Result of FASTA (ccds) for
pFN21AE1425
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1425, 364 aa
1>>>pF1KE1425 364 - 364 aa - 364 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6313+/-0.000797; mu= 15.5992+/- 0.048
mean_var=86.5913+/-17.743, 0's: 0 Z-trim(109.3): 68 B-trim: 438 in 2/52
Lambda= 0.137828
statistics sampled from 10723 (10793) to 10723 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.332), width: 16
Scan time: 2.910
The best scores are: opt bits E(32554)
CCDS33084.1 CD33 gene_id:945|Hs108|chr19 ( 364) 2467 500.3 1.1e-141
CCDS54299.1 CD33 gene_id:945|Hs108|chr19 ( 310) 2095 426.3 1.8e-119
CCDS46157.1 CD33 gene_id:945|Hs108|chr19 ( 237) 1516 311.0 6.5e-85
CCDS12836.3 SIGLEC6 gene_id:946|Hs108|chr19 ( 353) 1071 222.7 3.9e-58
CCDS12834.3 SIGLEC6 gene_id:946|Hs108|chr19 ( 453) 1071 222.8 4.7e-58
CCDS54308.1 SIGLEC6 gene_id:946|Hs108|chr19 ( 389) 1036 215.8 5.2e-56
CCDS12835.3 SIGLEC6 gene_id:946|Hs108|chr19 ( 437) 1028 214.2 1.7e-55
CCDS12825.1 SIGLEC9 gene_id:27180|Hs108|chr19 ( 463) 998 208.3 1.1e-53
CCDS12826.1 SIGLEC7 gene_id:27036|Hs108|chr19 ( 467) 998 208.3 1.1e-53
CCDS56100.1 SIGLEC9 gene_id:27180|Hs108|chr19 ( 479) 998 208.3 1.1e-53
CCDS33086.1 SIGLEC8 gene_id:27181|Hs108|chr19 ( 499) 989 206.5 4.1e-53
CCDS59416.1 SIGLEC12 gene_id:89858|Hs108|chr19 ( 477) 960 200.7 2.1e-51
CCDS12833.1 SIGLEC12 gene_id:89858|Hs108|chr19 ( 595) 960 200.8 2.5e-51
CCDS42604.1 SIGLEC14 gene_id:100049587|Hs108|chr19 ( 396) 899 188.5 8.3e-48
CCDS33088.1 SIGLEC5 gene_id:8778|Hs108|chr19 ( 551) 869 182.7 6.7e-46
CCDS54307.1 SIGLEC6 gene_id:946|Hs108|chr19 ( 401) 863 181.4 1.2e-45
CCDS82384.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 512) 785 165.9 6.8e-41
CCDS54305.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 602) 785 166.0 7.7e-41
CCDS12832.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 697) 785 166.0 8.6e-41
CCDS46150.1 SIGLEC11 gene_id:114132|Hs108|chr19 ( 602) 732 155.5 1.1e-37
CCDS12790.2 SIGLEC11 gene_id:114132|Hs108|chr19 ( 698) 732 155.5 1.3e-37
CCDS42601.1 SIGLEC7 gene_id:27036|Hs108|chr19 ( 374) 711 151.1 1.4e-36
CCDS59417.1 SIGLEC6 gene_id:946|Hs108|chr19 ( 342) 534 115.9 5.2e-26
CCDS62771.1 SIGLEC7 gene_id:27036|Hs108|chr19 ( 145) 504 109.7 1.7e-24
CCDS54302.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 544) 484 106.1 7.4e-23
CCDS54303.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 639) 484 106.2 8.4e-23
CCDS54304.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 554) 471 103.5 4.5e-22
CCDS54301.1 SIGLEC10 gene_id:89790|Hs108|chr19 ( 454) 469 103.1 5.1e-22
CCDS12456.1 MAG gene_id:4099|Hs108|chr19 ( 582) 353 80.1 5.4e-15
CCDS12455.1 MAG gene_id:4099|Hs108|chr19 ( 626) 353 80.1 5.7e-15
CCDS56090.1 MAG gene_id:4099|Hs108|chr19 ( 601) 321 73.7 4.6e-13
>>CCDS33084.1 CD33 gene_id:945|Hs108|chr19 (364 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2657.3 bits: 500.3 E(32554): 1.1e-141
Smith-Waterman score: 2467; 99.7% identity (99.7% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FREGAIISRDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
310 320 330 340 350 360
pF1KE1 VRTQ
::::
CCDS33 VRTQ
>>CCDS54299.1 CD33 gene_id:945|Hs108|chr19 (310 aa)
initn: 2095 init1: 2095 opt: 2095 Z-score: 2258.5 bits: 426.3 E(32554): 1.8e-119
Smith-Waterman score: 2095; 99.7% identity (99.7% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 FREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FREGAIISRDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSE
::::::::
CCDS54 PTTGSASPVR
310
>>CCDS46157.1 CD33 gene_id:945|Hs108|chr19 (237 aa)
initn: 1584 init1: 1516 opt: 1516 Z-score: 1637.9 bits: 311.0 E(32554): 6.5e-85
Smith-Waterman score: 1516; 100.0% identity (100.0% similar) in 225 aa overlap (140-364:13-237)
110 120 130 140 150 160
pF1KE1 RRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWAC
::::::::::::::::::::::::::::::
CCDS46 MPLLLLLPLLWADLTHRPKILIPGTLEPGHSKNLTCSVSWAC
10 20 30 40
170 180 190 200 210 220
pF1KE1 EQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQL
50 60 70 80 90 100
230 240 250 260 270 280
pF1KE1 NVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKA
110 120 130 140 150 160
290 300 310 320 330 340
pF1KE1 ARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMN
170 180 190 200 210 220
350 360
pF1KE1 PSKDTSTEYSEVRTQ
:::::::::::::::
CCDS46 PSKDTSTEYSEVRTQ
230
>>CCDS12836.3 SIGLEC6 gene_id:946|Hs108|chr19 (353 aa)
initn: 1113 init1: 861 opt: 1071 Z-score: 1157.3 bits: 222.7 E(32554): 3.9e-58
Smith-Waterman score: 1077; 67.7% identity (80.6% similar) in 248 aa overlap (3-248:13-251)
10 20 30 40
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIP--
: ::::::::::::.. : :. ::.:::::::::::: . .:
CCDS12 MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPAS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 YYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDA
:: .:::: ::: : ::::: :.::::::.:::.:: :: :.:::::: ::
CCDS12 YYG-----YGYWFLEGA----DVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWA
:::::..::::.. ::.: : .:::.: :::::.: :::::: :: .:::::: :.
CCDS12 RRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQ
:::::::::::.::::::::::::.:::: ::::::::.::::::: : ::::: :::::
CCDS12 CEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 LNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRK
:::.:.::. . .:: :...
CCDS12 LNVSYAPQKVAISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFP
240 250 260 270 280 290
>>CCDS12834.3 SIGLEC6 gene_id:946|Hs108|chr19 (453 aa)
initn: 1372 init1: 861 opt: 1071 Z-score: 1155.8 bits: 222.8 E(32554): 4.7e-58
Smith-Waterman score: 1077; 67.7% identity (80.6% similar) in 248 aa overlap (3-248:13-251)
10 20 30 40
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIP--
: ::::::::::::.. : :. ::.:::::::::::: . .:
CCDS12 MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPAS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 YYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDA
:: .:::: ::: : ::::: :.::::::.:::.:: :: :.:::::: ::
CCDS12 YYG-----YGYWFLEGA----DVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWA
:::::..::::.. ::.: : .:::.: :::::.: :::::: :: .:::::: :.
CCDS12 RRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQ
:::::::::::.::::::::::::.:::: ::::::::.::::::: : ::::: :::::
CCDS12 CEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 LNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRK
:::.:.::. . .:: :...
CCDS12 LNVSYAPQKVAISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFP
240 250 260 270 280 290
>>CCDS54308.1 SIGLEC6 gene_id:946|Hs108|chr19 (389 aa)
initn: 1189 init1: 826 opt: 1036 Z-score: 1119.1 bits: 215.8 E(32554): 5.2e-56
Smith-Waterman score: 1042; 68.5% identity (80.3% similar) in 238 aa overlap (3-238:13-241)
10 20 30 40
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIP--
: ::::::::::::.. : :. ::.:::::::::::: . .:
CCDS54 MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPAS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 YYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDA
:: .:::: ::: : ::::: :.::::::.:::.:: :: :.:::::: ::
CCDS54 YYG-----YGYWFLEGA----DVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWA
:::::..::::.. ::.: : .:::.: :::::.: :::::: :: .:::::: :.
CCDS54 RRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQ
:::::::::::.::::::::::::.:::: ::::::::.::::::: : ::::: :::::
CCDS54 CEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 LNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRK
:::... . :
CCDS54 LNVSWMLRRPPLSTPDAPQKVAISIFQGNSAAFKILQNTSSLPVLEGQALRLLCDADGNP
240 250 260 270 280 290
>>CCDS12835.3 SIGLEC6 gene_id:946|Hs108|chr19 (437 aa)
initn: 1333 init1: 817 opt: 1028 Z-score: 1109.8 bits: 214.2 E(32554): 1.7e-55
Smith-Waterman score: 1077; 52.2% identity (65.0% similar) in 383 aa overlap (3-313:13-385)
10 20 30 40
pF1KE1 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIP--
: ::::::::::::.. : :. ::.:::::::::::: . .:
CCDS12 MQGAQEASASEMLPLLLPLLWAGALAQERRFQLEGPESLTVQEGLCVLVPCRLPTTLPAS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 YYDKNSPVHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDA
:: .:::: ::: : ::::: :.::::::.:::.:: :: :.:::::: ::
CCDS12 YYG-----YGYWFLEGA----DVPVATNDPDEEVQEETRGRFHLLWDPRRKNCSLSIRDA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RRRDNGSYFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWA
:::::..::::.. ::.: : .:::.: :::::.: :::::: :: .:::::: :.
CCDS12 RRRDNAAYFFRLKSKWMKYGYTSSKLSVRVMALTHRPNISIPGTLESGHPSNLTCSVPWV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQ
:::::::::::.::::::::::::.:::: ::::::::.::::::: : ::::: :::::
CCDS12 CEQGTPPIFSWMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTIQ
180 190 200 210 220 230
230 240
pF1KE1 LNVTY---------VP--------------QNP-------------------TTGIF--P
:::. .: :: .::.. :
CCDS12 LNVSSFKILQNTSSLPVLEGQALRLLCDADGNPPAHLSWFQGFPALNATPISNTGVLELP
240 250 260 270 280 290
250 260 270
pF1KE1 GDGSG--------------------------KQETRAGVVHGAIGGAGVTALLALCLCLI
::. : : ::: : ::. ::..:.:. ::.:.:
CCDS12 QVGSAEEGDFTCRAQHPLGSLQISLSLFVHWKPEGRAGGVLGAVWGASITTLVFLCVCFI
300 310 320 330 340 350
280 290 300 310 320 330
pF1KE1 FFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEEL
: :::.:.:::. . . .:..:. :.: ::..
CCDS12 FR-VKTRRKKAAQPVQNTDDVNPVMVSGSRGHQHQFQTGIVSDHPAEAGPISEDEQELHY
360 370 380 390 400 410
340 350 360
pF1KE1 HYASLNFHGMNPSKDTSTEYSEVRTQ
CCDS12 AVLHFHKVQPQEPKVTDTEYSEIKIHK
420 430
>>CCDS12825.1 SIGLEC9 gene_id:27180|Hs108|chr19 (463 aa)
initn: 1248 init1: 857 opt: 998 Z-score: 1077.2 bits: 208.3 E(32554): 1.1e-53
Smith-Waterman score: 998; 61.3% identity (78.2% similar) in 248 aa overlap (3-248:2-249)
10 20 30 40 50
pF1KE1 MPLLLLLPLLWAGALAM-DPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPV-HG
:::::::::. : . . : .: :::::::::: :::.: .: . .:: ::
CCDS12 MLLLLLPLLWGRERAEGQTSKLLTMQSSVTVQEGLCVHVPCSFSYPSHGWIYPGPVVHG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 YWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFF
::::::: . :.:::::. . : :::. ::.::::: .::.::: :::: : : :::
CCDS12 YWFREGANTDQDAPVATNNPARAVWEETRDRFHLLGDPHTKNCTLSIRDARRSDAGRYFF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 RMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFS
:::.:: :..:: .:::.:: :::::.:::::::: : .:::::: :::::::::..:
CCDS12 RMEKGSIKWNYKHHRLSVNVTALTHRPNILIPGTLESGCPQNLTCSVPWACEQGTPPMIS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 WLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNP
:.... . : : ::.:::: . :.::::::.::::: : ::.:::..:..:::.: :::
CCDS12 WIGTSVSPLDPSTTRSSVLTLIPQPQDHGTSLTCQVTFPGASVTTNKTVHLNVSYPPQNL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 TTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRND
: .: :::.
CCDS12 TMTVFQGDGTVSTVLGNGSSLSLPEGQSLRLVCAVDAVDSNPPARLSLSWRGLTLCPSQP
240 250 260 270 280 290
>>CCDS12826.1 SIGLEC7 gene_id:27036|Hs108|chr19 (467 aa)
initn: 1200 init1: 942 opt: 998 Z-score: 1077.1 bits: 208.3 E(32554): 1.1e-53
Smith-Waterman score: 998; 59.7% identity (76.7% similar) in 253 aa overlap (1-248:1-253)
10 20 30 40 50
pF1KE1 MPLLLLLPLLWA-----GALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSP
: :::::::::. : . .. : .: :::::::.:: : :.: .:. ..:
CCDS12 MLLLLLLPLLWGRERVEGQKSNRKDYSLTMQSSVTVQEGMCVHVRCSFSYPVDSQTDSDP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 VHGYWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGS
::::::: : :: .:::::. :::::. ::.:::::. .::.::: ::: : :
CCDS12 VHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAGR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 YFFRMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPP
::::::.:. :..:: ::::.:: :::::.:::::::: : .:::::: :::::::::
CCDS12 YFFRMEKGNIKWNYKYDQLSVNVTALTHRPNILIPGTLESGCFQNLTCSVPWACEQGTPP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 IFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVP
..::.... . : : ::.:::: . :.:: :::.::::: . ::::::.:::::::.: :
CCDS12 MISWMGTSVSPLHPSTTRSSVLTLIPQPQHHGTSLTCQVTLPGAGVTTNRTIQLNVSYPP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 QNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVG
:: :. .: :.:.
CCDS12 QNLTVTVFQGEGTASTALGNSSSLSVLEGQSLRLVCAVDSNPPARLSWTWRSLTLYPSQP
250 260 270 280 290 300
>>CCDS56100.1 SIGLEC9 gene_id:27180|Hs108|chr19 (479 aa)
initn: 1186 init1: 857 opt: 998 Z-score: 1077.0 bits: 208.3 E(32554): 1.1e-53
Smith-Waterman score: 998; 61.3% identity (78.2% similar) in 248 aa overlap (3-248:2-249)
10 20 30 40 50
pF1KE1 MPLLLLLPLLWAGALAM-DPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPV-HG
:::::::::. : . . : .: :::::::::: :::.: .: . .:: ::
CCDS56 MLLLLLPLLWGRERAEGQTSKLLTMQSSVTVQEGLCVHVPCSFSYPSHGWIYPGPVVHG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 YWFREGAIISGDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFF
::::::: . :.:::::. . : :::. ::.::::: .::.::: :::: : : :::
CCDS56 YWFREGANTDQDAPVATNNPARAVWEETRDRFHLLGDPHTKNCTLSIRDARRSDAGRYFF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 RMERGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFS
:::.:: :..:: .:::.:: :::::.:::::::: : .:::::: :::::::::..:
CCDS56 RMEKGSIKWNYKHHRLSVNVTALTHRPNILIPGTLESGCPQNLTCSVPWACEQGTPPMIS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 WLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNP
:.... . : : ::.:::: . :.::::::.::::: : ::.:::..:..:::.: :::
CCDS56 WIGTSVSPLDPSTTRSSVLTLIPQPQDHGTSLTCQVTFPGASVTTNKTVHLNVSYPPQNL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 TTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRND
: .: :::.
CCDS56 TMTVFQGDGTVSTVLGNGSSLSLPEGQSLRLVCAVDAVDSNPPARLSLSWRGLTLCPSQP
240 250 260 270 280 290
364 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:20:39 2016 done: Mon Nov 7 00:20:40 2016
Total Scan time: 2.910 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]