Result of FASTA (ccds) for
pFN21AE1127
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1127, 118 aa
1>>>pF1KE1127 118 - 118 aa - 118 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0105+/-0.000523; mu= 11.7272+/- 0.032
mean_var=56.0742+/-11.369, 0's: 0 Z-trim(112.6): 11 B-trim: 21 in 1/51
Lambda= 0.171274
statistics sampled from 13360 (13370) to 13360 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.797), E-opt: 0.2 (0.411), width: 16
Scan time: 1.760
The best scores are: opt bits E(32554)
CCDS5897.1 ZNF746 gene_id:155061|Hs108|chr7 ( 644) 671 173.2 1.8e-43
CCDS55180.1 ZNF746 gene_id:155061|Hs108|chr7 ( 645) 671 173.2 1.8e-43
CCDS56519.1 ZNF783 gene_id:100289678|Hs108|chr7 ( 546) 611 158.4 4.5e-39
CCDS78284.1 ZNF282 gene_id:8427|Hs108|chr7 ( 463) 600 155.6 2.5e-38
CCDS5895.1 ZNF282 gene_id:8427|Hs108|chr7 ( 671) 600 155.7 3.5e-38
CCDS5896.1 ZNF212 gene_id:7988|Hs108|chr7 ( 495) 576 149.7 1.6e-36
CCDS5894.1 ZNF398 gene_id:57541|Hs108|chr7 ( 642) 563 146.5 1.9e-35
CCDS43675.1 ZNF777 gene_id:27153|Hs108|chr7 ( 831) 557 145.1 6.6e-35
>>CCDS5897.1 ZNF746 gene_id:155061|Hs108|chr7 (644 aa)
initn: 671 init1: 671 opt: 671 Z-score: 894.1 bits: 173.2 E(32554): 1.8e-43
Smith-Waterman score: 671; 95.4% identity (99.1% similar) in 108 aa overlap (1-108:1-108)
10 20 30 40 50 60
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLEGQTGMAEKKLADCEKTAVEFGNQL
: ::.:::::::::::::::::::::::::.::::::.::::::::::::::::::::::
CCDS58 MAEAVAAPISPWTMAATIQAMERKIESQAARLLSLEGRTGMAEKKLADCEKTAVEFGNQL
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 EGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWILRLPPGSKGESPKVPMTFDDVAV
::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS58 EGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRLPPGSKGESPKEWGKLEDWQKEL
70 80 90 100 110 120
CCDS58 YKHVMRGNYETLVSLDYAISKPEVLSQIEQGKEPCNWRRPGPKIPDVPVDPSPGSGPPVP
130 140 150 160 170 180
>>CCDS55180.1 ZNF746 gene_id:155061|Hs108|chr7 (645 aa)
initn: 671 init1: 671 opt: 671 Z-score: 894.1 bits: 173.2 E(32554): 1.8e-43
Smith-Waterman score: 671; 95.4% identity (99.1% similar) in 108 aa overlap (1-108:1-108)
10 20 30 40 50 60
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLEGQTGMAEKKLADCEKTAVEFGNQL
: ::.:::::::::::::::::::::::::.::::::.::::::::::::::::::::::
CCDS55 MAEAVAAPISPWTMAATIQAMERKIESQAARLLSLEGRTGMAEKKLADCEKTAVEFGNQL
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 EGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWILRLPPGSKGESPKVPMTFDDVAV
::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS55 EGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRLPPGSKGESPKEWGKLEDWQKEL
70 80 90 100 110 120
CCDS55 YKHVMRGNYETLVSLDYAISKPEVLSQIEQGKEPCNWRRPGPKIPDVPVDPSPGSGPPVP
130 140 150 160 170 180
>>CCDS56519.1 ZNF783 gene_id:100289678|Hs108|chr7 (546 aa)
initn: 611 init1: 611 opt: 611 Z-score: 815.0 bits: 158.4 E(32554): 4.5e-39
Smith-Waterman score: 611; 82.7% identity (96.4% similar) in 110 aa overlap (9-118:41-150)
10 20 30
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLEGQ
:. ::..:.:::.:.:..: ..::.:::.
CCDS56 ETDKHTEDQSPSTPLPQPAAEKNSYLYSTEITLWTVVAAIQALEKKVDSCLTRLLTLEGR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE1 TGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWILRL
:: :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS56 TGTAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRL
80 90 100 110 120 130
100 110
pF1KE1 PPGSKGESPKVPMTFDDVAV
:::::::.::::.:::::::
CCDS56 PPGSKGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPD
140 150 160 170 180 190
>>CCDS78284.1 ZNF282 gene_id:8427|Hs108|chr7 (463 aa)
initn: 600 init1: 600 opt: 600 Z-score: 801.5 bits: 155.6 E(32554): 2.5e-38
Smith-Waterman score: 600; 78.6% identity (96.4% similar) in 112 aa overlap (7-118:94-205)
10 20 30
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLE
: :: ::..:.:::.:::...::..::.::
CCDS78 RRPMPFQFPPFPDRAPVFPDRMMREPQLPTAEISLWTVVAAIQAVERKVDAQASQLLNLE
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE1 GQTGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWIL
:.:: :::::::::::::::::..:.:::::::::::::::::::::.::::.:::::.:
CCDS78 GRTGTAEKKLADCEKTAVEFGNHMESKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWVL
130 140 150 160 170 180
100 110
pF1KE1 RLPPGSKGESPKVPMTFDDVAV
:::::::::.::::.:: :.::
CCDS78 RLPPGSKGEAPKVPVTFVDIAVYFSEDEWKNLDEWQKELYNNLVKENYKTLMSLDAEGSV
190 200 210 220 230 240
>>CCDS5895.1 ZNF282 gene_id:8427|Hs108|chr7 (671 aa)
initn: 600 init1: 600 opt: 600 Z-score: 799.0 bits: 155.7 E(32554): 3.5e-38
Smith-Waterman score: 600; 78.6% identity (96.4% similar) in 112 aa overlap (7-118:94-205)
10 20 30
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLE
: :: ::..:.:::.:::...::..::.::
CCDS58 RRPMPFQFPPFPDRAPVFPDRMMREPQLPTAEISLWTVVAAIQAVERKVDAQASQLLNLE
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE1 GQTGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWIL
:.:: :::::::::::::::::..:.:::::::::::::::::::::.::::.:::::.:
CCDS58 GRTGTAEKKLADCEKTAVEFGNHMESKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWVL
130 140 150 160 170 180
100 110
pF1KE1 RLPPGSKGESPKVPMTFDDVAV
:::::::::.::::.:: :.::
CCDS58 RLPPGSKGEAPKVPVTFVDIAVYFSEDEWKNLDEWQKELYNNLVKENYKTLMSLDAEGSV
190 200 210 220 230 240
>>CCDS5896.1 ZNF212 gene_id:7988|Hs108|chr7 (495 aa)
initn: 576 init1: 576 opt: 576 Z-score: 769.0 bits: 149.7 E(32554): 1.6e-36
Smith-Waterman score: 576; 80.0% identity (93.6% similar) in 110 aa overlap (9-118:39-148)
10 20 30
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLEGQ
:: ::..:.:::.:.:.:::::.: ::::.
CCDS58 HRRKRRSTPLTSSTLPSQATEKSSYFQTTEISLWTVVAAIQAVEKKMESQAARLQSLEGR
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 TGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWILRL
:: :::::::::: ::::::::::::::::::::::::::::::::::::.:::::::::
CCDS58 TGTAEKKLADCEKMAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRL
70 80 90 100 110 120
100 110
pF1KE1 PPGSKGESPKVPMTFDDVAV
:::::::.::: .... .:
CCDS58 PPGSKGEAPKVSRSLENDGVCFTEQEWENLEDWQKELYRNVMESNYETLVSLKVLGQTEG
130 140 150 160 170 180
>>CCDS5894.1 ZNF398 gene_id:57541|Hs108|chr7 (642 aa)
initn: 593 init1: 559 opt: 563 Z-score: 749.9 bits: 146.5 E(32554): 1.9e-35
Smith-Waterman score: 563; 74.1% identity (92.9% similar) in 112 aa overlap (7-118:39-150)
10 20 30
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLE
: :: ::..:..::.:::.: .. .:: ::
CCDS58 TSEWDSECLTSLQPLPLPTPPAANEAHLQTAAISLWTVVAAVQAIERKVEIHSRRLLHLE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 GQTGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWIL
:.:: ::::::.::::..:.:::::::::::::::::::::::::::.::::.:::::::
CCDS58 GRTGTAEKKLASCEKTVTELGNQLEGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWIL
70 80 90 100 110 120
100 110
pF1KE1 RLPPGSKGESPKVPMTFDDVAV
::::: ::. ::::..::::..
CCDS58 RLPPGIKGDIPKVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQ
130 140 150 160 170 180
>>CCDS43675.1 ZNF777 gene_id:27153|Hs108|chr7 (831 aa)
initn: 553 init1: 553 opt: 557 Z-score: 740.1 bits: 145.1 E(32554): 6.6e-35
Smith-Waterman score: 557; 75.0% identity (92.9% similar) in 112 aa overlap (7-118:181-292)
10 20 30
pF1KE1 MEEAAAAPISPWTMAATIQAMERKIESQAAHLLSLE
: :. .. :..::.:::.:.:: .::.::
CCDS43 MDPLLQSPVSQKDTPFQISSAVQKEQPLPTAEITRLAVWAAVQAVERKLEAQAMRLLTLE
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE1 GQTGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLHNRNFWIL
:.:: :::.::::::::::.:.::.::.::::::::::::::::::.::::.:::::::
CCDS43 GRTGTNEKKIADCEKTAVEFANHLESKWVVLGTLLQEYGLLQRRLENMENLLKNRNFWIL
220 230 240 250 260 270
100 110
pF1KE1 RLPPGSKGESPKVPMTFDDVAV
::::::.:: ::::.:::::::
CCDS43 RLPPGSNGEVPKVPVTFDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISK
280 290 300 310 320 330
118 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:07:51 2016 done: Sun Nov 6 22:07:52 2016
Total Scan time: 1.760 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]