Result of FASTA (ccds) for
pFN21AE1133
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1133, 330 aa
1>>>pF1KE1133 330 - 330 aa - 330 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4778+/-0.000898; mu= 5.5605+/- 0.055
mean_var=287.2028+/-58.276, 0's: 0 Z-trim(115.9): 139 B-trim: 0 in 0/53
Lambda= 0.075680
statistics sampled from 16363 (16502) to 16363 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.795), E-opt: 0.2 (0.507), width: 16
Scan time: 3.180
The best scores are: opt bits E(32554)
CCDS4351.2 C1QTNF2 gene_id:114898|Hs108|chr5 ( 330) 2374 271.8 5.5e-73
CCDS3414.1 C1QTNF7 gene_id:114905|Hs108|chr4 ( 289) 1178 141.1 1e-33
CCDS47025.1 C1QTNF7 gene_id:114905|Hs108|chr4 ( 296) 1178 141.1 1e-33
CCDS31947.1 C1QTNF9B gene_id:387911|Hs108|chr13 ( 333) 698 88.8 6.7e-18
CCDS9306.1 C1QTNF9 gene_id:338872|Hs108|chr13 ( 333) 693 88.2 9.8e-18
CCDS46948.1 OTOL1 gene_id:131149|Hs108|chr3 ( 477) 572 75.2 1.2e-13
CCDS3284.1 ADIPOQ gene_id:9370|Hs108|chr3 ( 244) 554 72.9 3e-13
CCDS11492.1 C1QL1 gene_id:10882|Hs108|chr17 ( 258) 480 64.9 8.3e-11
>>CCDS4351.2 C1QTNF2 gene_id:114898|Hs108|chr5 (330 aa)
initn: 2374 init1: 2374 opt: 2374 Z-score: 1423.8 bits: 271.8 E(32554): 5.5e-73
Smith-Waterman score: 2374; 100.0% identity (100.0% similar) in 330 aa overlap (1-330:1-330)
10 20 30 40 50 60
pF1KE1 MGKLCLGPTLCPAAAAEESRDAEPRRELLCSGRPWTWRAAARVTTMIPWVLLACALPCAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MGKLCLGPTLCPAAAAEESRDAEPRRELLCSGRPWTWRAAARVTTMIPWVLLACALPCAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 YFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSE
250 260 270 280 290 300
310 320 330
pF1KE1 QNGLFYDPYWTDSLFTGFLIYADQDDPNEV
::::::::::::::::::::::::::::::
CCDS43 QNGLFYDPYWTDSLFTGFLIYADQDDPNEV
310 320 330
>>CCDS3414.1 C1QTNF7 gene_id:114905|Hs108|chr4 (289 aa)
initn: 1927 init1: 1178 opt: 1178 Z-score: 718.8 bits: 141.1 E(32554): 1e-33
Smith-Waterman score: 1178; 63.6% identity (80.8% similar) in 250 aa overlap (76-325:29-278)
50 60 70 80 90 100
pF1KE1 MIPWVLLACALPCAADPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRM
::. .::.:: :::::::: : : ::.
CCDS34 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRI
10 20 30 40 50
110 120 130 140 150 160
pF1KE1 GFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKH
:.::.::.::. :..:..: : :.:: : : :: : :. :: ::.: .: :
CCDS34 GLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPI
60 70 80 90 100 110
170 180 190 200 210 220
pF1KE1 GTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHY
: :: :: .:..:.::::: : ::: ::::::..: :::.::::: :.:.:.::: ::
CCDS34 GPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHY
120 130 140 150 160 170
230 240 250 260 270 280
pF1KE1 NASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILA
: ..:::.:. ::::::.::::::::::::::::::::::.::::::::::::::::..
CCDS34 NPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIY
180 190 200 210 220 230
290 300 310 320 330
pF1KE1 LKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYADQDDPNEV
:. :::::.::...::::: :: :.::::.:::.:.: :
CCDS34 LQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
240 250 260 270 280
>>CCDS47025.1 C1QTNF7 gene_id:114905|Hs108|chr4 (296 aa)
initn: 1927 init1: 1178 opt: 1178 Z-score: 718.7 bits: 141.1 E(32554): 1e-33
Smith-Waterman score: 1178; 63.6% identity (80.8% similar) in 250 aa overlap (76-325:36-285)
50 60 70 80 90 100
pF1KE1 MIPWVLLACALPCAADPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRM
::. .::.:: :::::::: : : ::.
CCDS47 PKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRI
10 20 30 40 50 60
110 120 130 140 150 160
pF1KE1 GFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKH
:.::.::.::. :..:..: : :.:: : : :: : :. :: ::.: .: :
CCDS47 GLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPI
70 80 90 100 110 120
170 180 190 200 210 220
pF1KE1 GTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHY
: :: :: .:..:.::::: : ::: ::::::..: :::.::::: :.:.:.::: ::
CCDS47 GPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHY
130 140 150 160 170 180
230 240 250 260 270 280
pF1KE1 NASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILA
: ..:::.:. ::::::.::::::::::::::::::::::.::::::::::::::::..
CCDS47 NPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIY
190 200 210 220 230 240
290 300 310 320 330
pF1KE1 LKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYADQDDPNEV
:. :::::.::...::::: :: :.::::.:::.:.: :
CCDS47 LQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
250 260 270 280 290
>>CCDS31947.1 C1QTNF9B gene_id:387911|Hs108|chr13 (333 aa)
initn: 941 init1: 357 opt: 698 Z-score: 434.8 bits: 88.8 E(32554): 6.7e-18
Smith-Waterman score: 698; 44.8% identity (66.9% similar) in 248 aa overlap (83-324:87-333)
60 70 80 90 100
pF1KE1 ACALPCAADPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGM---MGRMGFPG
. : :: : :: ::.:. ::. :. :
CCDS31 EPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 KDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPG
. : .:. :..:: : :: : :: : :: : : .: : :::: : : .: ::
CCDS31 ETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 KKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVT--KSYPRERLPIKFDKILMNEGGHYNA
.: .: ::. : : . ::::.:..: ...: .::::::::.:: .::..
CCDS31 VRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPIKFDKILYNEFNHYDT
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALK
. :::.: . :.::::: ::. .... ..::.:: ..: :: ....: :::: .: ::
CCDS31 AVGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTRDAYVSSEDQASGSIVLQLK
240 250 260 270 280 290
290 300 310 320 330
pF1KE1 QGDEVWLQIFYSEQ-NGLFYDPYWTDSLFTGFLIYADQDDPNEV
:::.:::. .:. :::: : :. :::::....:
CCDS31 LGDEMWLQVTGGERFNGLFADED-DDTTFTGFLLFSSQ
300 310 320 330
>>CCDS9306.1 C1QTNF9 gene_id:338872|Hs108|chr13 (333 aa)
initn: 935 init1: 350 opt: 693 Z-score: 431.9 bits: 88.2 E(32554): 9.8e-18
Smith-Waterman score: 693; 44.7% identity (66.7% similar) in 246 aa overlap (83-322:87-331)
60 70 80 90 100
pF1KE1 ACALPCAADPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGM---MGRMGFPG
. : :: : :: ::.:. ::. :. :
CCDS93 EPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 KDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPG
. : .:. :..:: : :: : :: : :: : : .: : :::: : : .: ::
CCDS93 ETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 KKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVT--KSYPRERLPIKFDKILMNEGGHYNA
.: .: ::. : : . ::::.:..: ...: .::::::::.:: .::..
CCDS93 VRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDT
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALK
..:::.: . :.::::: ::. .... ..::.:: ..: :: ...: :::. .: ::
CCDS93 AAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLK
240 250 260 270 280 290
290 300 310 320 330
pF1KE1 QGDEVWLQIFYSEQ-NGLFYDPYWTDSLFTGFLIYADQDDPNEV
:::::::. .:. :::: : :. :::::...
CCDS93 LGDEVWLQVTGGERFNGLFADED-DDTTFTGFLLFSSP
300 310 320 330
>>CCDS46948.1 OTOL1 gene_id:131149|Hs108|chr3 (477 aa)
initn: 984 init1: 439 opt: 572 Z-score: 358.7 bits: 75.2 E(32554): 1.2e-13
Smith-Waterman score: 572; 39.3% identity (65.2% similar) in 244 aa overlap (85-324:233-471)
60 70 80 90 100 110
pF1KE1 ALPCAADPLLGAFARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQD
: .: : : : :: : : :. :.
CCDS46 CTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGGMK
210 220 230 240 250 260
120 130 140 150 160 170
pF1KE1 GHDGDRGDSGEEGPPGRTG---NRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKK
:. :..:::: :: ::.: .: :: ::. : .: : :: : .: :..:. .
CCDS46 GEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDIGNKGV---R
270 280 290 300 310
180 190 200 210 220 230
pF1KE1 GPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGK
:: :::: :. : . . .::::....: .: .::::.:::.:. :.:. .::
CCDS46 GPTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPIKFEKILYNDQGNYSPVTGK
320 330 340 350 360 370
240 250 260 270 280 290
pF1KE1 FVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGNH-DVASGSTILALKQGD
: :..:: : :.: ::. .. :.:: ... .... .. :.. : :: .:: :. ::
CCDS46 FNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQASLLVILKLSAGD
380 390 400 410 420 430
300 310 320 330
pF1KE1 EVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYADQDDPNEV
.:::.. .. ::.. . ::.:::::.: ..
CCDS46 QVWLEV-SKDWNGVYVSAE-DDSIFTGFLLYPEETSGISP
440 450 460 470
>>CCDS3284.1 ADIPOQ gene_id:9370|Hs108|chr3 (244 aa)
initn: 954 init1: 342 opt: 554 Z-score: 351.4 bits: 72.9 E(32554): 3e-13
Smith-Waterman score: 569; 40.3% identity (60.8% similar) in 263 aa overlap (75-325:5-244)
50 60 70 80 90
pF1KE1 TMIPWVLLACALPCAADPLLGAFARRDFRKGSPQLVCSLPG------PQGP----PGPPG
:. :. .::: ::: : : :
CCDS32 MLLLGAVLLLLALPGHDQETTTQGPGVLLPLPKG
10 20 30
100 110 120 130 140 150
pF1KE1 APGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRG
: .: :. :.:: . ::.: ::: : : :: ::. : : ::.:
CCDS32 A--CTGWMA--GIPG---HPGHNG---------APGRDGRDGTPGEKGEKGDPGLIGPKG
40 50 60 70
160 170 180 190 200 210
pF1KE1 PKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKF
: .:.:: .: : : .:.::::: :. .:::::.. .::.:
CCDS32 DIGETGVPGAEGPRGFPGIQGRKGEPGE------GAYVYRSAFSVGLETYVTIPNMPIRF
80 90 100 110 120 130
220 230 240 250 260 270
pF1KE1 DKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIRTFDANTGN
::..:. .::..:.::: :..::.:::.: ::. : . ..: .. . . :.: :
CCDS32 TKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQEN
140 150 160 170 180 190
280 290 300 310 320 330
pF1KE1 H-DVASGSTILALKQGDEVWLQIF-YSEQNGLFYDPYWTDSLFTGFLIYADQDDPNEV
. : ::::..: :. ::.::::.. .:.:::. : .:: :::::.: : .
CCDS32 NVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADND-NDSTFTGFLLYHDTN
200 210 220 230 240
>>CCDS11492.1 C1QL1 gene_id:10882|Hs108|chr17 (258 aa)
initn: 471 init1: 284 opt: 480 Z-score: 307.5 bits: 64.9 E(32554): 8.3e-11
Smith-Waterman score: 483; 38.2% identity (57.8% similar) in 249 aa overlap (97-323:17-258)
70 80 90 100 110
pF1KE1 FARRDFRKGSPQLVCSLPGPQGPPGPPGAPGPSG---MMG--RM---GFPGKDGQDGHDG
:: : :.: :: .:.. :
CCDS11 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGART
10 20 30 40
120 130 140 150 160 170
pF1KE1 DRGDSGEE---GPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKG
: ::. : .:: : . ::.:: : :. :: :: : : :: : ::.:: :
CCDS11 DGGDALSEQSGAPPPSTLVQ---GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPG
50 60 70 80 90 100
180 190 200 210 220
pF1KE1 KKGEPGLPGPCSCGSGHTKSAFSVAVTKSY-----PRERLPI-KFDKILMNEGGHYNASS
: : ::::: . :. : . .: . : :.: . ::: .. : :..:.:.:
CCDS11 KPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAAS
110 120 130 140 150 160
230 240 250 260 270 280
pF1KE1 GKFVCGVPGIYYFTYDITLAN---KHLAIGLVHNGQYRIRTF--DANTGNHDVASGSTIL
:::.:..:: :.::: . . . . : .::: : .. ::. :.: ::.:.::
CCDS11 GKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQ-NYDYASNSVIL
170 180 190 200 210 220
290 300 310 320 330
pF1KE1 ALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYADQDDPNEV
: ::::.... .. .: . : : :.::.::.:
CCDS11 HLDAGDEVFIKLDGGKAHGGNSNKY---STFSGFIIYSD
230 240 250
330 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:06:00 2016 done: Sun Nov 6 22:06:01 2016
Total Scan time: 3.180 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]