Result of FASTA (ccds) for
pFN21AE1419
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1419, 277 aa
1>>>pF1KE1419 277 - 277 aa - 277 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3415+/-0.00086; mu= 11.5091+/- 0.052
mean_var=131.6929+/-25.560, 0's: 0 Z-trim(112.2): 49 B-trim: 25 in 1/50
Lambda= 0.111762
statistics sampled from 12961 (13010) to 12961 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.4), width: 16
Scan time: 2.440
The best scores are: opt bits E(32554)
CCDS13393.1 CD40 gene_id:958|Hs108|chr20 ( 277) 1987 331.2 5.1e-91
CCDS13394.1 CD40 gene_id:958|Hs108|chr20 ( 203) 1246 211.5 3.8e-55
CCDS74227.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 263) 548 99.1 3.5e-21
CCDS74228.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 337) 548 99.2 4.1e-21
CCDS11980.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 616) 548 99.5 6.3e-21
CCDS59324.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 299) 537 97.4 1.3e-20
CCDS145.1 TNFRSF1B gene_id:7133|Hs108|chr1 ( 461) 429 80.2 3.1e-15
CCDS59233.1 LTBR gene_id:4055|Hs108|chr12 ( 416) 412 77.4 1.9e-14
CCDS8544.1 LTBR gene_id:4055|Hs108|chr12 ( 435) 412 77.4 2e-14
CCDS44046.1 TNFRSF14 gene_id:8764|Hs108|chr1 ( 283) 381 72.2 4.6e-13
CCDS6326.1 TNFRSF11B gene_id:4982|Hs108|chr8 ( 401) 370 70.6 2e-12
>>CCDS13393.1 CD40 gene_id:958|Hs108|chr20 (277 aa)
initn: 1987 init1: 1987 opt: 1987 Z-score: 1747.5 bits: 331.2 E(32554): 5.1e-91
Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)
10 20 30 40 50 60
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQEINFPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQEINFPD
190 200 210 220 230 240
250 260 270
pF1KE1 DLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ
:::::::::::::::::::::::::::::::::::::
CCDS13 DLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ
250 260 270
>>CCDS13394.1 CD40 gene_id:958|Hs108|chr20 (203 aa)
initn: 1243 init1: 1243 opt: 1246 Z-score: 1103.5 bits: 211.5 E(32554): 3.8e-55
Smith-Waterman score: 1246; 89.9% identity (91.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN
::::::::::::::::::::::::::::::::::::::::::::: . .
CCDS13 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTRSPGSAESPGGDPHH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQEINFPD
: :: :
CCDS13 LRDPVCHPLGAGLYQKGGQEANQ
190 200
>>CCDS74227.1 TNFRSF11A gene_id:8792|Hs108|chr18 (263 aa)
initn: 525 init1: 287 opt: 548 Z-score: 493.9 bits: 99.1 E(32554): 3.5e-21
Smith-Waterman score: 548; 37.4% identity (63.9% similar) in 230 aa overlap (4-226:14-241)
10 20 30 40 50
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSD
: : :.: . : .:.. :: . ::.: ..::. :.::. . :
CCDS74 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTS-EKHYEHLGRCCNKCEPGKYMSSK
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 CTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH
:: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.:
CCDS74 CTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 CTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETK
:. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.:
CCDS74 -WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 DLVVQQAGTNKTDVVCGPQDRLRA-----LVVIP-IIFGILFA-ILLVLVFIKKVAKKPT
:.. ::.:.:.::. . : : .: .:. .::: . :: ..: : .
CCDS74 GKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKK
180 190 200 210 220 230
230 240 250 260 270
pF1KE1 NKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ
.::
CCDS74 GKALTANLWHWINEACGRLSGDKEM
240 250 260
>>CCDS74228.1 TNFRSF11A gene_id:8792|Hs108|chr18 (337 aa)
initn: 525 init1: 287 opt: 548 Z-score: 492.5 bits: 99.2 E(32554): 4.1e-21
Smith-Waterman score: 548; 37.4% identity (63.9% similar) in 230 aa overlap (4-226:14-241)
10 20 30 40 50
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSD
: : :.: . : .:.. :: . ::.: ..::. :.::. . :
CCDS74 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTS-EKHYEHLGRCCNKCEPGKYMSSK
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 CTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH
:: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.:
CCDS74 CTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 CTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETK
:. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.:
CCDS74 -WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 DLVVQQAGTNKTDVVCGPQDRLRA-----LVVIP-IIFGILFA-ILLVLVFIKKVAKKPT
:.. ::.:.:.::. . : : .: .:. .::: . :: ..: : .
CCDS74 GKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKK
180 190 200 210 220 230
230 240 250 260 270
pF1KE1 NKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ
.::
CCDS74 GKALTGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQTSQEGAAAAAEPMGRPVQEETLAR
240 250 260 270 280 290
>>CCDS11980.1 TNFRSF11A gene_id:8792|Hs108|chr18 (616 aa)
initn: 525 init1: 287 opt: 548 Z-score: 489.2 bits: 99.5 E(32554): 6.3e-21
Smith-Waterman score: 548; 37.4% identity (63.9% similar) in 230 aa overlap (4-226:14-241)
10 20 30 40 50
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSD
: : :.: . : .:.. :: . ::.: ..::. :.::. . :
CCDS11 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTS-EKHYEHLGRCCNKCEPGKYMSSK
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 CTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH
:: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.:
CCDS11 CTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 CTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETK
:. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.:
CCDS11 -WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 DLVVQQAGTNKTDVVCGPQDRLRA-----LVVIP-IIFGILFA-ILLVLVFIKKVAKKPT
:.. ::.:.:.::. . : : .: .:. .::: . :: ..: : .
CCDS11 GKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKK
180 190 200 210 220 230
230 240 250 260 270
pF1KE1 NKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ
.::
CCDS11 GKALTANLWHWINEACGRLSGDKESSGDSCVSTHTANFGQQGACEGVLLLTLEEKTFPED
240 250 260 270 280 290
>>CCDS59324.1 TNFRSF11A gene_id:8792|Hs108|chr18 (299 aa)
initn: 516 init1: 287 opt: 537 Z-score: 483.6 bits: 97.4 E(32554): 1.3e-20
Smith-Waterman score: 539; 31.1% identity (60.6% similar) in 289 aa overlap (4-269:14-299)
10 20 30 40
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACR-EKQYLINSQCCSLCQPGQKLVS
: : :.: . : .:.. :: : ::.: ..::. :.::. . :
CCDS59 MAPRARRRRPLFALLLLCALLARLQVALQIAPP--CTSEKHYEHLGRCCNKCEPGKYMSS
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 DCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGW
:: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.
CCDS59 KCTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 HCTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCET
: :. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.:
CCDS59 H-WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTF
120 130 140 150 160 170
170 180 190 200 210
pF1KE1 KDLVVQQAGTNKTDVVCG--------PQDRLRALVVIPIIFG---ILFAILLVLVFIKKV
:.. ::.:.:.::. :. . . .: . . : ...:.....
CCDS59 LGKRVEHHGTEKSDAVCSSSLPARKPPNGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQT
180 190 200 210 220 230
220 230 240 250 260
pF1KE1 AKKPTNKAPHPKQEP-QEINFP--DDLPGSNTAAP--------VQETLHGCQPVTQEDGK
... . : .: .: :: .. :.. :.. : ..: .. .:: .. :
CCDS59 SQEGAAAAAEPMGRPVQEETLARRDSFAGNGPRFPDPCGGPEGLREPEKASRPVQEQGGA
240 250 260 270 280 290
270
pF1KE1 ESRISVQERQ
..
CCDS59 KA
>>CCDS145.1 TNFRSF1B gene_id:7133|Hs108|chr1 (461 aa)
initn: 340 init1: 167 opt: 429 Z-score: 387.1 bits: 80.2 E(32554): 3.1e-15
Smith-Waterman score: 429; 35.1% identity (61.7% similar) in 188 aa overlap (15-195:29-209)
10 20 30 40
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINS--QCCSLCQPG
.: ::: ..:: ..: .. .::: :.::
CCDS14 MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 QKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQ-HKYCDPNLGLRVQ-QKGTSETDTI
:. ::. ..: : : .: . . :: .: . . :. . .:. : : : . :
CCDS14 QHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSD---QVETQACTREQNRI
70 80 90 100 110
110 120 130 140 150
pF1KE1 CTCEEGWHCT---SEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFE
:::. ::.:. .:.:. :. :.: ::::: . .: .::..:.:: : :::..:. .
CCDS14 CTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTD
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE1 KCHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVA
:.: :. :: :. . :.:: . :..
CCDS14 ICRPHQICN----VVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE1 KKPTNKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ
CCDS14 STAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLC
240 250 260 270 280 290
>>CCDS59233.1 LTBR gene_id:4055|Hs108|chr12 (416 aa)
initn: 351 init1: 173 opt: 412 Z-score: 372.8 bits: 77.4 E(32554): 1.9e-14
Smith-Waterman score: 441; 30.4% identity (54.4% similar) in 283 aa overlap (22-263:15-296)
10 20 30 40 50
pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTA-----CR--EKQYLINSQ--CCSLCQPGQKLVSDC
:: : :: ::.: .. ::: : :: . . :
CCDS59 MEATGISLASQLKVPPYASENQTCRDQEKEYYEPQHRICCSRCPPGTYVSAKC
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 TEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHC
... .: : :.:. . . :: : :. . ::: .::. ::. : : :. : :
CCDS59 SRIRDTVCATCAENSYNEHWNYLTICQLCRPCDPVMGLEEIAPCTSKRKTQCRCQPGMFC
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 TSEA--CESCVLHRSCSPGFGVK-QIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCE
.. : : : : .: :: .. . .: ... : :: .: :.:.:: .:.: : ::
CCDS59 AAWALECTHCELLSDCPPGTEAELKDEVGKGNNHCVPCKAGHFQNTSSPSARCQPHTRCE
120 130 140 150 160 170
170 180 190 200 210
pF1KE1 TKDLVVQQAGTNKTDVVCG------PQDRLRALVVIPIIFGILFAILLVLVF--IKK---
.. :: :: ..:..: : . ..... ... . : .::. :: : :
CCDS59 NQGLVEAAPGTAQSDTTCKNPLEPLPPEMSGTMLMLAVLLPLAFFLLLATVFSCIWKSHP
180 190 200 210 220 230
220 230 240 250
pF1KE1 ---------VAKKPTNKAPHP---KQEPQEIN--FPDD----LPGSNTAAPVQETLHGCQ
. ..: ...:.: . :: . . ::: :: :. ..::. : .
CCDS59 SLCRKLGSLLKRRPQGEGPNPVAGSWEPPKAHPYFPDLVQPLLPISGDVSPVSTGLPAA-
240 250 260 270 280 290
260 270
pF1KE1 PVTQEDGKESRISVQERQ
:: .
CCDS59 PVLEAGVPQQQSPLDLTREPQLEPGEQSQVAHGTNGIHVTGGSMTITGNIYIYNGPVLGG
300 310 320 330 340 350
>>CCDS8544.1 LTBR gene_id:4055|Hs108|chr12 (435 aa)
initn: 318 init1: 173 opt: 412 Z-score: 372.6 bits: 77.4 E(32554): 2e-14
Smith-Waterman score: 461; 30.8% identity (55.3% similar) in 302 aa overlap (5-263:16-315)
10 20 30
pF1KE1 MVRLPLQCVLWGCLLTAVHPE--PPTA-----CR--EKQYLINSQ--CC
:: :.: ::.: .:. :: : :: ::.: .. ::
CCDS85 MLLPWATSAPGLAWGPLVLGLFG-LLAASQPQAVPPYASENQTCRDQEKEYYEPQHRICC
10 20 30 40 50
40 50 60 70 80 90
pF1KE1 SLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSE
: : :: . . :... .: : :.:. . . :: : :. . ::: .::. ::.
CCDS85 SRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCRPCDPVMGLEEIAPCTSK
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE1 TDTICTCEEGWHCTSEA--CESCVLHRSCSPGFGVK-QIATGVSDTICEPCPVGFFSNVS
: : :. : :.. : : : : .: :: .. . .: ... : :: .: :.:.:
CCDS85 RKTQCRCQPGMFCAAWALECTHCELLSDCPPGTEAELKDEVGKGNNHCVPCKAGHFQNTS
120 130 140 150 160 170
160 170 180 190 200
pF1KE1 SAFEKCHPWTSCETKDLVVQQAGTNKTDVVCG------PQDRLRALVVIPIIFGILFAIL
: .:.: : ::.. :: :: ..:..: : . ..... ... . : .:
CCDS85 SPSARCQPHTRCENQGLVEAAPGTAQSDTTCKNPLEPLPPEMSGTMLMLAVLLPLAFFLL
180 190 200 210 220 230
210 220 230 240
pF1KE1 LVLVF----------IKKVA----KKPTNKAPHP---KQEPQEIN--FPDD----LPGSN
:. :: .:.. ..: ...:.: . :: . . ::: :: :.
CCDS85 LATVFSCIWKSHPSLCRKLGSLLKRRPQGEGPNPVAGSWEPPKAHPYFPDLVQPLLPISG
240 250 260 270 280 290
250 260 270
pF1KE1 TAAPVQETLHGCQPVTQEDGKESRISVQERQ
..::. : . :: .
CCDS85 DVSPVSTGLPAA-PVLEAGVPQQQSPLDLTREPQLEPGEQSQVAHGTNGIHVTGGSMTIT
300 310 320 330 340 350
>>CCDS44046.1 TNFRSF14 gene_id:8764|Hs108|chr1 (283 aa)
initn: 269 init1: 269 opt: 381 Z-score: 347.9 bits: 72.2 E(32554): 4.6e-13
Smith-Waterman score: 381; 31.9% identity (61.0% similar) in 182 aa overlap (6-182:21-197)
10 20 30 40
pF1KE1 MVRLPLQCVLWGCLLTA--VHPEPPTACREKQYLINSQCCSLCQP
:. ::. .: : : :. :.: .: ..:.:: :.:
CCDS44 MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPS-CKEDEYPVGSECCPKCSP
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 GQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTIC
: .. : :.: : : :: . .. : ..: : ..::: .:::.... . ...:
CCDS44 GYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 TCEEGWHCT---SEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK
: : : .. : .: . . ::: :.. .: .::.:. :: : :: ....:.
CCDS44 GCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSP-NGTLEE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 CHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAK
:. :.: . .: .::.. .
CCDS44 CQHQTKC---SWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVV
180 190 200 210 220 230
277 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:41:32 2016 done: Mon Nov 7 01:41:32 2016
Total Scan time: 2.440 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]