Result of FASTA (ccds) for
pFN21AE1379
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1379, 253 aa
1>>>pF1KE1379 253 - 253 aa - 253 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4329+/-0.000878; mu= 19.7760+/- 0.052
mean_var=65.5130+/-12.675, 0's: 0 Z-trim(106.2): 48 B-trim: 0 in 0/48
Lambda= 0.158457
statistics sampled from 8806 (8854) to 8806 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.272), width: 16
Scan time: 2.090
The best scores are: opt bits E(32554)
CCDS7719.1 CD151 gene_id:977|Hs108|chr11 ( 253) 1709 399.2 1.4e-111
CCDS31765.1 TSPAN11 gene_id:441631|Hs108|chr12 ( 253) 993 235.6 2.6e-62
CCDS10292.1 TSPAN3 gene_id:10099|Hs108|chr15 ( 253) 460 113.7 1.2e-25
CCDS7910.1 TSPAN18 gene_id:90139|Hs108|chr11 ( 248) 455 112.6 2.7e-25
CCDS14248.1 TSPAN7 gene_id:7102|Hs108|chrX ( 249) 448 111.0 8.1e-25
CCDS7721.1 TSPAN4 gene_id:7106|Hs108|chr11 ( 238) 416 103.6 1.3e-22
CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12 ( 239) 416 103.6 1.3e-22
CCDS14470.1 TSPAN6 gene_id:7105|Hs108|chrX ( 245) 398 99.5 2.2e-21
CCDS8999.1 TSPAN8 gene_id:7103|Hs108|chr12 ( 237) 361 91.0 7.6e-19
CCDS829.1 CD53 gene_id:963|Hs108|chr1 ( 219) 355 89.6 1.9e-18
CCDS8540.1 CD9 gene_id:928|Hs108|chr12 ( 228) 349 88.3 5e-18
CCDS7294.1 TSPAN15 gene_id:23555|Hs108|chr10 ( 294) 342 86.8 1.8e-17
CCDS7909.1 CD82 gene_id:3732|Hs108|chr11 ( 267) 339 86.1 2.7e-17
CCDS12760.1 CD37 gene_id:951|Hs108|chr19 ( 281) 329 83.8 1.4e-16
CCDS53963.1 TSPAN3 gene_id:10099|Hs108|chr15 ( 189) 317 80.9 6.9e-16
CCDS530.1 TSPAN1 gene_id:10103|Hs108|chr1 ( 241) 318 81.2 7e-16
CCDS47346.2 TSPAN17 gene_id:26262|Hs108|chr5 ( 263) 317 81.0 8.8e-16
CCDS54952.1 TSPAN17 gene_id:26262|Hs108|chr5 ( 329) 317 81.1 1e-15
CCDS34298.1 TSPAN17 gene_id:26262|Hs108|chr5 ( 332) 307 78.8 5e-15
CCDS3646.1 TSPAN5 gene_id:10098|Hs108|chr4 ( 268) 298 76.7 1.8e-14
CCDS5810.1 TSPAN33 gene_id:340348|Hs108|chr7 ( 283) 291 75.1 5.7e-14
CCDS7369.1 TSPAN14 gene_id:81619|Hs108|chr10 ( 270) 289 74.6 7.5e-14
CCDS7734.1 CD81 gene_id:975|Hs108|chr11 ( 236) 286 73.9 1.1e-13
CCDS8890.1 CD63 gene_id:967|Hs108|chr12 ( 238) 283 73.2 1.8e-13
CCDS58243.1 CD63 gene_id:967|Hs108|chr12 ( 215) 282 72.9 1.9e-13
CCDS881.1 TSPAN2 gene_id:10100|Hs108|chr1 ( 221) 282 73.0 2e-13
CCDS58242.1 CD63 gene_id:967|Hs108|chr12 ( 156) 280 72.4 2.1e-13
CCDS77130.1 TSPAN10 gene_id:83882|Hs108|chr17 ( 393) 284 73.7 2.2e-13
CCDS44949.1 TSPAN19 gene_id:144448|Hs108|chr12 ( 248) 272 70.7 1e-12
CCDS41589.1 TSPAN4 gene_id:7106|Hs108|chr11 ( 174) 257 67.1 8.8e-12
CCDS62549.1 TSPAN16 gene_id:26526|Hs108|chr19 ( 244) 254 66.6 1.8e-11
>>CCDS7719.1 CD151 gene_id:977|Hs108|chr11 (253 aa)
initn: 1709 init1: 1709 opt: 1709 Z-score: 2116.9 bits: 399.2 E(32554): 1.4e-111
Smith-Waterman score: 1709; 100.0% identity (100.0% similar) in 253 aa overlap (1-253:1-253)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 PDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIF
190 200 210 220 230 240
250
pF1KE1 TCCLYRSLKLEHY
:::::::::::::
CCDS77 TCCLYRSLKLEHY
250
>>CCDS31765.1 TSPAN11 gene_id:441631|Hs108|chr12 (253 aa)
initn: 1016 init1: 991 opt: 993 Z-score: 1232.2 bits: 235.6 E(32554): 2.6e-62
Smith-Waterman score: 993; 56.1% identity (81.4% similar) in 253 aa overlap (1-253:1-253)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
:.... .. . ::::::..: ::..: ::.:::::::. :: :.:.:::.:. :.
CCDS31 MAHYKTEQDDWLIIYLKYLLFVFNFFFWVGGAAVLAVGIWTLVEKSGYLSVLASSTFAAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
::::. ::..::::: :: : . ::.. : :: :::.:::.:..::.::..:::.:.
CCDS31 AYILIFAGVLVMVTGFLGFGAILWERKGCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
:::..:. :... : ::: .:..::.:::.:.:::::.: ::. : .: .:: :: :
CCDS31 ELKQHLNRTLAENYGQPGATQITASVDRLQQDFKCCGSNSSADWQHSTYILLREAEGRQV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIF
:::::::::. :::: : ::::::::::.:::: :. .:: ..::::::.::.:. ::..
CCDS31 PDSCCKTVVVRCGQRAHPSNIYKVEGGCLTKLEQFLADHLLLMGAVGIGVACLQICGMVL
190 200 210 220 230 240
250
pF1KE1 TCCLYRSLKLEHY
::::.. :. . :
CCDS31 TCCLHQRLQRHFY
250
>>CCDS10292.1 TSPAN3 gene_id:10099|Hs108|chr15 (253 aa)
initn: 358 init1: 233 opt: 460 Z-score: 573.7 bits: 113.7 E(32554): 1.2e-25
Smith-Waterman score: 460; 29.2% identity (68.2% similar) in 233 aa overlap (11-242:4-231)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
:: . : .: : :: :. . :: ... .:: .. . :
CCDS10 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLIP
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
: .....:..... :..:::::..: : : . :.::..:. :... .:.:.: ....
CCDS10 AVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
:. .... .. : :. . .:.. :.: .:...:::: .: .::....:.. :. .. :
CCDS10 EVDRSIQKVY-KTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFK--ETKNQSV
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 PDSCCKTVVALC-GQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMI
: :::. ... : :. : :..: .:: : . . .:: . . .....: .:..::.
CCDS10 PLSCCRETASNCNGSLAHPSDLY-AEG-CEALVVKKLQEIMMHVIWAALAFAAIQLLGML
180 190 200 210 220
240 250
pF1KE1 FTCCLYRSLKLEHY
.:
CCDS10 CACIVLCRRSRDPAYELLITGGTYA
230 240 250
>>CCDS7910.1 TSPAN18 gene_id:90139|Hs108|chr11 (248 aa)
initn: 450 init1: 180 opt: 455 Z-score: 567.7 bits: 112.6 E(32554): 2.7e-25
Smith-Waterman score: 455; 29.9% identity (68.0% similar) in 244 aa overlap (15-249:8-248)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
:.:::.:..: ..:.: ..:.:::... . . ..:.. : :
CCDS79 MEGDCLSCMKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIVAANPLLLT
10 20 30 40 50
70 80 90 100 110
pF1KE1 -AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLN
::::.. : .... : ::::.. .: . :: ..:...::::: :. :.:::. . ..:.
CCDS79 GAYILLAMGGLLFLLGFLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 TELKENLKDTMTKRYHQPGHEAVTSAV-DQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGR
:. . .::.:. . : ::. .... : ::: :. .:.. . .: ..
CCDS79 REF---FTKELTKHYQGNNDTDVFSATWNSVMITFGCCGVNGPEDFKFASVFRLLTLDSE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 VVPDSCCK----TVVALCGQRDH---ASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIA
::..::. . .. .:.. . ... . :: : . . .. .. . ::..::.
CCDS79 EVPEACCRREPQSRDGVLLSREECLLGRSLFLNKQGCYTVILNTFETYVYLAGALAIGVL
180 190 200 210 220 230
240 250
pF1KE1 CVQVFGMIFTCCLYRSLKLEHY
...:.:::. ::.:...
CCDS79 AIELFAMIFAMCLFRGIQ
240
>>CCDS14248.1 TSPAN7 gene_id:7102|Hs108|chrX (249 aa)
initn: 475 init1: 138 opt: 448 Z-score: 559.0 bits: 111.0 E(32554): 8.1e-25
Smith-Waterman score: 482; 32.9% identity (66.3% similar) in 243 aa overlap (15-253:14-246)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
::: ::. :. ::..:. ..:::.: . ::::.: .. :
CCDS14 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNAP
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
:.:. .::...: :..:: :: . .:.:: ..: ..:: :..::: .... ....
CCDS14 -YVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
. .. :.: . :. :.. . :::..:. . ::: .: .: : .. : : .
CCDS14 TFLRTYTDAM-QTYN--GNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYF--LEHG---I
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 PDSCCKTVVALCGQRD-HASNIY--KV-EGGCITKLETFIQEHLRVIGAVGIGIACVQVF
: ::: . . :. .: : .. :: . :: . .:.. .. .:..:..::: :..
CCDS14 PPSCCMNETD-CNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLI
180 190 200 210 220
240 250
pF1KE1 GMIFTCCLYRSLKLEHY
::...::: : . ..:
CCDS14 GMLLACCLSRFITANQYEMV
230 240
>>CCDS7721.1 TSPAN4 gene_id:7106|Hs108|chr11 (238 aa)
initn: 419 init1: 305 opt: 416 Z-score: 519.7 bits: 103.6 E(32554): 1.3e-22
Smith-Waterman score: 492; 34.2% identity (64.5% similar) in 234 aa overlap (15-245:5-227)
10 20 30 40 50
pF1KE1 MGEFNEKKTTCGTVCL---KYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTY
:: :::.:..: :::.: .:..:::: : .... .: .:
CCDS77 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPS
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 LATAYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQ
:..: .:...:. ::. : .:: ...:: . :: .:.:::..:::: .:: .:: ..
CCDS77 LSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LNTELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGG
.. ...:: . . : :. ..:.: . .: .:.::: .: :: . ..
CCDS77 IDRYAQQDLKKGL-HLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVY-------NA
120 130 140 150 160
180 190 200 210 220 230
pF1KE1 RVVPDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFG
:::::: :: :: . . .. : .....::.: ..: :. : ::..:
CCDS77 TRVPDSCCLEFSESCGL--HAPGTWW-KAPCYETVKVWLQENLLAVGIFGLCTALVQILG
170 180 190 200 210
240 250
pF1KE1 MIFTCCLYRSLKLEHY
. :. .:
CCDS77 LTFAMTMYCQVVKADTYCA
220 230
>>CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12 (239 aa)
initn: 516 init1: 317 opt: 416 Z-score: 519.7 bits: 103.6 E(32554): 1.3e-22
Smith-Waterman score: 503; 33.3% identity (66.7% similar) in 234 aa overlap (15-248:8-230)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
::::..: .: ::: : ....:::: . .... .. : :..
CCDS85 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSA
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
: .... ::.::::: ::: ...:: . :: .::.::.:.: :.: :: ..:....:
CCDS85 ANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
. :..::. . :: .. .. .: . .: :..::: .. :: : .:
CCDS85 NAKKDLKEGLLL-YHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPV-------LGENTV
120 130 140 150 160
190 200 210 220 230 240
pF1KE1 PDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIF
:: :: :: :. .. .... :: :.. ..... .:.:.::. : .:..:: :
CCDS85 PDRCCMENSQGCG-RNATTPLWRT--GCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAF
170 180 190 200 210 220
250
pF1KE1 TCCLYRSLKLEHY
. :.. .
CCDS85 SMTLFQHIHRTGKKYDA
230
>>CCDS14470.1 TSPAN6 gene_id:7105|Hs108|chrX (245 aa)
initn: 486 init1: 154 opt: 398 Z-score: 497.3 bits: 99.5 E(32554): 2.2e-21
Smith-Waterman score: 502; 32.1% identity (71.2% similar) in 240 aa overlap (15-253:16-242)
10 20 30 40 50
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLA
:.: .:. :. ::..:. ..::::: . .:.::: .
CCDS14 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKA-TN
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 TAYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLN
. ..:...:::... :..:: :: . .:.:: ..: ..::.:..:.:..... ....
CCDS14 VPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 TELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRV
. .:.: . .. :.:.. : . . :::..:. .:::: .. .:: :... .: :
CCDS14 NSFKNNYEKAL-KQYNSTG-DYRSHAVDKIQNTLHCCGVTDYRDWTDTNYY--SEKG---
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 VPDSCCKTVVALCG-QRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGM
: :::: . : ::: :... . ::. :. :.:. .. :......:.:: :..:.
CCDS14 FPKSCCK--LEDCTPQRD-ADKVNNE--GCFIKVMTIIESEMGVVAGISFGVACFQLIGI
180 190 200 210 220
240 250
pF1KE1 IFTCCLYRSLKLEHY
... :: :.. ..:
CCDS14 FLAYCLSRAITNNQYEIV
230 240
>>CCDS8999.1 TSPAN8 gene_id:7103|Hs108|chr12 (237 aa)
initn: 335 init1: 184 opt: 361 Z-score: 451.8 bits: 91.0 E(32554): 7.6e-19
Smith-Waterman score: 423; 30.3% identity (66.0% similar) in 241 aa overlap (13-245:5-231)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
..:.:: .::.: ::: :. ..:..:: . ...: ....: ..
CCDS89 MAGVSACIKYSMFTFNFLFWLCGILILALAIW-VRVSNDSQAIFGSEDVGSS
10 20 30 40 50
70 80 90 100 110
pF1KE1 AY----ILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQ
.: ::...:...:. : ::::...:: : .: :.:: ::.:.::.. .:::. .. .
CCDS89 SYVAVDILIAVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 QLNTELKENLKDTMTKRYHQPGH--EAVTSAVDQLQQEFHCCG-SNNSQDWRDSEWIRSQ
. . ..:.: .. :: :. . :. .:.::.::: :.. :: .. :
CCDS89 KSDRIVNETLYEN-TKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNN----FQ
120 130 140 150 160
180 190 200 210 220 230
pF1KE1 EAGGRVVPDSC-CKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIAC
. :. : : : : .....:: ::. .. :. ..: .. ....:.:
CCDS89 H-----YPELCACLDKQRPC-QSYNGKQVYKET--CISFIKDFLAKNLIIVIGISFGLAV
170 180 190 200 210
240 250
pF1KE1 VQVFGMIFTCCLYRSLKLEHY
....:..:. ::
CCDS89 IEILGLVFSMVLYCQIGNK
220 230
>>CCDS829.1 CD53 gene_id:963|Hs108|chr1 (219 aa)
initn: 376 init1: 162 opt: 355 Z-score: 444.8 bits: 89.6 E(32554): 1.9e-18
Smith-Waterman score: 382; 31.0% identity (62.9% similar) in 229 aa overlap (16-244:9-206)
10 20 30 40 50 60
pF1KE1 MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLAT
:::.:: .: ::. : ... ::. : ..... :. . :.
CCDS82 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLL-IHNNFGVLFHNLPSLTL
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 AYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNT
. ..:..:...::.. ::: ...:: . :: .:::::::.: :. .:: ..: :.::
CCDS82 GNVFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVV
. ..: :.. .:::. ... .: :..:. ..::: :...:: ..
CCDS82 YVAKGLTDSI-HRYHSD--NSTKAAWDSIQSFLQCCGINGTSDWTSG-------------
120 130 140 150
190 200 210 220 230 240
pF1KE1 PDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIF
: . : . :. :::: : .: . ... .. :: . : . ..:.:: :
CCDS82 PPASCPS--------DR-----KVEG-CYAKARLWFHSNFLYIGIITICVCVIEVLGMSF
160 170 180 190 200
250
pF1KE1 TCCLYRSLKLEHY
. :
CCDS82 ALTLNCQIDKTSQTIGL
210
253 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:30:21 2016 done: Sun Nov 6 23:30:21 2016
Total Scan time: 2.090 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]