 159590) PREDICTED: myeloid cell su (418 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2591.3 bits: 488.3 E(85289): 1.3e-137
Smith-Waterman score: 2467; 99.7% identity (99.7% similar) in 364 aa overlap (1-364:55-418)
10 20 30
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVT
::::::::::::::::::::::::::::::
XP_011 KSTSEWKDFRHGVRMSQMALKEALEAASSDMPLLLLLPLLWAGALAMDPNFWLQVQESVT
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE1 VQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRF
:::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
XP_011 VQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGAIISRDSPVATNKLDQEVQEETQGRF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE1 RLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIP
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE1 GTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE1 TCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTAL
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE1 LALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAP
330 340 350 360 370 380
340 350 360
pF1KE1 TVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
::::::::::::::::::::::::::::::::::
XP_011 TVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
390 400 410
>>XP_016882997 (OMIM: 159590) PREDICTED: myeloid cell su (418 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2591.3 bits: 488.3 E(85289): 1.3e-137
Smith-Waterman score: 2467; 99.7% identity (99.7% similar) in 364 aa overlap (1-364:55-418)
10 20 30
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVT
::::::::::::::::::::::::::::::
XP_016 KSTSEWKDFRHGVRMSQMALKEALEAASSDMPLLLLLPLLWAGALAMDPNFWLQVQESVT
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE1 VQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRF
:::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
XP_016 VQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGAIISRDSPVATNKLDQEVQEETQGRF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE1 RLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIP
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE1 GTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE1 TCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTAL
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE1 LALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAP
330 340 350 360 370 380
340 350 360
pF1KE1 TVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
::::::::::::::::::::::::::::::::::
XP_016 TVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
390 400 410
>>NP_001171079 (OMIM: 159590) myeloid cell surface antig (310 aa)
initn: 2095 init1: 2095 opt: 2095 Z-score: 2203.3 bits: 416.0 E(85289): 5.5e-116
Smith-Waterman score: 2095; 99.7% identity (99.7% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FREGAIISRDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
::::::::
NP_001 PTTGSASPVR
310
>>XP_016882998 (OMIM: 159590) PREDICTED: myeloid cell su (402 aa)
initn: 2389 init1: 1588 opt: 1599 Z-score: 1682.1 bits: 320.0 E(85289): 5.9e-87
Smith-Waterman score: 2302; 95.1% identity (95.3% similar) in 364 aa overlap (1-364:55-402)
10 20 30
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVT
::::::::::::::::::::::::::::::
XP_016 KSTSEWKDFRHGVRMSQMALKEALEAASSDMPLLLLLPLLWAGALAMDPNFWLQVQESVT
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE1 VQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRF
:::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
XP_016 VQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGAIISRDSPVATNKLDQEVQEETQGRF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE1 RLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIP
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE1 GTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE1 TCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTAL
::::::::::::::::::::::. :::::::::::::::::::::
XP_016 TCQVKFAGAGVTTERTIQLNVTW----------------KQETRAGVVHGAIGGAGVTAL
270 280 290 300
280 290 300 310 320 330
pF1KE1 LALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAP
310 320 330 340 350 360
340 350 360
pF1KE1 TVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
::::::::::::::::::::::::::::::::::
XP_016 TVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
370 380 390 400
>>NP_001076087 (OMIM: 159590) myeloid cell surface antig (237 aa)
initn: 1584 init1: 1516 opt: 1516 Z-score: 1598.2 bits: 303.7 E(85289): 2.8e-82
Smith-Waterman score: 1516; 100.0% identity (100.0% similar) in 225 aa overlap (140-364:13-237)
110 120 130 140 150 160
pF1KE1 RRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWAC
::::::::::::::::::::::::::::::
NP_001 MPLLLLLPLLWADLTHRPKILIPGTLEPGHSKNLTCSVSWAC
10 20 30 40
170 180 190 200 210 220
pF1KE1 EQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQL
50 60 70 80 90 100
230 240 250 260 270 280
pF1KE1 NVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKA
110 120 130 140 150 160
290 300 310 320 330 340
pF1KE1 ARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMN
170 180 190 200 210 220
350 360
pF1KE1 PSKDTSTEYSEVRTQ
:::::::::::::::
NP_001 PSKDTSTEYSEVRTQ
230
>>XP_016882999 (OMIM: 159590) PREDICTED: myeloid cell su (291 aa)
initn: 1584 init1: 1516 opt: 1516 Z-score: 1597.0 bits: 303.8 E(85289): 3.3e-82
Smith-Waterman score: 1516; 100.0% identity (100.0% similar) in 225 aa overlap (140-364:67-291)
110 120 130 140 150 160
pF1KE1 RRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWAC
::::::::::::::::::::::::::::::
XP_016 VRMSQMALKEALEAASSDMPLLLLLPLLWADLTHRPKILIPGTLEPGHSKNLTCSVSWAC
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE1 EQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE1 NVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKA
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE1 ARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMN
220 230 240 250 260 270
350 360
pF1KE1 PSKDTSTEYSEVRTQ
:::::::::::::::
XP_016 PSKDTSTEYSEVRTQ
280 290
>>NP_942143 (OMIM: 604405) sialic acid-binding Ig-like l (353 aa)
initn: 1113 init1: 861 opt: 1071 Z-score: 1129.6 bits: 217.6 E(85289): 3.5e-56
Smith-Waterman score: 1077; 67.7% identity (80.6% similar) in 248 aa overlap (3-248:13-251)
10 20 30 40
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIP--
: ::::::::::::.. : :. ::.:::::::::::: . .:
NP_942 MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPAS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 YYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDA
:: .:::: ::: : ::::: :.::::::.:::.:: :: :.:::::: ::
NP_942 YYG-----YGYWFLEGA----DVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWA
:::::..::::.. ::.: : .:::.: :::::.: :::::: :: .:::::: :.
NP_942 RRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQ
:::::::::::.::::::::::::.:::: ::::::::.::::::: : ::::: :::::
NP_942 CEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 LNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRK
:::.:.::. . .:: :...
NP_942 LNVSYAPQKVAISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFP
240 250 260 270 280 290
>>NP_001236 (OMIM: 604405) sialic acid-binding Ig-like l (453 aa)
initn: 1372 init1: 861 opt: 1071 Z-score: 1128.2 bits: 217.7 E(85289): 4.2e-56
Smith-Waterman score: 1077; 67.7% identity (80.6% similar) in 248 aa overlap (3-248:13-251)
10 20 30 40
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIP--
: ::::::::::::.. : :. ::.:::::::::::: . .:
NP_001 MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPAS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 YYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDA
:: .:::: ::: : ::::: :.::::::.:::.:: :: :.:::::: ::
NP_001 YYG-----YGYWFLEGA----DVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWA
:::::..::::.. ::.: : .:::.: :::::.: :::::: :: .:::::: :.
NP_001 RRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQ
:::::::::::.::::::::::::.:::: ::::::::.::::::: : ::::: :::::
NP_001 CEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 LNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRK
:::.:.::. . .:: :...
NP_001 LNVSYAPQKVAISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFP
240 250 260 270 280 290
>--
initn: 324 init1: 104 opt: 266 Z-score: 284.8 bits: 61.6 E(85289): 4e-09
Smith-Waterman score: 276; 31.7% identity (62.8% similar) in 199 aa overlap (169-362:274-450)
140 150 160 170 180 190
pF1KE1 TDLTHRPKILIPGTLEPGHSKNLTCSVSWACE-QGTPPI-FSWLSAAPTSLGPRTTHSSV
:. .:.:: .::... :. . ....:
NP_001 SIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFPALNATPISNTGV
250 260 270 280 290 300
200 210 220 230 240 250
pF1KE1 LIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVT-YVPQNPTTGIFPGDGSGKQETRA
: . . . ..::... : ..:.... .: .: : ::
NP_001 LELPQVGSAEEGDFTCRAQHP-LG-----SLQISLSLFVHWKP-------------EGRA
310 320 330 340
260 270 280 290 300 310
pF1KE1 GVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSK
: : ::. ::..:.:. ::.:.:: :::.:.:::. . . .:..:. :.: ::.. .
NP_001 GGVLGAVWGASITTLVFLCVCFIFR-VKTRRKKAAQPVQNTDDVNPVMVSGSRGHQHQFQ
350 360 370 380 390 400
320 330 340 350 360
pF1KE1 LHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPS--KDTSTEYSEVRTQ
.. . .: : : ..::::: :.:: ..:. : :.:::::..
NP_001 TGIVSDHPAEAG--PISEDEQELHYAVLHFHKVQPQEPKVTDTEYSEIKIHK
410 420 430 440 450
364 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:20:40 2016 done: Mon Nov 7 00:20:41 2016
Total Scan time: 8.250 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]