Result of FASTA (omim) for
pFN21AE1222
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1222, 245 aa
1>>>pF1KE1222 245 - 245 aa - 245 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8501+/-0.000368; mu= 1.4395+/- 0.023
mean_var=300.7566+/-61.248, 0's: 0 Z-trim(124.0): 372 B-trim: 2267 in 2/58
Lambda= 0.073955
statistics sampled from 44508 (44946) to 44508 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.819), E-opt: 0.2 (0.527), width: 16
Scan time: 7.790
The best scores are: opt bits E(85289)
XP_005270119 (OMIM: 178500,178630) PREDICTED: pulm ( 248) 1757 199.7 3.8e-51
NP_005402 (OMIM: 178500,178630) pulmonary surfacta ( 248) 1757 199.7 3.8e-51
NP_001158119 (OMIM: 178500,178630) pulmonary surfa ( 248) 1757 199.7 3.8e-51
NP_001158116 (OMIM: 178500,178630) pulmonary surfa ( 248) 1757 199.7 3.8e-51
XP_006718016 (OMIM: 178500,178630) PREDICTED: pulm ( 263) 1757 199.8 4e-51
NP_001087239 (OMIM: 178500,178630) pulmonary surfa ( 263) 1757 199.8 4e-51
XP_016872097 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 1706 194.3 1.7e-49
NP_001092138 (OMIM: 178500,178642) pulmonary surfa ( 248) 1706 194.3 1.7e-49
NP_001307742 (OMIM: 178500,178642) pulmonary surfa ( 248) 1706 194.3 1.7e-49
XP_011538427 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 1706 194.3 1.7e-49
XP_005270189 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 1706 194.3 1.7e-49
XP_011538426 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 1706 194.3 1.7e-49
NP_001307743 (OMIM: 178500,178642) pulmonary surfa ( 258) 1706 194.3 1.7e-49
XP_005270185 (OMIM: 178500,178642) PREDICTED: pulm ( 265) 1706 194.3 1.7e-49
NP_001158118 (OMIM: 178500,178630) pulmonary surfa ( 199) 1171 137.1 2.2e-32
NP_001158117 (OMIM: 178500,178630) pulmonary surfa ( 214) 1171 137.2 2.3e-32
XP_011538390 (OMIM: 178635) PREDICTED: pulmonary s ( 336) 520 67.9 2.5e-11
NP_003010 (OMIM: 178635) pulmonary surfactant-asso ( 375) 520 68.0 2.7e-11
XP_011538389 (OMIM: 178635) PREDICTED: pulmonary s ( 375) 520 68.0 2.7e-11
NP_000233 (OMIM: 154545,614372) mannose-binding pr ( 248) 492 64.8 1.6e-10
XP_011538118 (OMIM: 154545,614372) PREDICTED: mann ( 248) 492 64.8 1.6e-10
XP_006717924 (OMIM: 154545,614372) PREDICTED: mann ( 248) 492 64.8 1.6e-10
NP_001311024 (OMIM: 607620) collectin-10 isoform 2 ( 208) 311 45.4 9.5e-05
XP_005250813 (OMIM: 607620) PREDICTED: collectin-1 ( 208) 311 45.4 9.5e-05
XP_016855830 (OMIM: 120326) PREDICTED: collagen al (1028) 316 46.7 0.00019
XP_016855829 (OMIM: 120326) PREDICTED: collagen al (1077) 316 46.7 0.00019
XP_011532991 (OMIM: 610043) PREDICTED: collagen al ( 548) 310 45.8 0.00019
XP_011539030 (OMIM: 120326) PREDICTED: collagen al (1089) 316 46.7 0.00019
XP_011539029 (OMIM: 120326) PREDICTED: collagen al (1302) 316 46.8 0.00022
XP_011539026 (OMIM: 120326) PREDICTED: collagen al (1563) 316 46.9 0.00025
XP_005270538 (OMIM: 120326) PREDICTED: collagen al (1588) 316 46.9 0.00025
XP_016855828 (OMIM: 120326) PREDICTED: collagen al (1592) 316 46.9 0.00025
XP_016855827 (OMIM: 120326) PREDICTED: collagen al (1593) 316 46.9 0.00025
NP_001847 (OMIM: 120326) collagen alpha-1(XVI) cha (1604) 316 46.9 0.00025
XP_016884751 (OMIM: 301050,303630) PREDICTED: coll (1289) 314 46.6 0.00025
XP_016884750 (OMIM: 301050,303630) PREDICTED: coll (1330) 314 46.6 0.00026
NP_000486 (OMIM: 301050,303630) collagen alpha-5(I (1685) 314 46.7 0.0003
NP_542995 (OMIM: 120350,616720) collagen alpha-1(X ( 610) 305 45.3 0.0003
XP_016884749 (OMIM: 301050,303630) PREDICTED: coll (1690) 314 46.7 0.0003
NP_203699 (OMIM: 301050,303630) collagen alpha-5(I (1691) 314 46.7 0.0003
XP_016884748 (OMIM: 301050,303630) PREDICTED: coll (1693) 314 46.7 0.0003
XP_011529151 (OMIM: 301050,303630) PREDICTED: coll (1696) 314 46.7 0.0003
XP_016871180 (OMIM: 120350,616720) PREDICTED: coll ( 651) 305 45.3 0.00031
XP_016871176 (OMIM: 120350,616720) PREDICTED: coll ( 672) 305 45.3 0.00032
XP_016871184 (OMIM: 120350,616720) PREDICTED: coll ( 602) 304 45.2 0.00032
XP_016871183 (OMIM: 120350,616720) PREDICTED: coll ( 628) 304 45.2 0.00033
XP_016871182 (OMIM: 120350,616720) PREDICTED: coll ( 649) 304 45.2 0.00033
XP_016871181 (OMIM: 120350,616720) PREDICTED: coll ( 651) 304 45.2 0.00034
XP_016871179 (OMIM: 120350,616720) PREDICTED: coll ( 657) 304 45.2 0.00034
XP_016871177 (OMIM: 120350,616720) PREDICTED: coll ( 666) 304 45.2 0.00034
>>XP_005270119 (OMIM: 178500,178630) PREDICTED: pulmonar (248 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 1039.2 bits: 199.7 E(85289): 3.8e-51
Smith-Waterman score: 1757; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
XP_005 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
XP_005 SRLTICEF
>>NP_005402 (OMIM: 178500,178630) pulmonary surfactant-a (248 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 1039.2 bits: 199.7 E(85289): 3.8e-51
Smith-Waterman score: 1757; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_005 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
NP_005 SRLTICEF
>>NP_001158119 (OMIM: 178500,178630) pulmonary surfactan (248 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 1039.2 bits: 199.7 E(85289): 3.8e-51
Smith-Waterman score: 1757; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
NP_001 SRLTICEF
>>NP_001158116 (OMIM: 178500,178630) pulmonary surfactan (248 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 1039.2 bits: 199.7 E(85289): 3.8e-51
Smith-Waterman score: 1757; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
NP_001 SRLTICEF
>>XP_006718016 (OMIM: 178500,178630) PREDICTED: pulmonar (263 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 1038.9 bits: 199.8 E(85289): 4e-51
Smith-Waterman score: 1757; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:16-260)
10 20 30 40
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRD
:::::::::::::::::::::::::::::::::::::::::::::
XP_006 MRPCQVPGAATGPRAMWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 GRDGVKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE1 ELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE1 RNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCV
190 200 210 220 230 240
230 240
pF1KE1 EMYTDGQWNDRNCLYSRLTI
::::::::::::::::::::
XP_006 EMYTDGQWNDRNCLYSRLTICEF
250 260
>>NP_001087239 (OMIM: 178500,178630) pulmonary surfactan (263 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 1038.9 bits: 199.8 E(85289): 4e-51
Smith-Waterman score: 1757; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:16-260)
10 20 30 40
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRD
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRPCQVPGAATGPRAMWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 GRDGVKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE1 ELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE1 RNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCV
190 200 210 220 230 240
230 240
pF1KE1 EMYTDGQWNDRNCLYSRLTI
::::::::::::::::::::
NP_001 EMYTDGQWNDRNCLYSRLTICEF
250 260
>>XP_016872097 (OMIM: 178500,178642) PREDICTED: pulmonar (248 aa)
initn: 1706 init1: 1706 opt: 1706 Z-score: 1009.7 bits: 194.3 E(85289): 1.7e-49
Smith-Waterman score: 1706; 97.1% identity (98.8% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
::::::::.:::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_016 MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::: ::::::.:::::::.::: ::::: :::::::::::::::::::::::::::::
XP_016 GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
XP_016 SRLTICEF
>>NP_001092138 (OMIM: 178500,178642) pulmonary surfactan (248 aa)
initn: 1706 init1: 1706 opt: 1706 Z-score: 1009.7 bits: 194.3 E(85289): 1.7e-49
Smith-Waterman score: 1706; 97.1% identity (98.8% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
::::::::.:::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_001 MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::: ::::::.:::::::.::: ::::: :::::::::::::::::::::::::::::
NP_001 GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
NP_001 SRLTICEF
>>NP_001307742 (OMIM: 178500,178642) pulmonary surfactan (248 aa)
initn: 1706 init1: 1706 opt: 1706 Z-score: 1009.7 bits: 194.3 E(85289): 1.7e-49
Smith-Waterman score: 1706; 97.1% identity (98.8% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
::::::::.:::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_001 MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::: ::::::.:::::::.::: ::::: :::::::::::::::::::::::::::::
NP_001 GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
NP_001 SRLTICEF
>>XP_011538427 (OMIM: 178500,178642) PREDICTED: pulmonar (248 aa)
initn: 1706 init1: 1706 opt: 1706 Z-score: 1009.7 bits: 194.3 E(85289): 1.7e-49
Smith-Waterman score: 1706; 97.1% identity (98.8% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
::::::::.:::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_011 MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAHLDEELQATLHDFRHQILQ
::::: ::::::.:::::::.::: ::::: :::::::::::::::::::::::::::::
XP_011 GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
190 200 210 220 230 240
pF1KE1 SRLTI
:::::
XP_011 SRLTICEF
245 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:44:06 2016 done: Sun Nov 6 21:44:08 2016
Total Scan time: 7.790 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]