Result of FASTA (ccds) for
pFN21AE1377
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1377, 526 aa
1>>>pF1KE1377 526 - 526 aa - 526 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3821+/-0.00094; mu= 5.9853+/- 0.057
mean_var=190.8544+/-39.602, 0's: 0 Z-trim(112.5): 78 B-trim: 0 in 0/52
Lambda= 0.092837
statistics sampled from 13142 (13216) to 13142 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.406), width: 16
Scan time: 3.580
The best scores are: opt bits E(32554)
CCDS1356.1 NCF2 gene_id:4688|Hs108|chr1 ( 526) 3521 484.0 1.8e-136
CCDS53447.1 NCF2 gene_id:4688|Hs108|chr1 ( 481) 2417 336.1 5.6e-92
CCDS53446.1 NCF2 gene_id:4688|Hs108|chr1 ( 445) 2186 305.1 1.1e-82
CCDS7042.1 NOXA1 gene_id:10811|Hs108|chr9 ( 483) 526 82.8 9.8e-16
>>CCDS1356.1 NCF2 gene_id:4688|Hs108|chr1 (526 aa)
initn: 3521 init1: 3521 opt: 3521 Z-score: 2563.4 bits: 484.0 E(32554): 1.8e-136
Smith-Waterman score: 3521; 99.6% identity (100.0% similar) in 526 aa overlap (1-526:1-526)
10 20 30 40 50 60
pF1KE1 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRAL
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 EGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 IHPQQQPQEESSPQSDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IHPQQQPQEESSPQSDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 TVVMKTQPGLPYSQVRDMVSKKLELRLEQTKLSYRPRDSNELVPLSEDSMKDAWGQVKNY
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS13 TVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLSYRPRDSNELVPLSEDSMKDAWGQVKNY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 CLTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSYEATQPEDLEFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CLTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSYEATQPEDLEFQE
430 440 450 460 470 480
490 500 510 520
pF1KE1 GDIILVLSKVNEEWLEGECKGKVGIFPKVFVEDCATTDLESTRREV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GDIILVLSKVNEEWLEGECKGKVGIFPKVFVEDCATTDLESTRREV
490 500 510 520
>>CCDS53447.1 NCF2 gene_id:4688|Hs108|chr1 (481 aa)
initn: 3207 init1: 2416 opt: 2417 Z-score: 1764.8 bits: 336.1 E(32554): 5.6e-92
Smith-Waterman score: 3121; 91.1% identity (91.4% similar) in 526 aa overlap (1-526:1-481)
10 20 30 40 50 60
pF1KE1 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVG
:: :::::::::::::
CCDS53 CE---------------------------------------------KQKLYEPVVIPVG
130
190 200 210 220 230 240
pF1KE1 RLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRAL
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRAL
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE1 EGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELR
200 210 220 230 240 250
310 320 330 340 350 360
pF1KE1 IHPQQQPQEESSPQSDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IHPQQQPQEESSPQSDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 TVVMKTQPGLPYSQVRDMVSKKLELRLEQTKLSYRPRDSNELVPLSEDSMKDAWGQVKNY
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS53 TVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLSYRPRDSNELVPLSEDSMKDAWGQVKNY
320 330 340 350 360 370
430 440 450 460 470 480
pF1KE1 CLTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSYEATQPEDLEFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CLTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSYEATQPEDLEFQE
380 390 400 410 420 430
490 500 510 520
pF1KE1 GDIILVLSKVNEEWLEGECKGKVGIFPKVFVEDCATTDLESTRREV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GDIILVLSKVNEEWLEGECKGKVGIFPKVFVEDCATTDLESTRREV
440 450 460 470 480
>>CCDS53446.1 NCF2 gene_id:4688|Hs108|chr1 (445 aa)
initn: 2186 init1: 2186 opt: 2186 Z-score: 1598.0 bits: 305.1 E(32554): 1.1e-82
Smith-Waterman score: 2819; 84.4% identity (84.6% similar) in 526 aa overlap (1-526:1-445)
10 20 30 40 50 60
pF1KE1 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVG
:::
CCDS53 CEV---------------------------------------------------------
190 200 210 220 230 240
pF1KE1 RLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRAL
::::::::::::::::::::::::::::::::::::
CCDS53 ------------------------VASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRAL
130 140 150
250 260 270 280 290 300
pF1KE1 EGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELR
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 IHPQQQPQEESSPQSDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IHPQQQPQEESSPQSDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVPMPYTLKVHYKY
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE1 TVVMKTQPGLPYSQVRDMVSKKLELRLEQTKLSYRPRDSNELVPLSEDSMKDAWGQVKNY
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS53 TVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLSYRPRDSNELVPLSEDSMKDAWGQVKNY
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE1 CLTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSYEATQPEDLEFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CLTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSYEATQPEDLEFQE
340 350 360 370 380 390
490 500 510 520
pF1KE1 GDIILVLSKVNEEWLEGECKGKVGIFPKVFVEDCATTDLESTRREV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GDIILVLSKVNEEWLEGECKGKVGIFPKVFVEDCATTDLESTRREV
400 410 420 430 440
>>CCDS7042.1 NOXA1 gene_id:10811|Hs108|chr9 (483 aa)
initn: 703 init1: 526 opt: 526 Z-score: 395.9 bits: 82.8 E(32554): 9.8e-16
Smith-Waterman score: 698; 31.4% identity (53.2% similar) in 528 aa overlap (2-511:3-460)
10 20 30 40 50
pF1KE1 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKA
:: . . :. :. :.:. :: :: ::.: : .:.::: ::.. . . : .:
CCDS70 MASLGDLVRAWHLGAQAVDRGDWARALHLFSGVPAPPARLCFNAGCVHLLAGDPEAALRA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 FTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLF
: .....: .::..::::. .: ... :..:. :: ::::. ::: :::.:::
CCDS70 FDQAVTKDTCMAVGFFQRGVANFQLARFQEALSDFWLALEQLRGHAAIDYTQLGLRFKLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 ACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPV
: :::.:.: . : .: .: : : : . .:.:.. : .. : .:
CCDS70 AWEVLHNVASAQCQLGLWTEAASSLREAMSKWPEGSLNGLDSALDQVQRRGSLPPRQVPR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 GRLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRA
:..:::.. .. .: :.:::: ::::.. .:. : : :::. : . . :.
CCDS70 GEVFRPHRWHLKHLEPVDFLGKAKVVASAIPDDQGWGVRPQQPQG------PGANHDARS
190 200 210 220 230
240 250 260 270 280 290
pF1KE1 LEGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVEL
: .. :. : : .: : : ... ..
CCDS70 LIMDSPRAGTHQGP-LDAETEV-----------GADRCTSTAYQ----------------
240 250 260
300 310 320 330 340 350
pF1KE1 RIHPQQQPQEESSPQSDIPAPPSSKAPGRPQLS-PGQKQKEEPKEVKL-----SVPMPYT
.:.:: : : :: : :: : .. :: :.: . : :. :
CCDS70 ----EQRPQVE---QVGKQAPLS---PGLPAMGGPGPGPCEDPAGAGGAGAGGSEPL-VT
270 280 290 300 310
360 370 380 390 400 410
pF1KE1 LKVHYKYTVVMKTQPGLPYSQVRDMVSKKLELRLEQTKLSY-RPRDSNELVPLSED-SMK
. :. .::..... : :..: .... : . . .::: : .... ::. :. :..
CCDS70 VTVQCAFTVALRARRGADLSSLRALLGQALPHQAQLGQLSYLAPGEDGHWVPIPEEESLQ
320 330 340 350 360 370
420 430 440 450 460
pF1KE1 DAWGQVKNYC---LTLWCENTVGDQGFPDEPKESEKADANNQTTEPQLKKGSQVEALFSY
:: : : : : :... : .: : :: : ::
CCDS70 RAW-QDAAACPRGLQLQCRGAGG---------------------RPVL---YQVVAQHSY
380 390 400 410
470 480 490 500 510 520
pF1KE1 EATQPEDLEFQEGDIILVLSK-------VNEEWLEGECKGKVGIFPKVFVEDCATTDLES
: :::: :..:: . :: . :.. ::::.: :..::::: ::
CCDS70 SAQGPEDLGFRQGDTVDVLCEEPDVPLAVDQAWLEGHCDGRIGIFPKCFVVPAGPRMSGA
420 430 440 450 460 470
pF1KE1 TRREV
CCDS70 PGRLPRSQQGDQP
480
526 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:49:34 2016 done: Mon Nov 7 02:49:35 2016
Total Scan time: 3.580 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]