Result of FASTA (omim) for
pFN21AE1408
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1408, 147 aa
1>>>pF1KE1408 147 - 147 aa - 147 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0044+/-0.000303; mu= 13.2189+/- 0.019
mean_var=61.3787+/-12.666, 0's: 0 Z-trim(116.4): 31 B-trim: 1484 in 1/55
Lambda= 0.163706
statistics sampled from 27504 (27535) to 27504 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.323), width: 16
Scan time: 5.220
The best scores are: opt bits E(85289)
NP_002003 (OMIM: 601153) bis(5'-adenosyl)-triphosp ( 147) 996 243.1 1.2e-64
NP_001307829 (OMIM: 601153) bis(5'-adenosyl)-triph ( 147) 996 243.1 1.2e-64
NP_001307828 (OMIM: 601153) bis(5'-adenosyl)-triph ( 147) 996 243.1 1.2e-64
NP_001159715 (OMIM: 601153) bis(5'-adenosyl)-triph ( 147) 996 243.1 1.2e-64
XP_016861371 (OMIM: 601153) PREDICTED: bis(5'-aden ( 213) 628 156.3 2.4e-38
XP_016861373 (OMIM: 601153) PREDICTED: bis(5'-aden ( 179) 627 156.0 2.5e-38
XP_016861372 (OMIM: 601153) PREDICTED: bis(5'-aden ( 194) 627 156.0 2.7e-38
XP_016861369 (OMIM: 601153) PREDICTED: bis(5'-aden ( 218) 627 156.0 2.9e-38
XP_016861370 (OMIM: 601153) PREDICTED: bis(5'-aden ( 218) 627 156.0 2.9e-38
NP_001307830 (OMIM: 601153) bis(5'-adenosyl)-triph ( 91) 586 146.1 1.2e-35
>>NP_002003 (OMIM: 601153) bis(5'-adenosyl)-triphosphata (147 aa)
initn: 996 init1: 996 opt: 996 Z-score: 1281.4 bits: 243.1 E(85289): 1.2e-64
Smith-Waterman score: 996; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
:::::::::::::::::::::::::::
NP_002 DKEDFPASWRSEEEMAAEAAALRVYFQ
130 140
>>NP_001307829 (OMIM: 601153) bis(5'-adenosyl)-triphosph (147 aa)
initn: 996 init1: 996 opt: 996 Z-score: 1281.4 bits: 243.1 E(85289): 1.2e-64
Smith-Waterman score: 996; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
:::::::::::::::::::::::::::
NP_001 DKEDFPASWRSEEEMAAEAAALRVYFQ
130 140
>>NP_001307828 (OMIM: 601153) bis(5'-adenosyl)-triphosph (147 aa)
initn: 996 init1: 996 opt: 996 Z-score: 1281.4 bits: 243.1 E(85289): 1.2e-64
Smith-Waterman score: 996; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
:::::::::::::::::::::::::::
NP_001 DKEDFPASWRSEEEMAAEAAALRVYFQ
130 140
>>NP_001159715 (OMIM: 601153) bis(5'-adenosyl)-triphosph (147 aa)
initn: 996 init1: 996 opt: 996 Z-score: 1281.4 bits: 243.1 E(85289): 1.2e-64
Smith-Waterman score: 996; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
:::::::::::::::::::::::::::
NP_001 DKEDFPASWRSEEEMAAEAAALRVYFQ
130 140
>>XP_016861371 (OMIM: 601153) PREDICTED: bis(5'-adenosyl (213 aa)
initn: 644 init1: 625 opt: 628 Z-score: 809.3 bits: 156.3 E(85289): 2.4e-38
Smith-Waterman score: 628; 75.6% identity (81.5% similar) in 135 aa overlap (1-135:1-132)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
::::::::::::::::::::::::::::::::: : :. : :.. . .
XP_016 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKVGSFLRPPSTASTF---TSMFFPGRLE
70 80 90 100 110
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
. :: :: ..:
XP_016 TFTGMTASMRSSRNMTRRTFLPLGDQRRKWQQKPQLCGSTFSDTGKDCISSLPRPSRGPQ
120 130 140 150 160 170
>>XP_016861373 (OMIM: 601153) PREDICTED: bis(5'-adenosyl (179 aa)
initn: 639 init1: 626 opt: 627 Z-score: 809.1 bits: 156.0 E(85289): 2.5e-38
Smith-Waterman score: 627; 92.2% identity (95.1% similar) in 102 aa overlap (1-102:1-102)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
:::::::::::::::::::::::::::::::::. .: .
XP_016 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKQQICTILDKIVRRDEQSTFTSMFFPGR
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
XP_016 LETFTGMTASMRSSRNMTRRTFLPLGDQRRKWQQKPQLCGSTFSDTDPEFQQKSYCQPV
130 140 150 160 170
>>XP_016861372 (OMIM: 601153) PREDICTED: bis(5'-adenosyl (194 aa)
initn: 639 init1: 626 opt: 627 Z-score: 808.6 bits: 156.0 E(85289): 2.7e-38
Smith-Waterman score: 627; 92.2% identity (95.1% similar) in 102 aa overlap (1-102:1-102)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
:::::::::::::::::::::::::::::::::. .: .
XP_016 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKQQICTILDKIVRRDEQSTFTSMFFPGR
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
XP_016 LETFTGMTASMRSSRNMTRRTFLPLGDQRRKWQQKPQLCGSTFSDTDVFQILNSSKRAIA
130 140 150 160 170 180
>>XP_016861369 (OMIM: 601153) PREDICTED: bis(5'-adenosyl (218 aa)
initn: 645 init1: 626 opt: 627 Z-score: 807.9 bits: 156.0 E(85289): 2.9e-38
Smith-Waterman score: 627; 92.2% identity (95.1% similar) in 102 aa overlap (1-102:1-102)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
:::::::::::::::::::::::::::::::::. .: .
XP_016 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKQQICTILDKIVRRDEQSTFTSMFFPGR
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
XP_016 LETFTGMTASMRSSRNMTRRTFLPLGDQRRKWQQKPQLCGSTFSDTGKDCISSLPRPSRG
130 140 150 160 170 180
>>XP_016861370 (OMIM: 601153) PREDICTED: bis(5'-adenosyl (218 aa)
initn: 645 init1: 626 opt: 627 Z-score: 807.9 bits: 156.0 E(85289): 2.9e-38
Smith-Waterman score: 627; 92.2% identity (95.1% similar) in 102 aa overlap (1-102:1-102)
10 20 30 40 50 60
pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH
:::::::::::::::::::::::::::::::::. .: .
XP_016 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKQQICTILDKIVRRDEQSTFTSMFFPGR
70 80 90 100 110 120
130 140
pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ
XP_016 LETFTGMTASMRSSRNMTRRTFLPLGDQRRKWQQKPQLCGSTFSDTGKDCISSLPRPSRG
130 140 150 160 170 180
>>NP_001307830 (OMIM: 601153) bis(5'-adenosyl)-triphosph (91 aa)
initn: 586 init1: 586 opt: 586 Z-score: 761.1 bits: 146.1 E(85289): 1.2e-35
Smith-Waterman score: 586; 100.0% identity (100.0% similar) in 87 aa overlap (61-147:5-91)
40 50 60 70 80 90
pF1KE1 VVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQ
::::::::::::::::::::::::::::::
NP_001 MNCLTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQ
10 20 30
100 110 120 130 140
pF1KE1 TVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKEDFPASWRSEEEMAAEAAALRVYFQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKEDFPASWRSEEEMAAEAAALRVYFQ
40 50 60 70 80 90
147 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:23:43 2016 done: Sun Nov 6 22:23:44 2016
Total Scan time: 5.220 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]