Result of FASTA (omim) for
pFN21AE1144
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1144, 428 aa
1>>>pF1KE1144 428 - 428 aa - 428 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0920+/-0.000409; mu= 18.4490+/- 0.025
mean_var=71.3179+/-14.611, 0's: 0 Z-trim(111.4): 66 B-trim: 30 in 1/49
Lambda= 0.151871
statistics sampled from 19927 (19992) to 19927 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.608), E-opt: 0.2 (0.234), width: 16
Scan time: 9.030
The best scores are: opt bits E(85289)
NP_036290 (OMIM: 605653) F-box/LRR-repeat protein ( 428) 2891 643.0 4.2e-184
XP_005266393 (OMIM: 605653) PREDICTED: F-box/LRR-r ( 428) 2891 643.0 4.2e-184
NP_036291 (OMIM: 609087) F-box/LRR-repeat protein ( 434) 2106 471.0 2.5e-132
XP_005266394 (OMIM: 605653) PREDICTED: F-box/LRR-r ( 276) 1864 417.9 1.6e-116
XP_016876027 (OMIM: 605653) PREDICTED: F-box/LRR-r ( 250) 1425 321.7 1.4e-87
NP_060848 (OMIM: 609077) F-box/LRR-repeat protein ( 374) 199 53.2 1.4e-06
XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 180 49.0 2.5e-05
XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 180 49.0 2.6e-05
NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 180 49.0 2.6e-05
XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 169 46.8 0.00019
NP_001104508 (OMIM: 609080) F-box/LRR-repeat prote ( 690) 169 46.8 0.00021
NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 169 46.8 0.00021
NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 169 46.8 0.00022
XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 169 46.8 0.00022
XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 169 46.8 0.00022
XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 169 46.8 0.00022
XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 169 46.8 0.00023
XP_005250265 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 169 46.8 0.00023
XP_011514231 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 783) 169 46.8 0.00023
XP_011514230 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 797) 169 46.8 0.00023
XP_016867340 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 809) 169 46.8 0.00023
XP_016867339 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 822) 169 46.8 0.00024
XP_005250262 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 825) 169 46.8 0.00024
XP_016879772 (OMIM: 609106) PREDICTED: F-box only ( 383) 153 43.1 0.0015
XP_011521999 (OMIM: 609106) PREDICTED: F-box only ( 442) 153 43.1 0.0017
NP_694962 (OMIM: 609106) F-box only protein 39 [Ho ( 442) 153 43.1 0.0017
XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 142 40.7 0.0089
NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 142 40.7 0.0089
NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 142 40.8 0.0096
>>NP_036290 (OMIM: 605653) F-box/LRR-repeat protein 3 [H (428 aa)
initn: 2891 init1: 2891 opt: 2891 Z-score: 3426.3 bits: 643.0 E(85289): 4.2e-184
Smith-Waterman score: 2891; 100.0% identity (100.0% similar) in 428 aa overlap (1-428:1-428)
10 20 30 40 50 60
pF1KE1 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW
370 380 390 400 410 420
pF1KE1 FPDMMPTW
::::::::
NP_036 FPDMMPTW
>>XP_005266393 (OMIM: 605653) PREDICTED: F-box/LRR-repea (428 aa)
initn: 2891 init1: 2891 opt: 2891 Z-score: 3426.3 bits: 643.0 E(85289): 4.2e-184
Smith-Waterman score: 2891; 100.0% identity (100.0% similar) in 428 aa overlap (1-428:1-428)
10 20 30 40 50 60
pF1KE1 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW
370 380 390 400 410 420
pF1KE1 FPDMMPTW
::::::::
XP_005 FPDMMPTW
>>NP_036291 (OMIM: 609087) F-box/LRR-repeat protein 21 [ (434 aa)
initn: 2116 init1: 2091 opt: 2106 Z-score: 2496.6 bits: 471.0 E(85289): 2.5e-132
Smith-Waterman score: 2106; 72.7% identity (89.7% similar) in 418 aa overlap (16-428:17-434)
10 20 30 40 50
pF1KE1 MKRGGRDSDRNSSEEGTAEKSK-----KLRTTNEHSQTCDWGNLLQDIILQVFKYLPLL
:.:.. : .: :. :. :::.: . ..::.:.:::::
NP_036 MKRNSLSVENKIVQLSGAAKQPKVGFYSSLNQTHTHTVLLDWGSLPHHVVLQIFQYLPLL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DRAHASQVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVS
::: ::.::: ::.:::. :::: ::::::: ::: .:.:::.::.::::.: ::::::
NP_036 DRACASSVCRRWNEVFHISDLWRKFEFELNQSATSSFKSTHPDLIQQIIKKHFAHLQYVS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FKVDSSKESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSL
:::::: :::::::::::::::::..::::::::.::::.. .:::.:::::::.:::::
NP_036 FKVDSSAESAEAACDILSQLVNCSIQTLGLISTAKPSFMNVSESHFVSALTVVFINSKSL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 SSLKIDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYH
::.::.::::::::::.:::::::::.: ::::::::: :::::::.:.:::::::::.
NP_036 SSIKIEDTPVDDPSLKILVANNSDTLRLPKMSSCPHVSSDGILCVADRCQGLRELALNYY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 LLSDELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFF
.:.:::.:::::: :: ::::::::::::::: .::...: ::::.:.:::.::.::.::
NP_036 ILTDELFLALSSETHVNLEHLRIDVVSENPGQIKFHAVKKHSWDALIKHSPRVNVVMHFF
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 LYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRI
::::::. ::. : :.::::::::::: ::::::..::::.::::::: :.:::.::: :
NP_036 LYEEEFETFFKEETPVTHLYFGRSVSKVVLGRVGLNCPRLIELVVCANDLQPLDNELICI
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 AERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSK
::.: ::.:.::..::::::::..::..: ::.:::.::::::::. :::..:: ::::
NP_036 AEHCTNLTALGLSKCEVSCSAFIRFVRLCERRLTQLSVMEEVLIPDEDYSLDEIHTEVSK
370 380 390 400 410 420
420
pF1KE1 HLGRVWFPDMMPTW
.::::::::.:: :
NP_036 YLGRVWFPDVMPLW
430
>>XP_005266394 (OMIM: 605653) PREDICTED: F-box/LRR-repea (276 aa)
initn: 1864 init1: 1864 opt: 1864 Z-score: 2212.8 bits: 417.9 E(85289): 1.6e-116
Smith-Waterman score: 1864; 100.0% identity (100.0% similar) in 276 aa overlap (153-428:1-276)
130 140 150 160 170 180
pF1KE1 SAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKIDDT
::::::::::::::::::::::::::::::
XP_005 MDLPKSHFISALTVVFVNSKSLSSLKIDDT
10 20 30
190 200 210 220 230 240
pF1KE1 PVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELLL
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE1 ALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEFDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEFDP
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE1 FFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKNLS
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE1 AIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVWFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVWFP
220 230 240 250 260 270
pF1KE1 DMMPTW
::::::
XP_005 DMMPTW
>>XP_016876027 (OMIM: 605653) PREDICTED: F-box/LRR-repea (250 aa)
initn: 1446 init1: 1425 opt: 1425 Z-score: 1693.6 bits: 321.7 E(85289): 1.4e-87
Smith-Waterman score: 1425; 99.5% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KE1 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL
::::::::::::::::::::::::::::::::::.:
XP_016 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAAISDRRRLCLLCQRLESTSQVCGLCP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF
XP_016 RLRTGVLPPG
250
>>NP_060848 (OMIM: 609077) F-box/LRR-repeat protein 8 [H (374 aa)
initn: 95 init1: 64 opt: 199 Z-score: 239.4 bits: 53.2 E(85289): 1.4e-06
Smith-Waterman score: 199; 24.0% identity (50.0% similar) in 362 aa overlap (39-383:8-351)
10 20 30 40 50 60
pF1KE1 DRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHASQVCRNWNQ
: .... .:..: : ::: :..::: :
NP_060 MAEPGEGLPEEVLALIFRHLSLRDRAAAARVCRAWAA
10 20 30
70 80 90 100 110 120
pF1KE1 VFHMPDLWR-----CFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSSKES
. .:. : : ::. ::.: .. :. .:.. : : :
NP_060 AATCSAVWHDTKISC-ECELEGMLPPYLSACLDHI-------HNLRLEFEP----SRKPS
40 50 60 70 80
130 140 150 160 170 180
pF1KE1 AEAACDILSQLVNCS--LKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKIDD
.:: ..: :.. . :. : : .. ..: .. . :. .: ...: : .
NP_060 RRAAIELLMVLAGRAPGLRGLRLECRGEKPLFDAGRD-VLEAVHAVCGAASQLRHLDLRR
90 100 110 120 130 140
190 200 210 220 230
pF1KE1 TPVD-DPSLKVLVANNSDTLKLLKMSSCP---HVSPAGILCVADQCHGLRELALNYHLLS
: .: . .: . :. : ... :.:...: . . : :: :.:. ::
NP_060 LSFTLDDALVLQAARSCPELHSLFLDNSTLVGSVGPGSVLELLEACPRLRALGLHLASLS
150 160 170 180 190 200
240 250 260 270 280 290
pF1KE1 DELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSP--KVNLVMYFFL
.: ::.. .. . : . . : ... . . .: :. :. : :.: . :
NP_060 HAILEALAAPDRAPFALLALRCAC--PEDARASPLPNEAWVALRRRHPGLAVELELEPAL
210 220 230 240 250 260
300 310 320 330 340 350
pF1KE1 YEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPR----LVELVVCANGLRPLDEEL
: .. .:.. : . ..: :..: : .. . : : : : . :. :
NP_060 PAESVTRVLQPAVPVAALRL--NLSGDTVGPVRFAAHHYAATLCALEVRAAASAELNAAL
270 280 290 300 310 320
360 370 380 390 400 410
pF1KE1 IRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWE
..: :: : . : :: :.. : :
NP_060 EELAARCAALREVHC-FCVVSHSVLDAFRAHCPRLRTYTLKLTREPHPWRPTLVA
330 340 350 360 370
420
pF1KE1 VSKHLGRVWFPDMMPTW
>>XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-repea (387 aa)
initn: 164 init1: 90 opt: 180 Z-score: 216.7 bits: 49.0 E(85289): 2.5e-05
Smith-Waterman score: 189; 22.6% identity (53.6% similar) in 371 aa overlap (39-391:8-359)
10 20 30 40 50 60
pF1KE1 DRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHASQVCRNWNQ
:. ... ..: :: . :...:.::: : .
XP_016 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRD
10 20 30
70 80 90 100 110 120
pF1KE1 VFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSSKESAEAAC
. . ..:: : .: .:. ..: :. .. : ..: .:.. : . ..
XP_016 AAYHKSVWRGVEAKL------HLRRANPSLFPSLQARGIRRVQILSLR-RSLSYVIQGMA
40 50 60 70 80 90
130 140 150 160 170
pF1KE1 DILS-QLVNC-SLKTLGL-------ISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKI
.: : .: .: .: :: :.. : ..: :. :.: . :.: :..
XP_016 NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE1 DD-TPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRE--LALNYHLL
. . . .: .:.: . . :: :.. :: :.: .:: .: . .. : :.:. :
XP_016 GGCSNITNTGL-LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL
160 170 180 190 200
240 250 260 270 280 290
pF1KE1 SDELLLALSSEKHVR--LEHLRIDVVSENPGQTH---FHTIQKSSWDAF-IRHSPKVNLV
.: :. : ::. : ::. .: : . .: . .: .. .: ... .
XP_016 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT
210 220 230 240 250 260
300 310 320 330 340 350
pF1KE1 MYFFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEE
. : . .. . . : .:. . :. ... : : .:. . :.
XP_016 GIMHL------AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHIS--DDG
270 280 290 300 310 320
360 370 380 390 400 410
pF1KE1 LIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHW
. :.... ..: ....:.: . .:.. .::::.
XP_016 INRMVRQMHGLRTLNIGQCVRITDKGLELIAE---HLSQLTGIDLYGCTRITKRGLERIT
330 340 350 360 370
420
pF1KE1 EVSKHLGRVWFPDMMPTW
XP_016 QLPCLKGLL
380
>>XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-repea (404 aa)
initn: 164 init1: 90 opt: 180 Z-score: 216.4 bits: 49.0 E(85289): 2.6e-05
Smith-Waterman score: 189; 22.6% identity (53.6% similar) in 371 aa overlap (39-391:8-359)
10 20 30 40 50 60
pF1KE1 DRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHASQVCRNWNQ
:. ... ..: :: . :...:.::: : .
XP_016 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRD
10 20 30
70 80 90 100 110 120
pF1KE1 VFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSSKESAEAAC
. . ..:: : .: .:. ..: :. .. : ..: .:.. : . ..
XP_016 AAYHKSVWRGVEAKL------HLRRANPSLFPSLQARGIRRVQILSLR-RSLSYVIQGMA
40 50 60 70 80 90
130 140 150 160 170
pF1KE1 DILS-QLVNC-SLKTLGL-------ISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKI
.: : .: .: .: :: :.. : ..: :. :.: . :.: :..
XP_016 NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE1 DD-TPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRE--LALNYHLL
. . . .: .:.: . . :: :.. :: :.: .:: .: . .. : :.:. :
XP_016 GGCSNITNTGL-LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL
160 170 180 190 200
240 250 260 270 280 290
pF1KE1 SDELLLALSSEKHVR--LEHLRIDVVSENPGQTH---FHTIQKSSWDAF-IRHSPKVNLV
.: :. : ::. : ::. .: : . .: . .: .. .: ... .
XP_016 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT
210 220 230 240 250 260
300 310 320 330 340 350
pF1KE1 MYFFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEE
. : . .. . . : .:. . :. ... : : .:. . :.
XP_016 GIMHL------AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHIS--DDG
270 280 290 300 310 320
360 370 380 390 400 410
pF1KE1 LIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHW
. :.... ..: ....:.: . .:.. .::::.
XP_016 INRMVRQMHGLRTLNIGQCVRITDKGLELIAE---HLSQLTGIDLYGCTRITKRGLERIT
330 340 350 360 370
420
pF1KE1 EVSKHLGRVWFPDMMPTW
XP_016 QLPCLKEARGDFSPLFTVRTRGSSRR
380 390 400
>>NP_689654 (OMIM: 609081) F-box/LRR-repeat protein 14 [ (418 aa)
initn: 164 init1: 90 opt: 180 Z-score: 216.2 bits: 49.0 E(85289): 2.6e-05
Smith-Waterman score: 189; 22.6% identity (53.6% similar) in 371 aa overlap (39-391:8-359)
10 20 30 40 50 60
pF1KE1 DRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHASQVCRNWNQ
:. ... ..: :: . :...:.::: : .
NP_689 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRD
10 20 30
70 80 90 100 110 120
pF1KE1 VFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSSKESAEAAC
. . ..:: : .: .:. ..: :. .. : ..: .:.. : . ..
NP_689 AAYHKSVWRGVEAKL------HLRRANPSLFPSLQARGIRRVQILSLR-RSLSYVIQGMA
40 50 60 70 80 90
130 140 150 160 170
pF1KE1 DILS-QLVNC-SLKTLGL-------ISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKI
.: : .: .: .: :: :.. : ..: :. :.: . :.: :..
NP_689 NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE1 DD-TPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRE--LALNYHLL
. . . .: .:.: . . :: :.. :: :.: .:: .: . .. : :.:. :
NP_689 GGCSNITNTGL-LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL
160 170 180 190 200
240 250 260 270 280 290
pF1KE1 SDELLLALSSEKHVR--LEHLRIDVVSENPGQTH---FHTIQKSSWDAF-IRHSPKVNLV
.: :. : ::. : ::. .: : . .: . .: .. .: ... .
NP_689 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT
210 220 230 240 250 260
300 310 320 330 340 350
pF1KE1 MYFFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEE
. : . .. . . : .:. . :. ... : : .:. . :.
NP_689 GIMHL------AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHIS--DDG
270 280 290 300 310 320
360 370 380 390 400 410
pF1KE1 LIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHW
. :.... ..: ....:.: . .:.. .::::.
NP_689 INRMVRQMHGLRTLNIGQCVRITDKGLELIAE---HLSQLTGIDLYGCTRITKRGLERIT
330 340 350 360 370
420
pF1KE1 EVSKHLGRVWFPDMMPTW
NP_689 QLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
380 390 400 410
>>XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-repea (639 aa)
initn: 186 init1: 101 opt: 169 Z-score: 200.6 bits: 46.8 E(85289): 0.00019
Smith-Waterman score: 190; 23.6% identity (52.4% similar) in 399 aa overlap (10-370:218-606)
10 20 30
pF1KE1 MKRGGRDSDRNSSEEGT-AEKSKKLRTTNEHSQTCDWGN
: ..::.. :.:.. ... :: .
XP_011 ARHKSKKKEDELILKHELQLKKWKNRLILKRAAAEESNFPERSSSEVFLVDETLKCDISL
190 200 210 220 230 240
40 50 60 70 80 90
pF1KE1 LLQDIILQVFKYLPLLDRAHASQVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPE-
: . :::.: :: : : .:: . : . .. .:: ..: : .: . :.
XP_011 LPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDF-------SSVKNVIPDK
250 260 270 280 290 300
100 110 120 130 140
pF1KE1 LIKQIIKRHSNHLQYVSFK---VDSSKESAEAACDILSQL--VNCSL---KTLGLISTAR
: . ..: .. ..:. . . . . : :..: .: ... :: .
XP_011 YIVSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGC
310 320 330 340 350 360
150 160 170 180 190 200
pF1KE1 PSFMDLPKSHF-ISALTVVFV--NSKSLSSLKIDDTP-VDDPSLKVL-VANNSDTLKLLK
:. . : :. :. :. .. . ..:..:.. : .:. : ..:. : :
XP_011 PGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLD
370 380 390 400 410 420
210 220 230 240 250
pF1KE1 MSSCPHVSPAGILCVADQCHGLRELALN-YHLLSDELLLALSSEKHVRLEHLRI------
.:.: ..: :. .:..: :. .:..: . :.:. . :: :: :. : .
XP_011 LSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALV-EKCSRITSLVFTGAPHI
430 440 450 460 470
260 270 280 290 300
pF1KE1 -DVVSENPGQTHFHTIQ----KSSWDA---FI-RHSPKVNLVMYFFLYEEEFDPFFRYEI
: . . . ... :. : :: :: .. :... . :. . : .:
XP_011 SDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHI-YMADCKGITDSSLRSLS
480 490 500 510 520 530
310 320 330 340 350 360
pF1KE1 PATHLYFGRSVSKDVLGRVGMTC----P---RLVELVVCANGLRPLDEELIRIAERCKNL
: .: .. .: .:. : :. :: . .: .: : .....::: ::
XP_011 PLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNL-SNCVRLSDASVMKLSERCPNL
540 550 560 570 580 590
370 380 390 400 410 420
pF1KE1 SAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVWF
. ..: .::
XP_011 NYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNESVKL
600 610 620 630
428 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:34:24 2016 done: Sun Nov 6 14:34:25 2016
Total Scan time: 9.030 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]