Result of FASTA (omim) for
pFN21AE1221
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1221, 243 aa
1>>>pF1KE1221 243 - 243 aa - 243 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0813+/-0.000377; mu= 0.4309+/- 0.024
mean_var=307.3765+/-64.367, 0's: 0 Z-trim(124.5): 427 B-trim: 2124 in 2/57
Lambda= 0.073154
statistics sampled from 45930 (46397) to 45930 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.829), E-opt: 0.2 (0.544), width: 16
Scan time: 7.990
The best scores are: opt bits E(85289)
NP_001265360 (OMIM: 605670,608752) complement C1q ( 243) 1733 195.1 9e-50
NP_056460 (OMIM: 605670,608752) complement C1q tum ( 243) 1733 195.1 9e-50
NP_001171271 (OMIM: 605441,612556) adiponectin pre ( 244) 537 68.9 9e-12
NP_004788 (OMIM: 605441,612556) adiponectin precur ( 244) 537 68.9 9e-12
NP_758957 (OMIM: 120575,613652) complement C1q sub ( 245) 524 67.6 2.3e-11
NP_001107573 (OMIM: 120575,613652) complement C1q ( 245) 524 67.6 2.3e-11
NP_001290067 (OMIM: 614285) complement C1q and tum ( 333) 495 64.6 2.4e-10
NP_001290066 (OMIM: 614285) complement C1q and tum ( 333) 495 64.6 2.4e-10
NP_848635 (OMIM: 614285) complement C1q and tumor ( 333) 495 64.6 2.4e-10
NP_001007538 (OMIM: 614148) complement C1q and tum ( 333) 484 63.5 5.3e-10
XP_011533372 (OMIM: 614148) PREDICTED: complement ( 333) 484 63.5 5.3e-10
XP_011540361 (OMIM: 120570,613652) PREDICTED: comp ( 253) 474 62.3 9.3e-10
NP_000482 (OMIM: 120570,613652) complement C1q sub ( 253) 474 62.3 9.3e-10
NP_057075 (OMIM: 120550,613652) complement C1q sub ( 245) 416 56.2 6.3e-08
NP_006679 (OMIM: 611586) C1q-related factor precur ( 258) 387 53.1 5.5e-07
NP_872334 (OMIM: 614330) complement C1q-like prote ( 287) 370 51.4 2e-06
NP_112207 (OMIM: 612045) complement C1q tumor necr ( 246) 356 49.8 5.1e-06
NP_852100 (OMIM: 612045) complement C1q tumor necr ( 319) 356 50.0 6.1e-06
NP_940996 (OMIM: 610365) complement C1q tumor necr ( 199) 301 43.9 0.00025
XP_016879615 (OMIM: 610365) PREDICTED: complement ( 199) 301 43.9 0.00025
XP_011538426 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027
XP_016872097 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027
NP_001092138 (OMIM: 178500,178642) pulmonary surfa ( 248) 302 44.1 0.00027
XP_011538427 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027
XP_005270189 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027
NP_001307742 (OMIM: 178500,178642) pulmonary surfa ( 248) 302 44.1 0.00027
NP_001307743 (OMIM: 178500,178642) pulmonary surfa ( 258) 302 44.2 0.00027
XP_005270185 (OMIM: 178500,178642) PREDICTED: pulm ( 265) 302 44.2 0.00028
NP_940995 (OMIM: 610365) complement C1q tumor necr ( 281) 301 44.1 0.00031
NP_699203 (OMIM: 610365) complement C1q tumor necr ( 281) 301 44.1 0.00031
NP_112230 (OMIM: 610365) complement C1q tumor necr ( 281) 301 44.1 0.00031
XP_006714998 (OMIM: 610043) PREDICTED: collagen al ( 554) 307 45.1 0.00032
XP_006721729 (OMIM: 610365) PREDICTED: complement ( 291) 301 44.1 0.00032
XP_016865507 (OMIM: 610043) PREDICTED: collagen al ( 305) 301 44.1 0.00033
XP_006721727 (OMIM: 610365) PREDICTED: complement ( 330) 301 44.2 0.00035
XP_006721726 (OMIM: 610365) PREDICTED: complement ( 379) 301 44.2 0.00038
XP_011532994 (OMIM: 610043) PREDICTED: collagen al ( 472) 301 44.3 0.00044
NP_775736 (OMIM: 610043) collagen alpha-1(XXIII) c ( 540) 301 44.4 0.00048
NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 310 45.8 0.00048
XP_006714999 (OMIM: 610043) PREDICTED: collagen al ( 545) 301 44.4 0.00048
XP_011532991 (OMIM: 610043) PREDICTED: collagen al ( 548) 301 44.4 0.00049
XP_006714996 (OMIM: 610043) PREDICTED: collagen al ( 566) 301 44.4 0.0005
NP_001290039 (OMIM: 120130,175780,180000,607595,61 ( 519) 300 44.3 0.0005
XP_005246337 (OMIM: 104200,120070,141200,203780) P (1051) 303 44.9 0.00065
XP_011515191 (OMIM: 610026) PREDICTED: collagen al (1058) 303 44.9 0.00065
XP_016858784 (OMIM: 104200,120070,141200,203780) P (1119) 303 45.0 0.00067
XP_006712308 (OMIM: 104200,120070,141200,203780) P (1189) 303 45.0 0.0007
XP_011508858 (OMIM: 104200,120070,141200,203780) P (1257) 303 45.0 0.00073
XP_016868641 (OMIM: 610026) PREDICTED: collagen al (1264) 303 45.0 0.00073
XP_011515189 (OMIM: 610026) PREDICTED: collagen al (1264) 303 45.0 0.00073
>>NP_001265360 (OMIM: 605670,608752) complement C1q tumo (243 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 1014.5 bits: 195.1 E(85289): 9e-50
Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP
190 200 210 220 230 240
pF1KE1 VFA
:::
NP_001 VFA
>>NP_056460 (OMIM: 605670,608752) complement C1q tumor n (243 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 1014.5 bits: 195.1 E(85289): 9e-50
Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243)
10 20 30 40 50 60
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP
190 200 210 220 230 240
pF1KE1 VFA
:::
NP_056 VFA
>>NP_001171271 (OMIM: 605441,612556) adiponectin precurs (244 aa)
initn: 405 init1: 224 opt: 537 Z-score: 332.3 bits: 68.9 E(85289): 9e-12
Smith-Waterman score: 559; 43.3% identity (61.9% similar) in 247 aa overlap (6-235:7-242)
10 20 30 40 50
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPS-LCPGHPG-----LPGTPGHHGSQGLPGRDGRD
:::::.: : .. :. : : : . : ::: : .: :::::::
NP_001 MLLLGAVLLLLALP-GHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRD
10 20 30 40 50
60 70 80 90 100
pF1KE1 GRDGAPGAPGEKGEGGRPGLPGPRGD------PG---PRGEAGPAGPTGPAGECSVPPRS
: .:::::: : ::: ::.:: :: ::: : : : :: . ::
NP_001 G------TPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 AFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASL
:::. :. : : . :. : ... :.:.:::. :::: :..::.:::: : ::: ..
NP_001 AFSVGL-ETYVTIP-NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 QFDLVKNGESIA-SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQV-GVGDYIGIYASIK
. .: :. ... .. :. . : ::.....:: ::::.:: : :. :.::.
NP_001 KVSLFKKDKAMLFTYDQYQENNVDQA--SGSVLLHLEVGDQVWLQVYGEGERNGLYADND
180 190 200 210 220
230 240
pF1KE1 TDSTFSGFLVYSDWHSSPVFA
.::::.:::.: :
NP_001 NDSTFTGFLLYHDTN
230 240
>>NP_004788 (OMIM: 605441,612556) adiponectin precursor (244 aa)
initn: 405 init1: 224 opt: 537 Z-score: 332.3 bits: 68.9 E(85289): 9e-12
Smith-Waterman score: 559; 43.3% identity (61.9% similar) in 247 aa overlap (6-235:7-242)
10 20 30 40 50
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPS-LCPGHPG-----LPGTPGHHGSQGLPGRDGRD
:::::.: : .. :. : : : . : ::: : .: :::::::
NP_004 MLLLGAVLLLLALP-GHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRD
10 20 30 40 50
60 70 80 90 100
pF1KE1 GRDGAPGAPGEKGEGGRPGLPGPRGD------PG---PRGEAGPAGPTGPAGECSVPPRS
: .:::::: : ::: ::.:: :: ::: : : : :: . ::
NP_004 G------TPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 AFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASL
:::. :. : : . :. : ... :.:.:::. :::: :..::.:::: : ::: ..
NP_004 AFSVGL-ETYVTIP-NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 QFDLVKNGESIA-SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQV-GVGDYIGIYASIK
. .: :. ... .. :. . : ::.....:: ::::.:: : :. :.::.
NP_004 KVSLFKKDKAMLFTYDQYQENNVDQA--SGSVLLHLEVGDQVWLQVYGEGERNGLYADND
180 190 200 210 220
230 240
pF1KE1 TDSTFSGFLVYSDWHSSPVFA
.::::.:::.: :
NP_004 NDSTFTGFLLYHDTN
230 240
>>NP_758957 (OMIM: 120575,613652) complement C1q subcomp (245 aa)
initn: 627 init1: 256 opt: 524 Z-score: 324.9 bits: 67.6 E(85289): 2.3e-11
Smith-Waterman score: 533; 40.7% identity (62.2% similar) in 246 aa overlap (1-235:13-245)
10 20 30 40
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPG
.. ::.:::: : :. :: : :::::.::. : .::::
NP_758 MDVGPSSLPHLGLKLLLLLLLLPLR-GQANTGCYGIP----GMPGLPGAPGKDGYDGLPG
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP------
:. : . :: : ::. :.::::: : :: : : : :: : . :
NP_758 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK
60 70 80 90 100 110
110 120 130 140 150
pF1KE1 ---RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATV
.:.:.. : ... :: .. . :. ::.: :: ::. ::::::.:::.:::. ::.
NP_758 QKFQSVFTVTR-QTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE1 YRASLQFDLVKNGESIASFFQFFGGWPKPASL-SGGAMVRLEPEDQVWVQVG-VGDYIGI
. :.: : ..: ....: : : .. :::...::. ..::. :. :..::
NP_758 HTANLCVLLYRSGVKVVTFC---GHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI
180 190 200 210 220 230
220 230 240
pF1KE1 YASIKTDSTFSGFLVYSDWHSSPVFA
.: ::.:::::.. :
NP_758 QGS---DSVFSGFLLFPD
240
>>NP_001107573 (OMIM: 120575,613652) complement C1q subc (245 aa)
initn: 627 init1: 256 opt: 524 Z-score: 324.9 bits: 67.6 E(85289): 2.3e-11
Smith-Waterman score: 533; 40.7% identity (62.2% similar) in 246 aa overlap (1-235:13-245)
10 20 30 40
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPG
.. ::.:::: : :. :: : :::::.::. : .::::
NP_001 MDVGPSSLPHLGLKLLLLLLLLPLR-GQANTGCYGIP----GMPGLPGAPGKDGYDGLPG
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP------
:. : . :: : ::. :.::::: : :: : : : :: : . :
NP_001 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK
60 70 80 90 100 110
110 120 130 140 150
pF1KE1 ---RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATV
.:.:.. : ... :: .. . :. ::.: :: ::. ::::::.:::.:::. ::.
NP_001 QKFQSVFTVTR-QTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE1 YRASLQFDLVKNGESIASFFQFFGGWPKPASL-SGGAMVRLEPEDQVWVQVG-VGDYIGI
. :.: : ..: ....: : : .. :::...::. ..::. :. :..::
NP_001 HTANLCVLLYRSGVKVVTFC---GHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI
180 190 200 210 220 230
220 230 240
pF1KE1 YASIKTDSTFSGFLVYSDWHSSPVFA
.: ::.:::::.. :
NP_001 QGS---DSVFSGFLLFPD
240
>>NP_001290067 (OMIM: 614285) complement C1q and tumor n (333 aa)
initn: 412 init1: 355 opt: 495 Z-score: 306.8 bits: 64.6 E(85289): 2.4e-10
Smith-Waterman score: 521; 39.7% identity (59.0% similar) in 239 aa overlap (15-234:95-331)
10 20 30 40
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ
::: : . :. :: : : .:..
NP_001 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK
70 80 90 100 110 120
50 60 70 80 90
pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA--------
: : : : .: : : : : :: :: : :::.:::::.:: : :.
NP_001 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK
130 140 150 160 170 180
100 110 120 130 140
pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ
:: : :.:::.. . : :: :. ::..: :: .:::...:::::.
NP_001 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCH
190 200 210 220 230 240
150 160 170 180 190 200
pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW
. :::::. : ::. ..: .::::: .: . . . :: :: ...:. :.::
NP_001 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQAS--GGIVLQLKLGDEVW
250 260 270 280 290 300
210 220 230 240
pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA
.:: :. . :..:. :.::.:::..:
NP_001 LQVTGGERFNGLFADEDDDTTFTGFLLFSSP
310 320 330
>>NP_001290066 (OMIM: 614285) complement C1q and tumor n (333 aa)
initn: 412 init1: 355 opt: 495 Z-score: 306.8 bits: 64.6 E(85289): 2.4e-10
Smith-Waterman score: 521; 39.7% identity (59.0% similar) in 239 aa overlap (15-234:95-331)
10 20 30 40
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ
::: : . :. :: : : .:..
NP_001 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK
70 80 90 100 110 120
50 60 70 80 90
pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA--------
: : : : .: : : : : :: :: : :::.:::::.:: : :.
NP_001 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK
130 140 150 160 170 180
100 110 120 130 140
pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ
:: : :.:::.. . : :: :. ::..: :: .:::...:::::.
NP_001 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCH
190 200 210 220 230 240
150 160 170 180 190 200
pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW
. :::::. : ::. ..: .::::: .: . . . :: :: ...:. :.::
NP_001 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQAS--GGIVLQLKLGDEVW
250 260 270 280 290 300
210 220 230 240
pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA
.:: :. . :..:. :.::.:::..:
NP_001 LQVTGGERFNGLFADEDDDTTFTGFLLFSSP
310 320 330
>>NP_848635 (OMIM: 614285) complement C1q and tumor necr (333 aa)
initn: 412 init1: 355 opt: 495 Z-score: 306.8 bits: 64.6 E(85289): 2.4e-10
Smith-Waterman score: 521; 39.7% identity (59.0% similar) in 239 aa overlap (15-234:95-331)
10 20 30 40
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ
::: : . :. :: : : .:..
NP_848 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK
70 80 90 100 110 120
50 60 70 80 90
pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA--------
: : : : .: : : : : :: :: : :::.:::::.:: : :.
NP_848 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK
130 140 150 160 170 180
100 110 120 130 140
pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ
:: : :.:::.. . : :: :. ::..: :: .:::...:::::.
NP_848 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCH
190 200 210 220 230 240
150 160 170 180 190 200
pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW
. :::::. : ::. ..: .::::: .: . . . :: :: ...:. :.::
NP_848 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQAS--GGIVLQLKLGDEVW
250 260 270 280 290 300
210 220 230 240
pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA
.:: :. . :..:. :.::.:::..:
NP_848 LQVTGGERFNGLFADEDDDTTFTGFLLFSSP
310 320 330
>>NP_001007538 (OMIM: 614148) complement C1q and tumor n (333 aa)
initn: 426 init1: 356 opt: 484 Z-score: 300.5 bits: 63.5 E(85289): 5.3e-10
Smith-Waterman score: 510; 38.9% identity (59.4% similar) in 239 aa overlap (15-234:95-331)
10 20 30 40
pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ
::: : . :. :: : : .:..
NP_001 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK
70 80 90 100 110 120
50 60 70 80 90
pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA--------
: : : : .: : : : : :: :: : :::.:::::.:: : :.
NP_001 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK
130 140 150 160 170 180
100 110 120 130 140
pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ
:: : :.:::.. . : ::.:. ::..: :: .:::...:::::.
NP_001 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCH
190 200 210 220 230 240
150 160 170 180 190 200
pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW
. :::::. : ::. ..: .::::: .: . . . :: :. ...:. :..:
NP_001 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTRDAYVSSEDQAS--GSIVLQLKLGDEMW
250 260 270 280 290 300
210 220 230 240
pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA
.:: :. . :..:. :.::.:::..:
NP_001 LQVTGGERFNGLFADEDDDTTFTGFLLFSSQ
310 320 330
243 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:58:50 2016 done: Sun Nov 6 14:58:51 2016
Total Scan time: 7.990 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]