Result of FASTA (ccds) for
pFN21AE1179
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1179, 689 aa
1>>>pF1KE1179 689 - 689 aa - 689 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3679+/-0.00134; mu= 4.3417+/- 0.081
mean_var=594.2117+/-125.621, 0's: 0 Z-trim(115.1): 218 B-trim: 564 in 2/50
Lambda= 0.052614
statistics sampled from 15402 (15622) to 15402 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.48), width: 16
Scan time: 3.750
The best scores are: opt bits E(32554)
CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1 ( 689) 5139 405.4 1.5e-112
CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6 ( 678) 2740 223.2 9.5e-58
CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6 ( 921) 2723 222.2 2.7e-57
CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20 ( 684) 2418 198.8 2.2e-50
CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8 (1626) 1998 167.5 1.4e-40
CCDS2297.1 COL3A1 gene_id:1281|Hs108|chr2 (1466) 1929 162.2 4.9e-39
CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499) 1907 160.5 1.6e-38
CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 1876 158.3 9e-38
CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 1876 158.3 9e-38
CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690) 1839 155.5 6e-37
CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767) 1839 155.5 6.2e-37
CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1 (1806) 1839 155.5 6.3e-37
CCDS11561.1 COL1A1 gene_id:1277|Hs108|chr17 (1464) 1826 154.4 1.1e-36
CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13 (1669) 1792 151.9 7.1e-36
CCDS6802.1 COL27A1 gene_id:85301|Hs108|chr9 (1860) 1771 150.4 2.3e-35
CCDS34682.1 COL1A2 gene_id:1278|Hs108|chr7 (1366) 1763 149.5 2.9e-35
CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2 (1670) 1747 148.5 7.6e-35
CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3 (2944) 1750 149.1 8.8e-35
CCDS43452.1 COL11A2 gene_id:1302|Hs108|chr6 (1650) 1707 145.4 6.2e-34
CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2 (1690) 1704 145.2 7.4e-34
CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12 (1418) 1666 142.2 4.9e-33
CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12 (1487) 1666 142.2 5.1e-33
CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX (1690) 1665 142.2 5.7e-33
CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX (1691) 1665 142.2 5.7e-33
CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX (1633) 1654 141.4 1e-32
CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX (1666) 1654 141.4 1e-32
CCDS41353.1 COL24A1 gene_id:255631|Hs108|chr1 (1714) 1651 141.2 1.2e-32
CCDS12222.1 COL5A3 gene_id:50509|Hs108|chr19 (1745) 1626 139.3 4.5e-32
CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX (1707) 1616 138.5 7.6e-32
CCDS41297.1 COL16A1 gene_id:1307|Hs108|chr1 (1604) 1597 137.1 2e-31
CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13 (1712) 1557 134.1 1.7e-30
CCDS42971.1 COL18A1 gene_id:80781|Hs108|chr21 (1339) 1550 133.4 2.1e-30
CCDS42972.1 COL18A1 gene_id:80781|Hs108|chr21 (1519) 1550 133.4 2.3e-30
CCDS77643.1 COL18A1 gene_id:80781|Hs108|chr21 (1754) 1550 133.5 2.5e-30
CCDS55025.1 COL21A1 gene_id:81578|Hs108|chr6 ( 957) 1482 128.0 6.4e-29
CCDS83099.1 COL21A1 gene_id:81578|Hs108|chr6 ( 954) 1477 127.6 8.3e-29
CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 ( 638) 1434 124.1 6.4e-28
CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 ( 703) 1434 124.1 6.7e-28
CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 ( 680) 1431 123.9 7.7e-28
CCDS58922.1 COL25A1 gene_id:84570|Hs108|chr4 ( 645) 1359 118.4 3.3e-26
CCDS76649.1 COL4A1 gene_id:1282|Hs108|chr13 ( 519) 1338 116.7 8.9e-26
CCDS44419.1 COL13A1 gene_id:1305|Hs108|chr10 ( 717) 1316 115.2 3.4e-25
CCDS44424.2 COL13A1 gene_id:1305|Hs108|chr10 ( 695) 1313 114.9 3.9e-25
CCDS44427.2 COL13A1 gene_id:1305|Hs108|chr10 ( 645) 1269 111.6 3.8e-24
CCDS44425.2 COL13A1 gene_id:1305|Hs108|chr10 ( 686) 1257 110.7 7.4e-24
CCDS43258.1 COL25A1 gene_id:84570|Hs108|chr4 ( 654) 1232 108.8 2.7e-23
CCDS43259.1 COL25A1 gene_id:84570|Hs108|chr4 ( 642) 1171 104.1 6.6e-22
CCDS44423.2 COL13A1 gene_id:1305|Hs108|chr10 ( 668) 1145 102.2 2.6e-21
CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 ( 744) 1126 100.8 7.6e-21
CCDS7554.1 COL17A1 gene_id:1308|Hs108|chr10 (1497) 1130 101.6 9e-21
>>CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1 (689 aa)
initn: 5139 init1: 5139 opt: 5139 Z-score: 2134.3 bits: 405.4 E(32554): 1.5e-112
Smith-Waterman score: 5139; 99.9% identity (100.0% similar) in 689 aa overlap (1-689:1-689)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS45 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
610 620 630 640 650 660
670 680
pF1KE1 PGFCEPAACLGASAYASARLTEPGSIKGP
:::::::::::::::::::::::::::::
CCDS45 PGFCEPAACLGASAYASARLTEPGSIKGP
670 680
>>CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6 (678 aa)
initn: 4352 init1: 2004 opt: 2740 Z-score: 1150.3 bits: 223.2 E(32554): 9.5e-58
Smith-Waterman score: 2740; 55.4% identity (69.1% similar) in 682 aa overlap (3-683:2-678)
10 20 30 40 50 60
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG
: :: :. : :: . . : ::::::.::::::::::::: :::::: :: : :
CCDS47 MAWTARDRGALGLLLLGLCLCAAQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPG
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP
:::: ::::: : : : :: ::::: : :: .: : ::.::.:: :.:: :. ::
CCDS47 PPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP
::::: .:::::.: :: :::: :: ::::::: : : .: : :::. :::
CCDS47 PGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDG-----DPLCPNACPP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA
: .: ::: :..:: : .: .:.::.::. : .:: : :: : :::: ::.:: :..
CCDS47 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT
: ::: : .: : : : : ::..: :::::.:: :::.:. : :: :. :::: :
CCDS47 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLP
: ::..:.:: :: :: :: :. : ::. : ::. :::: ::.:: :..: : : :
CCDS47 GLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKP
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE1 GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ
: : :: :. :: ::.::.: .: :..:: ::::.:: :. : : : ::.:::
CCDS47 GQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE1 GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS
::::.:::.: :. ::.:. : : : ::.:: :. : :::::. : :::: ::
CCDS47 GLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPE
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE1 GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV
:. : :::.: :::::::. :..:. : :: :: :: ::::: .: ....::..::.
CCDS47 GSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEM
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE1 AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR
:.: :: ::.:. : :::::::: ::..: :. : ::.::: : : .: ::::
CCDS47 AASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDL
540 550 560 570 580 590
610 620 630 640 650 660
pF1KE1 GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL
::::. : ::: :.:: :.:: :: . . ::.::.:: ::. : : :: ::: ::
CCDS47 GEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGL
600 610 620 630 640 650
670 680
pF1KE1 PGFCEPAAC-LGASAYASARLTEPGSIKGP
:::::::.: . :. : . .:
CCDS47 PGFCEPASCTMQAGQRAFNKGPDP
660 670
>>CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6 (921 aa)
initn: 4352 init1: 2004 opt: 2723 Z-score: 1142.0 bits: 222.2 E(32554): 2.7e-57
Smith-Waterman score: 2723; 56.1% identity (69.8% similar) in 659 aa overlap (26-683:268-921)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGP
::::::.::::::::::::: :::::: ::
CCDS49 MLIHCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGP
240 250 260 270 280 290
60 70 80 90 100 110
pF1KE1 PGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP
: ::::: ::::: : : : :: ::::: : :: .: : ::.::.:: :.::
CCDS49 KGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGR
300 310 320 330 340 350
120 130 140 150 160 170
pF1KE1 GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCP
:. ::::::: .:::::.: :: :::: :: ::::::: : : .: : :::
CCDS49 GIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDG-----DPLCP
360 370 380 390 400 410
180 190 200 210 220 230
pF1KE1 TNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRG
. :::: .: ::: :..:: : .: .:.::.::. : .:: : :: : :::: ::.::
CCDS49 NACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRG
420 430 440 450 460 470
240 250 260 270 280 290
pF1KE1 YPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITG
:..: ::: : .: : : : : ::..: :::::.:: :::.:. : :: :. :
CCDS49 ITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG
480 490 500 510 520 530
300 310 320 330 340 350
pF1KE1 PKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPG
::: :: ::..:.:: :: :: :: :. : ::. : ::. :::: ::.:: :..: :
CCDS49 PKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTG
540 550 560 570 580 590
360 370 380 390 400 410
pF1KE1 PQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPG
: :: : :: :. :: ::.::.: .: :..:: ::::.:: :. : : : ::
CCDS49 APGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPG
600 610 620 630 640 650
420 430 440 450 460 470
pF1KE1 IPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPG
.::: ::::.:::.: :. ::.:. : : : ::.:: :. : :::::. : ::::
CCDS49 LPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPG
660 670 680 690 700 710
480 490 500 510 520 530
pF1KE1 YPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQE
:: :. : :::.: :::::::. :..:. : :: :: :: ::::: .: ....::
CCDS49 LRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE
720 730 740 750 760 770
540 550 560 570 580 590
pF1KE1 QLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTG
..::.:.: :: ::.:. : :::::::: ::..: :. : ::.::: : : .: :
CCDS49 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG
780 790 800 810 820 830
600 610 620 630 640 650
pF1KE1 PKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLP
::: ::::. : ::: :.:: :.:: :: . . ::.::.:: ::. : : :: :
CCDS49 PKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPP
840 850 860 870 880 890
660 670 680
pF1KE1 GPVGLPGFCEPAAC-LGASAYASARLTEPGSIKGP
:: :::::::::.: . :. : . .:
CCDS49 GPPGLPGFCEPASCTMQAGQRAFNKGPDP
900 910 920
>>CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20 (684 aa)
initn: 2360 init1: 1313 opt: 2418 Z-score: 1018.1 bits: 198.8 E(32554): 2.2e-50
Smith-Waterman score: 2418; 50.8% identity (65.8% similar) in 681 aa overlap (1-672:1-670)
10 20 30 40 50
pF1KE1 MAAATA-SPRSLLVLL-QVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGK
::. : .: ::.:: .... : :: : :: ::::::::: ::.:::::. ::::
CCDS13 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPG---PPGPPGPPGKPGQDGIDGEAGPPGL
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 AGPPGPKGEPGKAGPDGP---DGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP
::::::: ::: : : : ::.::::: : ::: : :: .:. : :::::: :
CCDS13 PGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCP
:. :::: : : :: ::.::: : : : ::::::: ::.::.. ::..:. ::
CCDS13 GLPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDLQCP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 TNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---PGPQG
. :::: ::::. : :: .: .: . :. :: : ::: : : :.:: ::.:
CCDS13 SICPPGPPGPPGMPGFKGPTGYKG---EQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 IRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQG
.:: :: :: :. :: :..: : :: : :..: ::: : : ::: : :: .: :
CCDS13 LRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 ITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQG
..::.: : :: .:..:.:: :.:: ::. : :: : .:. :.::. :.:: :..:
CCDS13 VAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERG
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE1 EPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQG
. : : : :: :: :. : :: : : :. : : .:: : :: .: :: :: .:
CCDS13 RAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMG
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE1 PPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRG
::.:::::: : ::.: : .::.: : : ::::.::: : :: ::::..: ::
CCDS13 DPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRG
420 430 440 450 460 470
480 490 500 510 520 530
pF1KE1 EPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKM
: : : .: :. :::: :::::: :: : :::: :. :: :..:..:.: .. :
CCDS13 ELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGM
480 490 500 510 520 530
540 550 560 570 580 590
pF1KE1 LQEQLAEVAVSAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQI
..::.:..:. .. : :..: :: ::::::: ::. : ::: :: :: : .:..
CCDS13 ISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIG---HPGARGPPGYRGPTGEL
540 550 560 570 580
600 610 620 630 640 650
pF1KE1 GNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGR
:. ::.:..:..:: : .: : : : : : : :: . .:.:: : :: ::. :
CCDS13 GDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGL
590 600 610 620 630 640
660 670 680
pF1KE1 PGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP
:: : : ::.:. .:: ::
CCDS13 PGAIGAQGTPGICDTSACQGAVLGGVGEKSGSRSS
650 660 670 680
>>CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8 (1626 aa)
initn: 5122 init1: 1092 opt: 1998 Z-score: 842.1 bits: 167.5 E(32554): 1.4e-40
Smith-Waterman score: 2066; 45.4% identity (58.5% similar) in 716 aa overlap (27-689:925-1626)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPP
: :: :::: : ::. :. : ::. :
CCDS63 GPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEK
900 910 920 930 940 950
60 70 80 90
pF1KE1 GKAG------PPGPKGEPGKAGPDGPDGK--PGIDGLTGAKGEPGPMG------------
: :: : ::.:.:: : :: :: : :: :. : :::.:
CCDS63 GAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSE
960 970 980 990 1000 1010
100 110 120 130 140
pF1KE1 --------IPGVKGQPGLPGPPGL---PGPGFAGPPGPPGPVGLPGEIGIRGPKGDPGPD
. : .: ::.:: :: :: : :::::: :: : : : :: : :::.
CCDS63 NCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQ
1020 1030 1040 1050 1060 1070
150 160 170 180 190
pF1KE1 GPSGPPGPPGKPGRPGTIQGLEGSADFLCP-----------TNCPPGMKGPPGLQGVKGH
::.: : ::.::. : : : ...: : ..:::: :::: :. :
CCDS63 GPAGRDGAPGNPGERGP-PGKPGLSSLLSPGDINLLAKDVCNDCPPG---PPGLPGLPGF
1080 1090 1100 1110 1120 1130
200 210 220 230 240 250
pF1KE1 AGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGM
: .:. : ::..: : ::..: : : :: :::: .: : : :. : .:. :.
CCDS63 KGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGV
1140 1150 1160 1170 1180 1190
260 270 280 290 300 310
pF1KE1 VGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGT
: .: : :: : : : :: : .:::: .:: : ::.: : :: .::.: :
CCDS63 PGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGK
1200 1210 1220 1230 1240 1250
320 330 340 350 360 370
pF1KE1 PGMKGSAGQAGQPGSPGHQGVAGVPG---QPGTKGGPGDQGEPGPQGLPGFSGPPGKEGE
:: : :.::.:: :: .:. : :: . : .:.:: .:: : .:::: : :::.:.
CCDS63 PGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGD
1260 1270 1280 1290 1300 1310
380 390 400 410 420
pF1KE1 PGPRGEIGPQGIMGQKGDQGERGPVGQPGPQG---RQGPKGEQGPPGIPG---PQGLPGV
:: : :::: : : .: : :.:::.: ..: :::.: ::.:: :.: ::
CCDS63 TGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGE
1320 1330 1340 1350 1360 1370
430 440 450 460 470 480
pF1KE1 KGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGA
:.:: ::: : :: :.:: : :. : ::..: :: ::: : .:: :: .: .:
CCDS63 PGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPG---DPGIPGHKGHTGL
1380 1390 1400 1410 1420
490 500 510 520 530 540
pF1KE1 PGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVAL-KMLQEQLAEVAVSA
: :: :: :: : : : :: :: .: : ..... : :.:. .:: . ..
CCDS63 MGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQM
1430 1440 1450 1460 1470 1480
550 560 570 580 590 600
pF1KE1 KREAL-GAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEK
. .. : ::::::: : ::. :: :.:: : :. : : :: :::.:: :
CCDS63 PPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIG---PKGERGAK
1490 1500 1510 1520 1530 1540
610 620 630 640 650 660
pF1KE1 GDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGF
:::: : : : ::::::: ::.:: : .: : : : : ::.:::::: : ::
CCDS63 GDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQ
1550 1560 1570 1580 1590 1600
670 680
pF1KE1 CEPAACLGASAYASARLTEPGSIKGP
:.:. : :: .. ..::..:::
CCDS63 CDPSQC----AYFASLAARPGNVKGP
1610 1620
>--
initn: 701 init1: 701 opt: 1182 Z-score: 507.4 bits: 105.6 E(32554): 6.1e-22
Smith-Waterman score: 1397; 45.4% identity (58.1% similar) in 511 aa overlap (28-509:451-923)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGID-------
:: :: :: : .:::. :
CCDS63 IVIYCDSRHAELETCCDIPSGPCQVTVVTEPP----PPPPPQRPPTPGSEQIGFLKTINC
430 440 450 460 470
60 70 80 90 100
pF1KE1 ----GDNGPPGKAGP---PGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQ
:..: : ::: :::::. : :: : : : : .: : : .: : ::.
CCDS63 SCPAGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGI-G-PFGQGEKGEKGS
480 490 500 510 520 530
110 120 130 140 150 160
pF1KE1 PGLPGPPGLPGP-GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGT
::::::: : :. : :: : :::::.:.:::.: : : :::::. : ::
CCDS63 LGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQG------PPGLPGPPGRVGAPG-
540 550 560 570 580
170 180 190 200 210 220
pF1KE1 IQGLEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQ
.:: .: : .: : .:. : :: : : :.::.:::.: .: .::.
CCDS63 LQGERGEK----------GTRGEKGERGLDGFPGKPG---DTGQQGRPGPSGVAGPQGEK
590 600 610 620 630
230 240 250 260 270
pF1KE1 GIPGPPGPQGIRG----YPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAG-
: :: :: :. : :. : .: ::.:..: : :: :: : :: :::: :
CCDS63 GDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGL
640 650 660 670 680 690
280 290 300 310 320 330
pF1KE1 --EKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGV
.::: : ::: : :. :: : :::. : : :.::. : : :.:: :: :
CCDS63 RGKKGDMGPPGIPGLLGLQGPPG---PPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGP
700 710 720 730 740 750
340 350 360 370 380 390
pF1KE1 AGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGP
: : : : :: .:::: .: :. ::: :: ::::: ::. :. :..:: :
CCDS63 PGKDGPNGPPGPPGTKGEPGERGEDGL---PGK---PGLRGEIGEQGLAGRPGEKGEAGL
760 770 780 790 800
400 410 420 430 440
pF1KE1 VGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGL------
: :: : .: ::.:: : ::::.:::.: :..:: : : ::...:
CCDS63 PGAPGFPGVRGEKGDQGEKG---ELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPR
810 820 830 840 850 860
450 460 470 480 490 500
pF1KE1 -PGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPG
:::.: :::.:.:: :. :..:.:: ::.: .: ::..: : : : ::: :.::
CCDS63 MPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPG
870 880 890 900 910 920
510 520 530 540 550 560
pF1KE1 QPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPG
.
CCDS63 HVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPG
930 940 950 960 970 980
>>CCDS2297.1 COL3A1 gene_id:1281|Hs108|chr2 (1466 aa)
initn: 1245 init1: 1245 opt: 1929 Z-score: 814.3 bits: 162.2 E(32554): 4.9e-39
Smith-Waterman score: 1968; 44.7% identity (56.6% similar) in 732 aa overlap (27-689:372-1090)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPP
:: :. : :::::::. :: : :. ::
CCDS22 GFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPA
350 360 370 380 390 400
60 70 80 90 100
pF1KE1 GKAGPPGPKGEPGKAGPDGPDGKPGI------DGLTGAKGEPGPMG---------IPGVK
: : :: : : :: : .: ::. : .:::::::: : .::.:
CCDS22 GIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAK
410 420 430 440 450 460
110 120 130 140 150
pF1KE1 GQPGLPGPPGLPG----PGFAGP---PG---PPGPVGLPGEIGIRGPKGDPGPDGPSGPP
:. : : :: :: :: :: :: : :: :.::: : : .: ::: :: :
CCDS22 GEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAA
470 480 490 500 510 520
160 170 180 190 200
pF1KE1 GPPGKPGRPGT--IQGLEGSADFLCPTNCPPGMKGPPGLQGVKGHAGK---RGILGDPGH
: ::. : :: ..:. :: : . : :::: :: .:. : : :.::
CCDS22 GEPGRDGVPGGPGMRGMPGSPG--GPGS--DGKPGPPGSQGESGRPGPPGPSGPRGQPGV
530 540 550 560 570
210 220 230 240 250
pF1KE1 QGKPGPKGDVGA---SGEQGIPGPPGPQGI---------RGYPGMAGP---KGETGPHGY
.: :::::. :: .::.: :: ::::: .: :: .:: ::.::: :
CCDS22 MGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGP
580 590 600 610 620 630
260 270 280 290 300
pF1KE1 KGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITG---PKGATGPPGINGK
.:. : :. :::::.: : :: :. : :.:: .: : : : : .: ::. :
CCDS22 QGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGG
640 650 660 670 680 690
310 320 330 340 350 360
pF1KE1 DGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGK
: :: : ::.:: : ::. : :. :.::. : :.:: .:. : : :: .: :::
CCDS22 AGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK
700 710 720 730 740 750
370 380 390 400 410 420
pF1KE1 EGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGD
.: :: : ::: : :: ::.:: : : :: : .: ::.: : ::: :.::. :.
CCDS22 DGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQ
760 770 780 790 800 810
430 440 450 460 470 480
pF1KE1 KGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGV
.: :: : :: :. : .: :: : : :: :: : :::.:: : :: : :: ::.
CCDS22 NGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGA
820 830 840 850 860 870
490 500 510 520 530 540
pF1KE1 QGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREA
.: ::::: . : :: :: .: :.:. ... . . ...
CCDS22 RGLPGPPG------SNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGE
880 890 900 910 920 930
550 560 570 580 590 600
pF1KE1 LGAVGMMGPPGPPGPPGYPGKQG------PHGHPGPRGVPGIVGAVGQIGNTGPKGKRGE
:. : .:::: ::: : : : : : ::::: :: :. :. :. : .: ::
CCDS22 KGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGE
940 950 960 970 980 990
610 620 630 640 650
pF1KE1 KGDPGEVG-------RGHPGMPGPPGIPGLPGRPGQ-AINGKDGDRGSPGAPGEAGRPGL
.: :: : :.:: : :: ::::: :. . .: :. ::::::: :.::
CCDS22 RGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGP
1000 1010 1020 1030 1040 1050
660 670 680
pF1KE1 PGPVGLP-------GFCEPAACLGASAYASARLTEPGSIKGP
::::: : : ::. :: . :..: :: .::
CCDS22 PGPVG-PAGKSGDRGESGPAGPAGAPGPAGSR-GAPGP-QGPRGDKGETGERGAAGIKGH
1060 1070 1080 1090 1100
CCDS22 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN
1110 1120 1130 1140 1150 1160
>--
initn: 1279 init1: 695 opt: 839 Z-score: 367.1 bits: 79.5 E(32554): 4e-14
Smith-Waterman score: 861; 44.1% identity (55.2% similar) in 315 aa overlap (28-339:98-371)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPG
::. .:: :: : :: :: : .:: : ::
CCDS22 DDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPG
70 80 90 100 110 120
60 70 80 90 100 110
pF1KE1 KAGPPGPKGEPG--KAGPDGPDG-KPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPG
. : :: : :: .. : ::.. .: :. .: ... :. : :: :::: ::
CCDS22 QPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSG----VAVGGLAGYPGPAGPPGPPG
130 140 150 160 170 180
120 130 140 150 160 170
pF1KE1 PGFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLC
::: : : :: : .:: :.:: :::::::::: :
CCDS22 -----PPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIG----------------
190 200 210 220
180 190 200 210 220 230
pF1KE1 PTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIR
:. :: : .: .:. :. ::..: ::: : .: :::: :: .: :
CCDS22 PS-------GPAGKDGESGRPGR------PGERGLPGPPG---IKGPAGIPGFPGMKGHR
230 240 250 260
240 250 260 270 280 290
pF1KE1 GYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGIT
:. : : ::::: : :: : : .: :: :::: ::. :. : :. : :: .:
CCDS22 GFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGAR
270 280 290 300 310 320
300 310 320 330 340 350
pF1KE1 GPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEP
: : :::: : : ::.:: :: .: ::.::: : : : :
CCDS22 GSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPP
330 340 350 360 370 380
360 370 380 390 400 410
pF1KE1 GPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPP
CCDS22 GINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPR
390 400 410 420 430 440
>>CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499 aa)
initn: 4605 init1: 1193 opt: 1907 Z-score: 805.2 bits: 160.5 E(32554): 1.6e-38
Smith-Waterman score: 1927; 44.7% identity (57.2% similar) in 698 aa overlap (27-689:282-940)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPP
: :: :: :: :: ::. : : : .::
CCDS33 GSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPK
260 270 280 290 300 310
60 70 80 90 100 110
pF1KE1 GKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP-
:..: :: ::: : .:: : : : :. : .:. ::.: :: .: :.:: :: ::
CCDS33 GEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPL
320 330 340 350 360 370
120 130 140 150 160 170
pF1KE1 ---GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADF
: .: :: :: : : : :::.: : : .::::: :.:: ::.: : .:.
CCDS33 GIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAI-GTDGTPGA
380 390 400 410 420 430
180 190 200 210 220
pF1KE1 LCPTNCP-----PGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGE---QGI
::. : :: :::: : .: .: .:: :.:: : :: ::..: .:: .::
CCDS33 KGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGI
440 450 460 470 480 490
230 240 250 260 270
pF1KE1 PGPPGP------QGIRGYPGMAGPKG---ETGPHGYKGMVGAIGATGPPGEEGPRGPPGR
:: :: .: :: :: .:: : : : : .:. :. : :: : .: ::: :
CCDS33 QGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGS
500 510 520 530 540 550
280 290 300 310 320 330
pF1KE1 AGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPG---H
.: ::..:.:: : :. : .: :: ::..: .: : : : :. : ::: : .
CCDS33 SGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQ
560 570 580 590 600 610
340 350 360 370 380 390
pF1KE1 QGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGE
: :.:: :..: :: :: : :.:: : :::.:: :: : .:: :. :..:.::
CCDS33 PGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGP
620 630 640 650 660 670
400 410 420 430 440 450
pF1KE1 RGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGE
::.: : : :: :: : :: : : ::. : : :. : :. :.::..:::::
CCDS33 PGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGE
680 690 700 710 720 730
460 470 480 490 500 510
pF1KE1 KGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGR
:: : : ::::. : : :: :: : : :: .: : :::. :.:: :. :
CCDS33 KGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPK---GDRGGIGEKGA
740 750 760 770 780
520 530 540 550 560 570
pF1KE1 QGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGP
.:. : :. : : : .::::: :: : :. ::
CCDS33 EGTAGNDG---------------------------ARGLPGPLGPPGPAGPTGEKGEPGP
790 800 810 820
580 590 600 610 620
pF1KE1 HG---------HPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVG-RGHPGMPGPPGI
.: .:: :: : .:::: : :: :. : ::.::: : .: : ::: :.
CCDS33 RGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGL
830 840 850 860 870 880
630 640 650 660 670 680
pF1KE1 PGLPGRPG-QAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARLT
: :: : ... : : ::. : :: .: :: : :: :: :: :: . :. :
CCDS33 AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPG---PA---GAPGPAGP-LG
890 900 910 920 930
pF1KE1 EPGSIKGP
:::. .::
CCDS33 EPGK-EGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQR
940 950 960 970 980 990
>--
initn: 867 init1: 867 opt: 930 Z-score: 404.4 bits: 86.4 E(32554): 3.3e-16
Smith-Waterman score: 950; 45.1% identity (56.3% similar) in 350 aa overlap (38-373:941-1267)
10 20 30 40 50 60
pF1KE1 PRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGE
:: : ::: : :: :: : : :: ::.
CCDS33 PGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGD
920 930 940 950 960 970
70 80 90 100 110 120
pF1KE1 PGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPG---P-GFAGPPGP
::. : :::: :: : :: .: : : : .:.:::::: : :: : : .: ::
CCDS33 PGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGP
980 990 1000 1010 1020 1030
130 140 150 160 170 180
pF1KE1 PGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMK
::::: :: :: :.:::.::.: : ::. : : .: .:. ::
CCDS33 PGPVGPPGS---NGPVGEPGPEGPAGNDGTPGRDGAVGE-RGDRGD----------PGPA
1040 1050 1060 1070
190 200 210 220 230 240
pF1KE1 GPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPK
: :: ::. : : : :: :..: :: .: .: ::: : :: :: ::.
CCDS33 GLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIG---------PPGRAGKRGLPGPQGPR
1080 1090 1100 1110 1120
250 260 270 280 290 300
pF1KE1 GETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPP
:. : :: .: : : : : .: :::: ::.:. : :: ::.: :: : .:
CCDS33 GDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKE
1130 1140 1150 1160 1170 1180
310 320 330 340 350
pF1KE1 GINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPG-TKGGPGD-QG---EPGPQG
: : : : ::..::.:.:: : ::. : : :: :: .. :: .: : :.
CCDS33 GNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDP
1190 1200 1210 1220 1230 1240
360 370 380 390 400 410
pF1KE1 LPGFS----GPPGK-EGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGP
:: :. .: : . .::
CCDS33 LPEFTEDQAAPDDKNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQ
1250 1260 1270 1280 1290 1300
>>CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 5784 init1: 1264 opt: 1876 Z-score: 791.6 bits: 158.3 E(32554): 9e-38
Smith-Waterman score: 1971; 46.7% identity (56.9% similar) in 670 aa overlap (27-650:916-1558)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPP
:: ::::: : : :: :..: :: :::
CCDS75 GFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPP
890 900 910 920 930 940
60 70 80 90 100 110
pF1KE1 GKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPG------PP
:. :: ::.: : :: :: : :: ::: : :. : :. : : :: :: :
CCDS75 GERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPT
950 960 970 980 990 1000
120 130 140 150 160
pF1KE1 GLPGP----GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGL
: :: : ::::::: :::: : .: :::::: : : :::: : :: .::
CCDS75 GETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD-RGL
1010 1020 1030 1040 1050 1060
170 180 190 200 210 220
pF1KE1 EG--SADFLCPTNCPPGMKGP---PGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGE
: .: : .. ::: :: :: .: : :: :: : :: :: ::: :. :: ::
CCDS75 PGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGE
1070 1080 1090 1100 1110 1120
230 240 250 260
pF1KE1 QGIPGP------------PGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGP
.: :: ::: : : :: : ::: : : :: : : :::: ::
CCDS75 KGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGP
1130 1140 1150 1160 1170 1180
270 280 290 300 310 320
pF1KE1 RGPPGRAGEKGDEGSPGIRGPQGI------TGPKGATGPPGINGKDGTPGTPGMKGSAGQ
.:: :. : .: .: :: :: ::. ::.: :::: : .: :: :: :: .:.
CCDS75 QGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGD
1190 1200 1210 1220 1230 1240
330 340 350 360 370 380
pF1KE1 AGQ---PGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGP
.:: :: :: .: .:.:: : .: :: :.:: : .: ::. :::: :: ::
CCDS75 VGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGE---KGEPGEAGEPGLPGEGGP
1250 1260 1270 1280 1290 1300
390 400 410 420 430 440
pF1KE1 QGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGK
: :..:..:: :: : :: : .:: :..:: : ::: :.:: : : :: .: :
CCDS75 PGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP
1310 1320 1330 1340 1350 1360
450 460 470 480 490
pF1KE1 VGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGP---SGDAGAPGVQGYPGPPGP
:: : : ::. : : .:::::.: : :: :: :: .:. :: : : ::::
CCDS75 PGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGK
1370 1380 1390 1400 1410 1420
500 510 520 530 540 550
pF1KE1 RGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGP
: : .:.::.:: .:..: . ..: .. :. : ::
CCDS75 TGPIGPQGAPGKPGPDGLRG---------------IPGPVGEQGLP------GSPGPDGP
1430 1440 1450 1460
560 570 580 590 600 610
pF1KE1 PGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVG-RGHPGM
::: :::: :: .: : : .: ::..: .: :. : :: :: : : : .:. :.
CCDS75 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI
1470 1480 1490 1500 1510 1520
620 630 640 650 660 670
pF1KE1 --P----GPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACL
: :::: ::::: :: .: :. : : ::::
CCDS75 TGPSGPIGPPGPPGLPGPPGP--KGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPI
1530 1540 1550 1560 1570
680
pF1KE1 GASAYASARLTEPGSIKGP
CCDS75 QASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPART
1580 1590 1600 1610 1620 1630
>--
initn: 3776 init1: 1012 opt: 1370 Z-score: 584.0 bits: 119.9 E(32554): 3.3e-26
Smith-Waterman score: 1393; 41.3% identity (56.4% similar) in 550 aa overlap (21-517:372-913)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGID
: :.: .. . . :.:: :.: ..
CCDS75 PSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLE
350 360 370 380 390 400
60 70 80 90 100
pF1KE1 GD-------NGPPGKAGPP-GPKGEPGKAGPDGPDGKPGI-DGLTGAKGEPGPMGIPGVK
:. : . : : . :.. :: : .. : .:. : .:: : : :..
CCDS75 GEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAII
410 420 430 440 450 460
110 120 130 140 150
pF1KE1 GQPGL--PGPPGLPGP-GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGK--
.::. :::: :: :. :::: ::.: :. : ::: : :: : .: :::::
CCDS75 -EPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTML
470 480 490 500 510 520
160 170 180 190 200
pF1KE1 --PGRPGTIQGLEGSADFLCPTNCPPG----------MKGPPGLQGVKGHAGKRGILGDP
: : : : :: . .. . ..:: : .:. .:. : .: :
CCDS75 MLPFRFGG-GGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGL---TGRPGPVGPP
530 540 550 560 570
210 220 230 240 250
pF1KE1 GHQGKPGPKGDVGASGEQGIPGPPGP------------QGIRGYPGMAGPKGETGPHGYK
: : : :::: .: .:. ::::: .: ::.::..::::. : :
CCDS75 GSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLA
580 590 600 610 620 630
260 270 280 290 300
pF1KE1 GMVGAIGATGPPGEEGPRGPPGRAGEKGDEGS------PGIRGPQGITGPKGATGPPGIN
:. : : : :: :: :::: ::.::.: :: ::.:. :::: ::::
CCDS75 GLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPP
640 650 660 670 680 690
310 320 330 340 350 360
pF1KE1 GKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPP
: : : :: ::..: :.:: ::.:: :. : :: .:. : :: :: : ::. : :
CCDS75 GVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMP
700 710 720 730 740 750
370 380 390 400 410
pF1KE1 GKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGP---------KGEQGPPGIP
: .: :: :. :: : : .: : .::.: :::.: .: :::.: :.:
CCDS75 GADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFP
760 770 780 790 800 810
420 430 440 450 460 470
pF1KE1 GPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYP
: .: :.:::.: : ::::. : : : : .:. : : :: ::. :: : ::::
CCDS75 GFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP
820 830 840 850 860 870
480 490 500 510 520 530
pF1KE1 GPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQL
: .: :. :.:: :: : :.::.::.:: .: .:
CCDS75 GRQGPKGSI---GFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPK
880 890 900 910 920 930
540 550 560 570 580 590
pF1KE1 AEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPK
CCDS75 GNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPP
940 950 960 970 980 990
>>CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 5784 init1: 1264 opt: 1876 Z-score: 791.6 bits: 158.3 E(32554): 9e-38
Smith-Waterman score: 1971; 46.7% identity (56.9% similar) in 670 aa overlap (27-650:916-1558)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPP
:: ::::: : : :: :..: :: :::
CCDS69 GFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPP
890 900 910 920 930 940
60 70 80 90 100 110
pF1KE1 GKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPG------PP
:. :: ::.: : :: :: : :: ::: : :. : :. : : :: :: :
CCDS69 GERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPT
950 960 970 980 990 1000
120 130 140 150 160
pF1KE1 GLPGP----GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGL
: :: : ::::::: :::: : .: :::::: : : :::: : :: .::
CCDS69 GETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD-RGL
1010 1020 1030 1040 1050 1060
170 180 190 200 210 220
pF1KE1 EG--SADFLCPTNCPPGMKGP---PGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGE
: .: : .. ::: :: :: .: : :: :: : :: :: ::: :. :: ::
CCDS69 PGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGE
1070 1080 1090 1100 1110 1120
230 240 250 260
pF1KE1 QGIPGP------------PGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGP
.: :: ::: : : :: : ::: : : :: : : :::: ::
CCDS69 KGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGP
1130 1140 1150 1160 1170 1180
270 280 290 300 310 320
pF1KE1 RGPPGRAGEKGDEGSPGIRGPQGI------TGPKGATGPPGINGKDGTPGTPGMKGSAGQ
.:: :. : .: .: :: :: ::. ::.: :::: : .: :: :: :: .:.
CCDS69 QGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGD
1190 1200 1210 1220 1230 1240
330 340 350 360 370 380
pF1KE1 AGQ---PGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGP
.:: :: :: .: .:.:: : .: :: :.:: : .: ::. :::: :: ::
CCDS69 VGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGE---KGEPGEAGEPGLPGEGGP
1250 1260 1270 1280 1290 1300
390 400 410 420 430 440
pF1KE1 QGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGK
: :..:..:: :: : :: : .:: :..:: : ::: :.:: : : :: .: :
CCDS69 PGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP
1310 1320 1330 1340 1350 1360
450 460 470 480 490
pF1KE1 VGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGP---SGDAGAPGVQGYPGPPGP
:: : : ::. : : .:::::.: : :: :: :: .:. :: : : ::::
CCDS69 PGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGK
1370 1380 1390 1400 1410 1420
500 510 520 530 540 550
pF1KE1 RGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGP
: : .:.::.:: .:..: . ..: .. :. : ::
CCDS69 TGPIGPQGAPGKPGPDGLRG---------------IPGPVGEQGLP------GSPGPDGP
1430 1440 1450 1460
560 570 580 590 600 610
pF1KE1 PGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVG-RGHPGM
::: :::: :: .: : : .: ::..: .: :. : :: :: : : : .:. :.
CCDS69 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI
1470 1480 1490 1500 1510 1520
620 630 640 650 660 670
pF1KE1 --P----GPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACL
: :::: ::::: :: .: :. : : ::::
CCDS69 TGPSGPIGPPGPPGLPGPPGP--KGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPI
1530 1540 1550 1560 1570
680
pF1KE1 GASAYASARLTEPGSIKGP
CCDS69 QASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPART
1580 1590 1600 1610 1620 1630
>--
initn: 3776 init1: 1012 opt: 1370 Z-score: 584.0 bits: 119.9 E(32554): 3.3e-26
Smith-Waterman score: 1393; 41.3% identity (56.4% similar) in 550 aa overlap (21-517:372-913)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGID
: :.: .. . . :.:: :.: ..
CCDS69 PSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLE
350 360 370 380 390 400
60 70 80 90 100
pF1KE1 GD-------NGPPGKAGPP-GPKGEPGKAGPDGPDGKPGI-DGLTGAKGEPGPMGIPGVK
:. : . : : . :.. :: : .. : .:. : .:: : : :..
CCDS69 GEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAII
410 420 430 440 450 460
110 120 130 140 150
pF1KE1 GQPGL--PGPPGLPGP-GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGK--
.::. :::: :: :. :::: ::.: :. : ::: : :: : .: :::::
CCDS69 -EPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTML
470 480 490 500 510 520
160 170 180 190 200
pF1KE1 --PGRPGTIQGLEGSADFLCPTNCPPG----------MKGPPGLQGVKGHAGKRGILGDP
: : : : :: . .. . ..:: : .:. .:. : .: :
CCDS69 MLPFRFGG-GGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGL---TGRPGPVGPP
530 540 550 560 570
210 220 230 240 250
pF1KE1 GHQGKPGPKGDVGASGEQGIPGPPGP------------QGIRGYPGMAGPKGETGPHGYK
: : : :::: .: .:. ::::: .: ::.::..::::. : :
CCDS69 GSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLA
580 590 600 610 620 630
260 270 280 290 300
pF1KE1 GMVGAIGATGPPGEEGPRGPPGRAGEKGDEGS------PGIRGPQGITGPKGATGPPGIN
:. : : : :: :: :::: ::.::.: :: ::.:. :::: ::::
CCDS69 GLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPP
640 650 660 670 680 690
310 320 330 340 350 360
pF1KE1 GKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPP
: : : :: ::..: :.:: ::.:: :. : :: .:. : :: :: : ::. : :
CCDS69 GVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMP
700 710 720 730 740 750
370 380 390 400 410
pF1KE1 GKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGP---------KGEQGPPGIP
: .: :: :. :: : : .: : .::.: :::.: .: :::.: :.:
CCDS69 GADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFP
760 770 780 790 800 810
420 430 440 450 460 470
pF1KE1 GPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYP
: .: :.:::.: : ::::. : : : : .:. : : :: ::. :: : ::::
CCDS69 GFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP
820 830 840 850 860 870
480 490 500 510 520 530
pF1KE1 GPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQL
: .: :. :.:: :: : :.::.::.:: .: .:
CCDS69 GRQGPKGSI---GFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPK
880 890 900 910 920 930
540 550 560 570 580 590
pF1KE1 AEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPK
CCDS69 GNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPP
940 950 960 970 980 990
>>CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690 aa)
initn: 4540 init1: 1219 opt: 1839 Z-score: 776.7 bits: 155.5 E(32554): 6e-37
Smith-Waterman score: 1974; 46.3% identity (58.1% similar) in 669 aa overlap (27-662:770-1421)
10 20 30 40 50
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPP
:: : :: :: : :: :..: :: :::
CCDS78 GFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPP
740 750 760 770 780 790
60 70 80 90 100
pF1KE1 GKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPG-------P
:. :: ::.: : :: :: : :: ::: : :. : :. : : :: :: :
CCDS78 GERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPG-PGGVVGPQGP
800 810 820 830 840 850
110 120 130 140 150 160
pF1KE1 PGLPGP----GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQG
: :: : ::::::: :::: : .: ::::::.: :: :: : : :: .:
CCDS78 TGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGE-RG
860 870 880 890 900 910
170 180 190 200 210 220
pF1KE1 LEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIP
: :: .: :::.: .: : : .:.::..:. : : .: :. :
CCDS78 L-------------PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ
920 930 940 950 960
230 240 250 260 270 280
pF1KE1 GPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGP---PGEEGPRGPPGRAGEKGDE
::::: : .: :: ::.: .: : .: :: : .:: :::.: .: :. :.::..
CCDS78 GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK
970 980 990 1000 1010 1020
290 300 310 320 330
pF1KE1 GSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ------PGSPGHQGVA
:. : :: : : .: .: ::: : :: :: :..: :: :. :: :: :.
CCDS78 GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
1030 1040 1050 1060 1070 1080
340 350 360 370 380 390
pF1KE1 GVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPV
:.:: :: :: :: : :: : :: :: : .: ::.: : : .: :..:: : .
CCDS78 GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA
1090 1100 1110 1120 1130 1140
400 410 420 430 440 450
pF1KE1 GQPGPQGRQG---PKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGK---VGDPGVAGLP
:.::: :. : ::::.: : :: : : : :: :: ::.:. :: :: : :
CCDS78 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
1150 1160 1170 1180 1190 1200
460 470 480 490 500 510
pF1KE1 GEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQP
:: : :..: : ::..: :.:: :::::.:: :: : :::: : : .: :
CCDS78 GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK
1210 1220 1230 1240 1250 1260
520 530 540 550 560
pF1KE1 GRQGVEGRDATDQHI--VDVALKMLQEQLAEVAVSAKREAL-GAVGMMGPPGPPGPPGYP
:. :.:: . . : : : : . . ...: ::.:. ::::: :::: :
CCDS78 GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP
1270 1280 1290 1300 1310 1320
570 580 590 600 610 620
pF1KE1 GKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRG---EKGDPGEVGRGH-PGMPGPPGIP
: .: : : .: ::..: .: :. : :: :: .:.:: : : :: :: : :
CCDS78 GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP
1330 1340 1350 1360 1370 1380
630 640 650 660 670 680
pF1KE1 GLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEP
: :: :: .: :..:: : :. : ::::: : ::
CCDS78 GPPGLPGP--QGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHT
1390 1400 1410 1420 1430 1440
pF1KE1 GSIKGP
CCDS78 EGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFP
1450 1460 1470 1480 1490 1500
>--
initn: 1968 init1: 997 opt: 1213 Z-score: 519.9 bits: 107.9 E(32554): 1.2e-22
Smith-Waterman score: 1348; 43.1% identity (56.2% similar) in 511 aa overlap (20-517:295-767)
10 20 30 40
pF1KE1 MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGV--PGSD
.: ..: : : : : : :.: ::
CCDS78 DIIEYDYEYGEAEYKEAESVTEGPTVTEETIAQTEINGH-GAYGEKGQKGEPAVVEPGML
270 280 290 300 310 320
50 60 70 80 90 100
pF1KE1 GIDGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLP
.. :::: ::: : : :: :: :: : :: . :: : ::. : :::
CCDS78 -VE---GPPGPAGPAGIMGPPGLQGPTGPPGDPG---------DRGPPGRPGLPGADGLP
330 340 350 360 370
110 120 130 140 150 160
pF1KE1 GPPG--LPGPGFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQG
:::: : : : : ::. : .. . . . ::::: : :::: . :
CCDS78 GPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAIL-QQARIALRGPPGPMGLTGRPGPVGG
380 390 400 410 420
170 180 190 200 210 220
pF1KE1 LEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIP
:: .: : .: : : ::. : :: :::: .: ::.: .:.:
CCDS78 --------------PGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMP
430 440 450 460 470
230 240 250 260 270 280
pF1KE1 GPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSP
: :: .: ::. :. : :. .:..: : : ::::..: :: . :: : .: :
CCDS78 GEPGAKGDRGFDGLPGLPGD---KGHRGERGPQGPPGPPGDDGMRG---EDGEIGPRGLP
480 490 500 510 520
290 300 310 320 330 340
pF1KE1 GIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGVAGVPGQPGTK
: ::.:. ::.:. : :: : :. : :: ::. : :.:: ::.:: : : :: .
CCDS78 GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQ
530 540 550 560 570 580
350 360 370 380 390 400
pF1KE1 GGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQ
: : :: :::: ::..: :: .: :: :. : .: : : : .::.: :::.: .
CCDS78 GPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVK
590 600 610 620 630 640
410 420 430 440 450
pF1KE1 GP---------KGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEK
: :::.: :.:: .: :.:::.: :. ::::. : : : : :.
CCDS78 GADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDP
650 660 670 680 690 700
460 470 480 490 500 510
pF1KE1 GESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVE
: ::. : ::. :: : ::::: .: :. :.:: :: : : ::: :.:: .: .
CCDS78 GPSGQAGEKGKLGVPGLPGYPGRQGPKGST---GFPGFPGANGEKGARGVAGKPGPRGQR
710 720 730 740 750 760
520 530 540 550 560 570
pF1KE1 GRDATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHP
:
CCDS78 GPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKD
770 780 790 800 810 820
689 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:21:37 2016 done: Sun Nov 6 19:21:38 2016
Total Scan time: 3.750 Total Display time: 0.230
Function used was FASTA [36.3.4 Apr, 2011]