Result of FASTA (omim) for
pFN21AE1375
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1375, 212 aa
1>>>pF1KE1375 212 - 212 aa - 212 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2798+/-0.000461; mu= 10.4426+/- 0.029
mean_var=106.6179+/-21.483, 0's: 0 Z-trim(110.9): 19 B-trim: 156 in 1/54
Lambda= 0.124211
statistics sampled from 19408 (19419) to 19408 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.584), E-opt: 0.2 (0.228), width: 16
Scan time: 5.600
The best scores are: opt bits E(85289)
XP_016861133 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
XP_005247143 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
XP_005247145 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
XP_006713548 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
NP_665858 (OMIM: 603285,609118) programmed cell de ( 212) 1320 247.1 1.6e-65
NP_665859 (OMIM: 603285,609118) programmed cell de ( 212) 1320 247.1 1.6e-65
NP_009148 (OMIM: 603285,609118) programmed cell de ( 212) 1320 247.1 1.6e-65
XP_011510671 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
XP_005247144 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
XP_011510670 (OMIM: 603285,609118) PREDICTED: prog ( 212) 1320 247.1 1.6e-65
XP_016861134 (OMIM: 603285,609118) PREDICTED: prog ( 149) 929 176.9 1.5e-44
>>XP_016861133 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_016 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>XP_005247143 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_005 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>XP_005247145 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_005 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>XP_006713548 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_006 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>NP_665858 (OMIM: 603285,609118) programmed cell death (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
NP_665 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>NP_665859 (OMIM: 603285,609118) programmed cell death (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
NP_665 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>NP_009148 (OMIM: 603285,609118) programmed cell death (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
NP_009 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>XP_011510671 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_011 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>XP_005247144 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_005 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
>>XP_011510670 (OMIM: 603285,609118) PREDICTED: programm (212 aa)
initn: 1320 init1: 1320 opt: 1320 Z-score: 1297.2 bits: 247.1 E(85289): 1.6e-65
Smith-Waterman score: 1320; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE1 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKT
130 140 150 160 170 180
190 200 210
pF1KE1 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
::::::::::::::::::::::::::::::::
XP_011 YFKDGKAINVFVSANRLIHQTNLILQTFKTVA
190 200 210
212 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:39:42 2016 done: Mon Nov 7 02:39:43 2016
Total Scan time: 5.600 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]