Result of FASTA (omim) for
pFN21AE1160
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1160, 527 aa
1>>>pF1KE1160 527 - 527 aa - 527 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5809+/-0.000352; mu= 6.1689+/- 0.022
mean_var=230.5304+/-48.611, 0's: 0 Z-trim(121.7): 288 B-trim: 2162 in 1/57
Lambda= 0.084471
statistics sampled from 38331 (38645) to 38331 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.453), width: 16
Scan time: 11.600
The best scores are: opt bits E(85289)
NP_443108 (OMIM: 610672) nucleus accumbens-associa ( 527) 3522 442.0 2.1e-123
XP_005259778 (OMIM: 610672) PREDICTED: nucleus acc ( 527) 3522 442.0 2.1e-123
XP_011516523 (OMIM: 615786) PREDICTED: nucleus acc ( 587) 1020 137.1 1.4e-31
NP_653254 (OMIM: 615786) nucleus accumbens-associa ( 587) 1020 137.1 1.4e-31
NP_001092740 (OMIM: 611692) zinc finger and BTB do ( 500) 393 60.6 1.3e-08
XP_011517001 (OMIM: 611692) PREDICTED: zinc finger ( 504) 393 60.6 1.3e-08
XP_005252046 (OMIM: 611692) PREDICTED: zinc finger ( 514) 393 60.6 1.3e-08
NP_001138810 (OMIM: 611439) zinc finger and BTB do ( 634) 344 54.7 9.4e-07
NP_005444 (OMIM: 611439) zinc finger and BTB domai ( 634) 344 54.7 9.4e-07
XP_011526851 (OMIM: 614639) PREDICTED: zinc finger ( 415) 295 48.6 4.3e-05
XP_016883156 (OMIM: 614639) PREDICTED: zinc finger ( 432) 295 48.6 4.5e-05
XP_006723763 (OMIM: 614639) PREDICTED: zinc finger ( 589) 295 48.7 5.6e-05
XP_011526850 (OMIM: 614639) PREDICTED: zinc finger ( 589) 295 48.7 5.6e-05
NP_079500 (OMIM: 614639) zinc finger and BTB domai ( 589) 295 48.7 5.6e-05
XP_005260252 (OMIM: 614639) PREDICTED: zinc finger ( 589) 295 48.7 5.6e-05
XP_005260255 (OMIM: 614639) PREDICTED: zinc finger ( 589) 295 48.7 5.6e-05
XP_005260254 (OMIM: 614639) PREDICTED: zinc finger ( 589) 295 48.7 5.6e-05
XP_005260253 (OMIM: 614639) PREDICTED: zinc finger ( 589) 295 48.7 5.6e-05
NP_001157815 (OMIM: 259050,606025) zinc finger and ( 668) 290 48.2 9.4e-05
NP_001157819 (OMIM: 259050,606025) zinc finger and ( 668) 290 48.2 9.4e-05
NP_001157817 (OMIM: 259050,606025) zinc finger and ( 668) 290 48.2 9.4e-05
NP_001157818 (OMIM: 259050,606025) zinc finger and ( 668) 290 48.2 9.4e-05
NP_001157816 (OMIM: 259050,606025) zinc finger and ( 668) 290 48.2 9.4e-05
NP_056457 (OMIM: 259050,606025) zinc finger and BT ( 668) 290 48.2 9.4e-05
NP_001157814 (OMIM: 259050,606025) zinc finger and ( 741) 290 48.2 0.0001
XP_005248008 (OMIM: 616238) PREDICTED: zinc finger ( 466) 259 44.3 0.00099
XP_011511718 (OMIM: 616238) PREDICTED: zinc finger ( 643) 259 44.4 0.0012
XP_016856600 (OMIM: 165270) PREDICTED: zinc finger ( 376) 254 43.6 0.0013
XP_016856599 (OMIM: 165270) PREDICTED: zinc finger ( 394) 254 43.6 0.0013
NP_660334 (OMIM: 616238) zinc finger and BTB domai ( 765) 259 44.5 0.0014
NP_001317554 (OMIM: 616238) zinc finger and BTB do ( 765) 259 44.5 0.0014
NP_003434 (OMIM: 604084) zinc finger and BTB domai ( 803) 259 44.5 0.0015
NP_001274532 (OMIM: 604084) zinc finger and BTB do ( 810) 259 44.5 0.0015
NP_001265577 (OMIM: 165270) zinc finger and BTB do ( 688) 254 43.8 0.002
NP_001265576 (OMIM: 165270) zinc finger and BTB do ( 688) 254 43.8 0.002
NP_005332 (OMIM: 165270) zinc finger and BTB domai ( 688) 254 43.8 0.002
NP_003400 (OMIM: 602126) zinc finger and BTB domai ( 449) 246 42.7 0.0029
NP_001230631 (OMIM: 602126) zinc finger and BTB do ( 449) 246 42.7 0.0029
NP_001137295 (OMIM: 602126) zinc finger and BTB do ( 449) 246 42.7 0.0029
NP_001230633 (OMIM: 602126) zinc finger and BTB do ( 449) 246 42.7 0.0029
NP_065912 (OMIM: 616595) zinc finger and BTB domai ( 514) 247 42.8 0.0029
XP_011534306 (OMIM: 616595) PREDICTED: zinc finger ( 514) 247 42.8 0.0029
XP_005267133 (OMIM: 616595) PREDICTED: zinc finger ( 514) 247 42.8 0.0029
NP_001171671 (OMIM: 300329) transcriptional regula ( 672) 247 43.0 0.0036
NP_006768 (OMIM: 300329) transcriptional regulator ( 672) 247 43.0 0.0036
XP_011524173 (OMIM: 616591) PREDICTED: zinc finger ( 619) 246 42.8 0.0036
XP_016881098 (OMIM: 616591) PREDICTED: zinc finger ( 619) 246 42.8 0.0036
NP_001034449 (OMIM: 616591) zinc finger and BTB do ( 619) 246 42.8 0.0036
NP_001305770 (OMIM: 616591) zinc finger and BTB do ( 619) 246 42.8 0.0036
XP_005258286 (OMIM: 616591) PREDICTED: zinc finger ( 619) 246 42.8 0.0036
>>NP_443108 (OMIM: 610672) nucleus accumbens-associated (527 aa)
initn: 3522 init1: 3522 opt: 3522 Z-score: 2336.4 bits: 442.0 E(85289): 2.1e-123
Smith-Waterman score: 3522; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 QPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDGGEEGMDEQYRQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 QPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDGGEEGMDEQYRQI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 CNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 CNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 DEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 DEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 RSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWMPKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 RSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWMPKVK
430 440 450 460 470 480
490 500 510 520
pF1KE1 VLKAEDDAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ
:::::::::::::::::::::::::::::::::::::::::::::::
NP_443 VLKAEDDAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ
490 500 510 520
>>XP_005259778 (OMIM: 610672) PREDICTED: nucleus accumbe (527 aa)
initn: 3522 init1: 3522 opt: 3522 Z-score: 2336.4 bits: 442.0 E(85289): 2.1e-123
Smith-Waterman score: 3522; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 QPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDGGEEGMDEQYRQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDGGEEGMDEQYRQI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 CNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 DEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 RSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWMPKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWMPKVK
430 440 450 460 470 480
490 500 510 520
pF1KE1 VLKAEDDAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ
:::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLKAEDDAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ
490 500 510 520
>>XP_011516523 (OMIM: 615786) PREDICTED: nucleus accumbe (587 aa)
initn: 1662 init1: 800 opt: 1020 Z-score: 687.9 bits: 137.1 E(85289): 1.4e-31
Smith-Waterman score: 1666; 56.2% identity (73.9% similar) in 514 aa overlap (1-501:1-478)
10 20 30 40 50 60
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN
:.: :..:::::::..: ::::::: :::::::.::::.::::::::::::: ::::::.
XP_011 MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF
.. ... :::..: : :::::::::::::.:....:...::::::::::.:.:.::...
XP_011 GNSKSAFELPGSVPPACFQQILSFCYTGRLTMTASEQLVVMYTAGFLQIQHIVERGTDLM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP
.::::: :::: :.: .:::::: : . :: .. : : : :: .:
XP_011 FKVSSPHCDSQTAVIEDA-GSEPQSPCNQLQ--PAAAAAAPYVV--------SPSVP-IP
130 140 150 160
190 200 210 220 230 240
pF1KE1 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG
. :. ... .: : :: .:: . : . :..:: :::::..
XP_011 LLTRVKHEAMELPPAG------------PGLAPKRPLETGP--RDGVAVAAGAAVAAGTA
170 180 190 200 210
250 260 270 280
pF1KE1 Q---PA---GGVAAAGGVVSG----P-STSERTSPGTSSAYTSDSPGSYHNEEDEEEDGG
: :: . . .. : : .::::::.:: :.::: :::::::::.: .
XP_011 PLKLPRVSYYGVPSLATLIPGIQQMPYPQGERTSPGASSLPTTDSPTSYHNEEDEEDDEA
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE1 EEGM-DEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELI
. : .::: : :: : :. : :. :: : :::. . .:.::..::: ::
XP_011 YDTMVEEQYGQ---MYIKAS----GSYA--VQEKPEPVPLESRSCVLIRRDLVALPASLI
280 290 300 310 320
350 360 370 380 390 400
pF1KE1 NQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFD
.::: :::::::.::::.::::::.:..:::::.::::::. ::..::::::::::.:::
XP_011 SQIGYRCHPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFD
330 340 350 360 370 380
410 420 430 440 450 460
pF1KE1 RNTLANSCGTGIRSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNAR
::::::::::::::::.:: :::::::::.::: :::::::.:::::::.::::::::::
XP_011 RNTLANSCGTGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNAR
390 400 410 420 430 440
470 480 490 500 510 520
pF1KE1 RVVRKSWMPKVKVLKAED-DAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ
:: :: :.::.: . : . : : .. .. :
XP_011 RV-RKRWLPKIKSMLPEGVEMYRTVMGSAAASVPLDPEFPPAAAQVFEQRIYAERRGDAA
450 460 470 480 490 500
XP_011 TIVALRTDAVNVDLSAAANPAFDAGEEVDGAGSVIQEVAAPEPLPADGQSPPQPFEQGGG
510 520 530 540 550 560
>>NP_653254 (OMIM: 615786) nucleus accumbens-associated (587 aa)
initn: 1662 init1: 800 opt: 1020 Z-score: 687.9 bits: 137.1 E(85289): 1.4e-31
Smith-Waterman score: 1666; 56.2% identity (73.9% similar) in 514 aa overlap (1-501:1-478)
10 20 30 40 50 60
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFN
:.: :..:::::::..: ::::::: :::::::.::::.::::::::::::: ::::::.
NP_653 MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFF
.. ... :::..: : :::::::::::::.:....:...::::::::::.:.:.::...
NP_653 GNSKSAFELPGSVPPACFQQILSFCYTGRLTMTASEQLVVMYTAGFLQIQHIVERGTDLM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLPLVSRVKTEQQESDSVQCMP
.::::: :::: :.: .:::::: : . :: .. : : : :: .:
NP_653 FKVSSPHCDSQTAVIEDA-GSEPQSPCNQLQ--PAAAAAAPYVV--------SPSVP-IP
130 140 150 160
190 200 210 220 230 240
pF1KE1 VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAG
. :. ... .: : :: .:: . : . :..:: :::::..
NP_653 LLTRVKHEAMELPPAG------------PGLAPKRPLETGP--RDGVAVAAGAAVAAGTA
170 180 190 200 210
250 260 270 280
pF1KE1 Q---PA---GGVAAAGGVVSG----P-STSERTSPGTSSAYTSDSPGSYHNEEDEEEDGG
: :: . . .. : : .::::::.:: :.::: :::::::::.: .
NP_653 PLKLPRVSYYGVPSLATLIPGIQQMPYPQGERTSPGASSLPTTDSPTSYHNEEDEEDDEA
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE1 EEGM-DEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELI
. : .::: : :: : :. : :. :: : :::. . .:.::..::: ::
NP_653 YDTMVEEQYGQ---MYIKAS----GSYA--VQEKPEPVPLESRSCVLIRRDLVALPASLI
280 290 300 310 320
350 360 370 380 390 400
pF1KE1 NQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFD
.::: :::::::.::::.::::::.:..:::::.::::::. ::..::::::::::.:::
NP_653 SQIGYRCHPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFD
330 340 350 360 370 380
410 420 430 440 450 460
pF1KE1 RNTLANSCGTGIRSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNAR
::::::::::::::::.:: :::::::::.::: :::::::.:::::::.::::::::::
NP_653 RNTLANSCGTGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNAR
390 400 410 420 430 440
470 480 490 500 510 520
pF1KE1 RVVRKSWMPKVKVLKAED-DAYTTFISETGKIEPDMMGVEHGFETASHEGEAGPSAEALQ
:: :: :.::.: . : . : : .. .. :
NP_653 RV-RKRWLPKIKSMLPEGVEMYRTVMGSAAASVPLDPEFPPAAAQVFEQRIYAERRGDAA
450 460 470 480 490 500
NP_653 TIVALRTDAVNVDLSAAANPAFDAGEEVDGAGSVIQEVAAPEPLPADGQSPPQPFEQGGG
510 520 530 540 550 560
>>NP_001092740 (OMIM: 611692) zinc finger and BTB domain (500 aa)
initn: 371 init1: 346 opt: 393 Z-score: 275.8 bits: 60.6 E(85289): 1.3e-08
Smith-Waterman score: 393; 35.4% identity (65.5% similar) in 206 aa overlap (5-200:7-209)
10 20 30 40 50
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDL
.:...:......: ::: :::: ::. : ..:. :.::.::::::: ::::
NP_001 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 FNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTE
: . . . . .:. :.:.::::::::.:... : .. .:.:::.: ...: :.
NP_001 SALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FFL----KVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGW--PACSTPLPLVSRVKTEQQE
.. :.: . :: . ::: : : .. : ..: . :. .: : :. .
NP_001 ILESIHSKISVGDVDSVTVGAEENP--ESRNGVKDSSFFANPVEISP-PYCSQGRQPTAS
130 140 150 160 170
180 190 200 210 220
pF1KE1 SD-SVQCMP---VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQAPVV
:: .. : . .:: . :... :..:. :
NP_001 SDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 AAAQPAVAAGAGQPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDG
NP_001 MEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHAYSYSQAASQPTNVSE
240 250 260 270 280 290
>>XP_011517001 (OMIM: 611692) PREDICTED: zinc finger and (504 aa)
initn: 371 init1: 346 opt: 393 Z-score: 275.8 bits: 60.6 E(85289): 1.3e-08
Smith-Waterman score: 393; 35.4% identity (65.5% similar) in 206 aa overlap (5-200:11-213)
10 20 30 40 50
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSY
.:...:......: ::: :::: ::. : ..:. :.::.::::::: :
XP_011 MSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 FRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIME
::: : . . . . .:. :.:.::::::::.:... : .. .:.:::.: ...
XP_011 FRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVID
70 80 90 100 110 120
120 130 140 150 160
pF1KE1 KGTEFFL----KVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGW--PACSTPLPLVSRVKT
: :... :.: . :: . ::: : : .. : ..: . :. .: : :. .
XP_011 KCTQILESIHSKISVGDVDSVTVGAEENP--ESRNGVKDSSFFANPVEISP-PYCSQGRQ
130 140 150 160 170
170 180 190 200 210 220
pF1KE1 EQQESD-SVQCMP---VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAANRPHQPPPPQQ
:: .. : . .:: . :... :..:. :
XP_011 PTASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEIQIEGDHEQGDLLVRESQITE
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 APVVAAAQPAVAAGAGQPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDE
XP_011 VKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHAYSYSQAASQPT
240 250 260 270 280 290
>>XP_005252046 (OMIM: 611692) PREDICTED: zinc finger and (514 aa)
initn: 371 init1: 346 opt: 393 Z-score: 275.7 bits: 60.6 E(85289): 1.3e-08
Smith-Waterman score: 393; 35.4% identity (65.5% similar) in 206 aa overlap (5-200:21-223)
10 20 30 40
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAH
.:...:......: ::: :::: ::. : ..:. :.::
XP_005 MEECKSRVRFMSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 RAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTA
.::::::: :::: : . . . . .:. :.:.::::::::.:... : .. .:
XP_005 KAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAA
70 80 90 100 110 120
110 120 130 140 150
pF1KE1 GFLQIQEIMEKGTEFFL----KVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGW--PACST
.:::.: ...: :... :.: . :: . ::: : : .. : ..: . :. .
XP_005 SFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENP--ESRNGVKDSSFFANPVEIS
130 140 150 160 170
160 170 180 190 200 210
pF1KE1 PLPLVSRVKTEQQESD-SVQCMP---VAKRLWDSGQKEAGGGGNGSRKMAKFSTPDLAAN
: : :. . :: .. : . .:: . :... :..:. :
XP_005 P-PYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEIQIEGDHEQGD
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE1 RPHQPPPPQQAPVVAAAQPAVAAGAGQPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDS
XP_005 LLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHAY
240 250 260 270 280 290
>>NP_001138810 (OMIM: 611439) zinc finger and BTB domain (634 aa)
initn: 381 init1: 300 opt: 344 Z-score: 242.2 bits: 54.7 E(85289): 9.4e-07
Smith-Waterman score: 344; 34.4% identity (63.6% similar) in 209 aa overlap (2-202:29-236)
10 20 30
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVS
: .... .:. ...:: ::.::::: ::::
NP_001 MEPSPLSPSGAALPLPLSLAPPPLPLPAAAVVHVSFPEVTSALLESLNQQRLQGQLCDVS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 VVVKGHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMN
. :.:. :.:::::::::: ::.: . . . ::....: .:. .:. :::::::
NP_001 IRVQGREFRAHRAVLAASSPYFHDQVLLKGMTSISLPSVMDPGAFETVLASAYTGRLSMA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 VGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGW
..: .. ... ::. .:..: ::. :. . : . : . . : . : . ::
NP_001 AADIVNFLTVGSVLQMWHIVDKCTEL-LREGRASATTTITTAAATSVTVPGAGVPSGSGG
130 140 150 160 170
160 170 180 190 200
pF1KE1 ---PAC--STPLPLVSRVKTEQQESDSVQCMPVAKRLWDSGQKEAGGG---GNGSRKMAK
:: :. ::.. .:. :.: : . ..:...:: .. :.: :.
NP_001 TVAPATMGSARSHASSRASENQSPSSSNYFSPRESTDFSSSSQEAFAASAVGSGERRGGG
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE1 FSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAGQPAGGVAAAGGVVSGPSTSERTSPG
NP_001 PVFPAPVVGSGGATSGKLLLEADELCDDGGDGRGAVVPGAGLRRPTYTPPSIMPQKHWVY
240 250 260 270 280 290
>>NP_005444 (OMIM: 611439) zinc finger and BTB domain-co (634 aa)
initn: 381 init1: 300 opt: 344 Z-score: 242.2 bits: 54.7 E(85289): 9.4e-07
Smith-Waterman score: 344; 34.4% identity (63.6% similar) in 209 aa overlap (2-202:29-236)
10 20 30
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVS
: .... .:. ...:: ::.::::: ::::
NP_005 MEPSPLSPSGAALPLPLSLAPPPLPLPAAAVVHVSFPEVTSALLESLNQQRLQGQLCDVS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 VVVKGHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMN
. :.:. :.:::::::::: ::.: . . . ::....: .:. .:. :::::::
NP_005 IRVQGREFRAHRAVLAASSPYFHDQVLLKGMTSISLPSVMDPGAFETVLASAYTGRLSMA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 VGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGW
..: .. ... ::. .:..: ::. :. . : . : . . : . : . ::
NP_005 AADIVNFLTVGSVLQMWHIVDKCTEL-LREGRASATTTITTAAATSVTVPGAGVPSGSGG
130 140 150 160 170
160 170 180 190 200
pF1KE1 ---PAC--STPLPLVSRVKTEQQESDSVQCMPVAKRLWDSGQKEAGGG---GNGSRKMAK
:: :. ::.. .:. :.: : . ..:...:: .. :.: :.
NP_005 TVAPATMGSARSHASSRASENQSPSSSNYFSPRESTDFSSSSQEAFAASAVGSGERRGGG
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE1 FSTPDLAANRPHQPPPPQQAPVVAAAQPAVAAGAGQPAGGVAAAGGVVSGPSTSERTSPG
NP_005 PVFPAPVVGSGGATSGKLLLEADELCDDGGDGRGAVVPGAGLRRPTYTPPSIMPQKHWVY
240 250 260 270 280 290
>>XP_011526851 (OMIM: 614639) PREDICTED: zinc finger and (415 aa)
initn: 212 init1: 179 opt: 295 Z-score: 212.3 bits: 48.6 E(85289): 4.3e-05
Smith-Waterman score: 295; 28.0% identity (57.0% similar) in 293 aa overlap (7-287:8-289)
10 20 30 40 50
pF1KE1 MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLF
::: . .:. ::::: .:. ::: :::.:..::::. :: .:: ::. :.
XP_011 MNNRKEDMEITSHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 ----NNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEK
..:..:.: : :.:. :..: :...:... . . .: .:.:::. .:..
XP_011 CQVQKTSEQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 GTEFF---LKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSGWPACSTPLP-LVSRVKTEQQ
.:. : .: : :. : : .: .: : :. : . : :. :.. ..
XP_011 CHDFIKAALDISIKSDASDELAEFEIGASSSSSTEALISAVMAGRSISPWLARRTSPANS
130 140 150 160 170 180
180 190 200 210 220
pF1KE1 ESDSVQCMPVAKRLWDSGQKEAGGGGNGSR-KMAKFSTPDLAANRPHQPPPPQQAPV-VA
.::. .: . . ::.. :.. . : . :: ....: : .:. .
XP_011 SGDSA----IA-------SCHDGGSSYGKEDQEPKADGPDDVSSQPLWPGDVGYGPLRIK
190 200 210 220
230 240 250 260 270 280
pF1KE1 AAQ--PAVAAGAGQPAGGVAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEED
: :. .:. :.. .:. . : :... .: ... : .. :.:
XP_011 EEQVSPSQYGGSELPSAKDGAVQNSFSEQSAGDAWQPTGRRKNRKNKETVRHITQQVEDD
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE1 GGEEGMDEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAEL
XP_011 SRASSPVPSFLPTSGWPFSSRDSNADLSVTEASSSDSRGERAELYAQVEEGLLGGEASYL
290 300 310 320 330 340
527 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:40:50 2016 done: Sat Nov 5 02:40:52 2016
Total Scan time: 11.600 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]