Result of FASTA (omim) for
pFN21AE1199
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1199, 368 aa
1>>>pF1KE1199 368 - 368 aa - 368 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.2813+/-0.00043; mu= -23.4952+/- 0.027
mean_var=648.6643+/-137.344, 0's: 0 Z-trim(126.1): 91 B-trim: 898 in 1/59
Lambda= 0.050358
statistics sampled from 51042 (51189) to 51042 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.853), E-opt: 0.2 (0.6), width: 16
Scan time: 11.380
The best scores are: opt bits E(85289)
NP_001139257 (OMIM: 600661) myocyte-specific enhan ( 368) 2610 203.8 5.1e-52
NP_001124398 (OMIM: 600660,608320) myocyte-specifi ( 497) 658 62.1 3.1e-09
XP_005254972 (OMIM: 600660,608320) PREDICTED: myoc ( 497) 658 62.1 3.1e-09
NP_001165365 (OMIM: 600660,608320) myocyte-specifi ( 497) 658 62.1 3.1e-09
XP_011519885 (OMIM: 600660,608320) PREDICTED: myoc ( 505) 654 61.8 3.9e-09
NP_001306135 (OMIM: 600660,608320) myocyte-specifi ( 505) 654 61.8 3.9e-09
NP_005578 (OMIM: 600660,608320) myocyte-specific e ( 499) 652 61.7 4.2e-09
XP_016877683 (OMIM: 600660,608320) PREDICTED: myoc ( 499) 652 61.7 4.2e-09
XP_016877682 (OMIM: 600660,608320) PREDICTED: myoc ( 499) 652 61.7 4.2e-09
XP_006714688 (OMIM: 600662,613443) PREDICTED: myoc ( 483) 648 61.4 5e-09
NP_001180276 (OMIM: 600662,613443) myocyte-specifi ( 483) 648 61.4 5e-09
XP_011519883 (OMIM: 600660,608320) PREDICTED: myoc ( 507) 648 61.4 5.2e-09
XP_011519884 (OMIM: 600660,608320) PREDICTED: myoc ( 507) 648 61.4 5.2e-09
XP_016877679 (OMIM: 600660,608320) PREDICTED: myoc ( 507) 648 61.4 5.2e-09
XP_016877680 (OMIM: 600660,608320) PREDICTED: myoc ( 507) 648 61.4 5.2e-09
XP_016877681 (OMIM: 600660,608320) PREDICTED: myoc ( 503) 636 60.5 9.5e-09
XP_005254971 (OMIM: 600660,608320) PREDICTED: myoc ( 503) 636 60.5 9.5e-09
XP_011519874 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
XP_011519880 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
XP_011519881 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
XP_011519873 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
XP_011519878 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
XP_011519875 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
XP_011519879 (OMIM: 600660,608320) PREDICTED: myoc ( 511) 632 60.2 1.2e-08
NP_001180277 (OMIM: 600662,613443) myocyte-specifi ( 417) 625 59.7 1.4e-08
XP_016864971 (OMIM: 600662,613443) PREDICTED: myoc ( 433) 624 59.6 1.6e-08
XP_011541703 (OMIM: 600662,613443) PREDICTED: myoc ( 433) 624 59.6 1.6e-08
XP_016864966 (OMIM: 600662,613443) PREDICTED: myoc ( 465) 624 59.6 1.6e-08
XP_016864965 (OMIM: 600662,613443) PREDICTED: myoc ( 465) 624 59.6 1.6e-08
NP_001294931 (OMIM: 600662,613443) myocyte-specifi ( 465) 624 59.6 1.6e-08
XP_011519892 (OMIM: 600660,608320) PREDICTED: myoc ( 307) 614 58.7 2e-08
XP_016877693 (OMIM: 600660,608320) PREDICTED: myoc ( 257) 605 58.0 2.8e-08
XP_016877692 (OMIM: 600660,608320) PREDICTED: myoc ( 259) 605 58.0 2.8e-08
XP_011541702 (OMIM: 600662,613443) PREDICTED: myoc ( 441) 610 58.6 3.2e-08
XP_016864968 (OMIM: 600662,613443) PREDICTED: myoc ( 441) 610 58.6 3.2e-08
XP_016864970 (OMIM: 600662,613443) PREDICTED: myoc ( 441) 610 58.6 3.2e-08
XP_016864969 (OMIM: 600662,613443) PREDICTED: myoc ( 441) 610 58.6 3.2e-08
NP_002388 (OMIM: 600662,613443) myocyte-specific e ( 473) 610 58.6 3.4e-08
NP_001180279 (OMIM: 600662,613443) myocyte-specifi ( 473) 610 58.6 3.4e-08
XP_011541698 (OMIM: 600662,613443) PREDICTED: myoc ( 473) 610 58.6 3.4e-08
XP_006714682 (OMIM: 600662,613443) PREDICTED: myoc ( 473) 610 58.6 3.4e-08
XP_005248568 (OMIM: 600662,613443) PREDICTED: myoc ( 473) 610 58.6 3.4e-08
NP_001180278 (OMIM: 600662,613443) myocyte-specifi ( 393) 605 58.2 3.8e-08
XP_005254973 (OMIM: 600660,608320) PREDICTED: myoc ( 263) 598 57.5 4e-08
NP_001258558 (OMIM: 600663) myocyte-specific enhan ( 514) 597 57.7 6.9e-08
XP_016856804 (OMIM: 600663) PREDICTED: myocyte-spe ( 514) 597 57.7 6.9e-08
XP_016856803 (OMIM: 600663) PREDICTED: myocyte-spe ( 514) 597 57.7 6.9e-08
XP_006711396 (OMIM: 600663) PREDICTED: myocyte-spe ( 514) 597 57.7 6.9e-08
XP_006711393 (OMIM: 600663) PREDICTED: myocyte-spe ( 521) 597 57.7 7e-08
XP_011507871 (OMIM: 600663) PREDICTED: myocyte-spe ( 521) 597 57.7 7e-08
>>NP_001139257 (OMIM: 600661) myocyte-specific enhancer (368 aa)
initn: 2610 init1: 2610 opt: 2610 Z-score: 1054.9 bits: 203.8 E(85289): 5.1e-52
Smith-Waterman score: 2610; 100.0% identity (100.0% similar) in 368 aa overlap (1-368:1-368)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGIGLDGPELEPDEGPEEPGEKFRRLAGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGIGLDGPELEPDEGPEEPGEKFRRLAGEG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKAGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKAGPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GLVHPLFSPSHLTSKTPPPLYLPTEGRRSDLPGGLAGPRGGLNTSRSLYSGLQNPCSTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLVHPLFSPSHLTSKTPPPLYLPTEGRRSDLPGGLAGPRGGLNTSRSLYSGLQNPCSTAT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 PGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGDGPPAVSSQPSGGRSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGDGPPAVSSQPSGGRSLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 EEGPPTRGASPPTPPVSIKSERLSPAPGGPGDFPKTFPYPLLLARSLAEPLRPGPALRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGPPTRGASPPTPPVSIKSERLSPAPGGPGDFPKTFPYPLLLARSLAEPLRPGPALRRL
310 320 330 340 350 360
pF1KE1 PLADGWPR
::::::::
NP_001 PLADGWPR
>>NP_001124398 (OMIM: 600660,608320) myocyte-specific en (497 aa)
initn: 662 init1: 548 opt: 658 Z-score: 286.7 bits: 62.1 E(85289): 3.1e-09
Smith-Waterman score: 658; 41.0% identity (63.9% similar) in 332 aa overlap (1-315:1-314)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
NP_001 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA
:::.::::::::.::::::::.::.:::...:. : ..:. . : . : ..: .:
NP_001 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL-
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA
.: .: . : . :..: :. .. : .:..:. . :..: :: :.
NP_001 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTSR
... : . : . . : :. : .:: :.: :: : : :. .::
NP_001 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGD
. .: . .. . : : : : : : . :... : .. ::. :.:
NP_001 A-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKGM
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 GPPAVSSQPSGGRSLGEEGPPTRGASPPT-PPVSIKSERLSPAPGGPGDFPKTFPYPLLL
:: ... :.... . :. ... :. ::
NP_001 MPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQG
290 300 310 320 330 340
350 360
pF1KE1 ARSLAEPLRPGPALRRLPLADGWPR
NP_001 FNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRD
350 360 370 380 390 400
>>XP_005254972 (OMIM: 600660,608320) PREDICTED: myocyte- (497 aa)
initn: 662 init1: 548 opt: 658 Z-score: 286.7 bits: 62.1 E(85289): 3.1e-09
Smith-Waterman score: 658; 41.0% identity (63.9% similar) in 332 aa overlap (1-315:1-314)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
XP_005 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA
:::.::::::::.::::::::.::.:::...:. : ..:. . : . : ..: .:
XP_005 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL-
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA
.: .: . : . :..: :. .. : .:..:. . :..: :: :.
XP_005 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTSR
... : . : . . : :. : .:: :.: :: : : :. .::
XP_005 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGD
. .: . .. . : : : : : : . :... : .. ::. :.:
XP_005 A-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKGM
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 GPPAVSSQPSGGRSLGEEGPPTRGASPPT-PPVSIKSERLSPAPGGPGDFPKTFPYPLLL
:: ... :.... . :. ... :. ::
XP_005 MPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQG
290 300 310 320 330 340
350 360
pF1KE1 ARSLAEPLRPGPALRRLPLADGWPR
XP_005 FNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRD
350 360 370 380 390 400
>>NP_001165365 (OMIM: 600660,608320) myocyte-specific en (497 aa)
initn: 662 init1: 548 opt: 658 Z-score: 286.7 bits: 62.1 E(85289): 3.1e-09
Smith-Waterman score: 658; 41.0% identity (63.9% similar) in 332 aa overlap (1-315:1-314)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
NP_001 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA
:::.::::::::.::::::::.::.:::...:. : ..:. . : . : ..: .:
NP_001 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL-
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA
.: .: . : . :..: :. .. : .:..:. . :..: :: :.
NP_001 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTSR
... : . : . . : :. : .:: :.: :: : : :. .::
NP_001 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGD
. .: . .. . : : : : : : . :... : .. ::. :.:
NP_001 A-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKGM
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 GPPAVSSQPSGGRSLGEEGPPTRGASPPT-PPVSIKSERLSPAPGGPGDFPKTFPYPLLL
:: ... :.... . :. ... :. ::
NP_001 MPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQG
290 300 310 320 330 340
350 360
pF1KE1 ARSLAEPLRPGPALRRLPLADGWPR
NP_001 FNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRD
350 360 370 380 390 400
>>XP_011519885 (OMIM: 600660,608320) PREDICTED: myocyte- (505 aa)
initn: 662 init1: 548 opt: 654 Z-score: 285.1 bits: 61.8 E(85289): 3.9e-09
Smith-Waterman score: 654; 38.6% identity (59.6% similar) in 386 aa overlap (1-366:1-365)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
XP_011 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA
:::.::::::::.::::::::.::.:::...:. : ..:. . : . : ..: .:
XP_011 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL-
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA
.: .: . : . :..: :. .. : .:..:. . :..: :: :.
XP_011 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTSR
... : . : . . : :. : .:: :.: :: : : :. .::
XP_011 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGD
. .: . .. . : : : : : : . :... : .. ::. :.:
XP_011 A-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKGM
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 GPPAVSSQPSGGRSLGEEGPPTRGASPP--TPPVSIKSERLSPAPGGPGDFPKTF--PYP
:: .: . :. . . :. : :: ::. . : : . .: .. :
XP_011 MPP-LSEEEE--LELNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYS
290 300 310 320 330
350 360
pF1KE1 LLLARSLAEPLRPGPALRRLPLADGWPR
: : : .:.. : ...:
XP_011 LTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNIS
340 350 360 370 380 390
>>NP_001306135 (OMIM: 600660,608320) myocyte-specific en (505 aa)
initn: 662 init1: 548 opt: 654 Z-score: 285.1 bits: 61.8 E(85289): 3.9e-09
Smith-Waterman score: 654; 38.6% identity (59.6% similar) in 386 aa overlap (1-366:1-365)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
NP_001 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA
:::.::::::::.::::::::.::.:::...:. : ..:. . : . : ..: .:
NP_001 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL-
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA
.: .: . : . :..: :. .. : .:..:. . :..: :: :.
NP_001 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTSR
... : . : . . : :. : .:: :.: :: : : :. .::
NP_001 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGD
. .: . .. . : : : : : : . :... : .. ::. :.:
NP_001 A-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKGM
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 GPPAVSSQPSGGRSLGEEGPPTRGASPP--TPPVSIKSERLSPAPGGPGDFPKTF--PYP
:: .: . :. . . :. : :: ::. . : : . .: .. :
NP_001 MPP-LSEEEE--LELNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYS
290 300 310 320 330
350 360
pF1KE1 LLLARSLAEPLRPGPALRRLPLADGWPR
: : : .:.. : ...:
NP_001 LTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNIS
340 350 360 370 380 390
>>NP_005578 (OMIM: 600660,608320) myocyte-specific enhan (499 aa)
initn: 603 init1: 530 opt: 652 Z-score: 284.4 bits: 61.7 E(85289): 4.2e-09
Smith-Waterman score: 652; 41.1% identity (63.4% similar) in 333 aa overlap (1-315:1-316)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
NP_005 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETL-KRRGIGLDGPELEPDEG---PEEPGEKFRRL
:::.::::::::.::::::::.::.:.: :.. : :.:. :: . . ::....
NP_005 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPD--PDTSYVLTPHTEEKYKKI
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 AGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPK
.: : . : . ::..: :. .. : .:..:. . :..: :: :.
NP_005 -NEEFDNMM---RNHKIAPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASST
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 AGPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTS
... : . : . . : :. : .:: :.: :: : : :. .:
NP_005 LTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNS
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 RSLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRG
:. .: . .. . : : : : : : . :... : .. ::. :.:
NP_005 RA-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKG
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 DGPPAVSSQPSGGRSLGEEGPPTRGASPPT-PPVSIKSERLSPAPGGPGDFPKTFPYPLL
:: ... :.... . :. ... :. ::
NP_005 MMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQ
290 300 310 320 330 340
350 360
pF1KE1 LARSLAEPLRPGPALRRLPLADGWPR
NP_005 GFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPR
350 360 370 380 390 400
>>XP_016877683 (OMIM: 600660,608320) PREDICTED: myocyte- (499 aa)
initn: 603 init1: 530 opt: 652 Z-score: 284.4 bits: 61.7 E(85289): 4.2e-09
Smith-Waterman score: 652; 41.1% identity (63.4% similar) in 333 aa overlap (1-315:1-316)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
XP_016 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETL-KRRGIGLDGPELEPDEG---PEEPGEKFRRL
:::.::::::::.::::::::.::.:.: :.. : :.:. :: . . ::....
XP_016 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPD--PDTSYVLTPHTEEKYKKI
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 AGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPK
.: : . : . ::..: :. .. : .:..:. . :..: :: :.
XP_016 -NEEFDNMM---RNHKIAPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASST
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 AGPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTS
... : . : . . : :. : .:: :.: :: : : :. .:
XP_016 LTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNS
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 RSLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRG
:. .: . .. . : : : : : : . :... : .. ::. :.:
XP_016 RA-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKG
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 DGPPAVSSQPSGGRSLGEEGPPTRGASPPT-PPVSIKSERLSPAPGGPGDFPKTFPYPLL
:: ... :.... . :. ... :. ::
XP_016 MMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQ
290 300 310 320 330 340
350 360
pF1KE1 LARSLAEPLRPGPALRRLPLADGWPR
XP_016 GFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPR
350 360 370 380 390 400
>>XP_016877682 (OMIM: 600660,608320) PREDICTED: myocyte- (499 aa)
initn: 603 init1: 530 opt: 652 Z-score: 284.4 bits: 61.7 E(85289): 4.2e-09
Smith-Waterman score: 652; 41.1% identity (63.4% similar) in 333 aa overlap (1-315:1-316)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
XP_016 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETL-KRRGIGLDGPELEPDEG---PEEPGEKFRRL
:::.::::::::.::::::::.::.:.: :.. : :.:. :: . . ::....
XP_016 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPD--PDTSYVLTPHTEEKYKKI
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 AGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPK
.: : . : . ::..: :. .. : .:..:. . :..: :: :.
XP_016 -NEEFDNMM---RNHKIAPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASST
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 AGPPGLVHPLFSPSHLTSKTPPPLYLPTEGR------RSDL--PGGLAG--PRG-GLNTS
... : . : . . : :. : .:: :.: :: : : :. .:
XP_016 LTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNG-AGSSPVGNGFVNS
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 RSLYSGLQNPCSTATPGP--PLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRG
:. .: . .. . : : : : : : . :... : .. ::. :.:
XP_016 RA-SPNLIGATGANSLGKVMPTKSPP--PPGGGNLGMNSRKPDLRVVIPPS------SKG
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 DGPPAVSSQPSGGRSLGEEGPPTRGASPPT-PPVSIKSERLSPAPGGPGDFPKTFPYPLL
:: ... :.... . :. ... :. ::
XP_016 MMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQ
290 300 310 320 330 340
350 360
pF1KE1 LARSLAEPLRPGPALRRLPLADGWPR
XP_016 GFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPR
350 360 370 380 390 400
>>XP_006714688 (OMIM: 600662,613443) PREDICTED: myocyte- (483 aa)
initn: 647 init1: 547 opt: 648 Z-score: 283.0 bits: 61.4 E(85289): 5e-09
Smith-Waterman score: 648; 40.9% identity (64.0% similar) in 328 aa overlap (1-315:1-314)
10 20 30 40 50 60
pF1KE1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST
::::::::.::.:.::::::::::::::::::::::::::::::::::::.:.:::::::
XP_006 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEPGEKFRRLAGE
:::.::::::::.::::::::.::.:::...:. : :.:. :: ..: . . :
XP_006 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPD--PDADDSALNKKENK-GCE
70 80 90 100 110
120 130 140 150 160
pF1KE1 GGDP----AL-PRPRLYPAAPAMPSPDVVYG----ALPPPGCDPSGLGEALPAQSRPS-P
. :: :: :: . ... . :.:::. . . ..:..:. :
XP_006 SPDPDSSYALTPRTEEKYKKINEEFDNMIKSHKIPAVPPPNFE---MPVSIPVSSHNSLV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 FRPAAPKAGPPGLVHPLFSPSHLTSKTPPPLYL--PTEGRRSDLPGGLAGPRGGLNTSRS
. . . : :.:. :: :: .. : . :. : . : :: .: ... .
XP_006 YSNPVSSLGNPNLL-PLAHPSLQRNSMSPGVTHRPPSAGNTGGLMGGDLTSGAGTSAGNG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 LYSGLQNPCSTATPGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQPPTLAPWQPSRGDGPP
. ..: ..:: :.. . .:: ..:: : : .: : :. . :
XP_006 YGNPRNSPGLLVSPGN-LNK-NMQAKSPPPMNLGMNNRKPDLR---VLIP--PGSKNTMP
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 AVSSQPSGGRSLGEEGPPTRGASPPTPPVSIKSERLSPAPGGPGDFPKTFPYPLLLARSL
.:... ....: . :. ... :: :
XP_006 SVNQRINNSQSAQSLATPVVSVATPTLPGQGMGGYPSAISTTYGTEYSLSSADLSSLSGF
290 300 310 320 330 340
368 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:00:25 2016 done: Sun Nov 6 21:00:27 2016
Total Scan time: 11.380 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]