Result of FASTA (omim) for
pFN21AE1108
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1108, 103 aa
1>>>pF1KE1108 103 - 103 aa - 103 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0768+/-0.000261; mu= 6.7517+/- 0.017
mean_var=81.3410+/-16.008, 0's: 0 Z-trim(121.2): 12 B-trim: 0 in 0/51
Lambda= 0.142207
statistics sampled from 37556 (37568) to 37556 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.795), E-opt: 0.2 (0.44), width: 16
Scan time: 4.680
The best scores are: opt bits E(85289)
NP_115850 (OMIM: 300669) sperm protein associated ( 103) 668 145.3 1.7e-35
XP_016855456 (OMIM: 300330) PREDICTED: sperm prote ( 97) 518 114.5 2.9e-26
XP_016855457 (OMIM: 300493) PREDICTED: sperm prote ( 97) 512 113.3 6.9e-26
NP_663695 (OMIM: 300493) sperm protein associated ( 97) 507 112.2 1.4e-25
NP_038481 (OMIM: 300305) sperm protein associated ( 97) 507 112.2 1.4e-25
NP_073152 (OMIM: 300330) sperm protein associated ( 97) 488 108.3 2.1e-24
NP_115793 (OMIM: 300670,300671) sperm protein asso ( 97) 477 106.1 1e-23
NP_001009615 (OMIM: 300665) sperm protein associat ( 180) 186 46.5 1.6e-05
NP_001009614 (OMIM: 300664) sperm protein associat ( 72) 179 44.9 2e-05
NP_001009609 (OMIM: 300666) sperm protein associat ( 141) 172 43.6 9.5e-05
NP_001009616 (OMIM: 300668) sperm protein associat ( 72) 158 40.6 0.00039
>>NP_115850 (OMIM: 300669) sperm protein associated with (103 aa)
initn: 668 init1: 668 opt: 668 Z-score: 758.3 bits: 145.3 E(85289): 1.7e-35
Smith-Waterman score: 668; 99.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
10 20 30 40 50 60
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
:::::::::::::.:::::::::::::::::::::::::::::
NP_115 YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK
70 80 90 100
>>XP_016855456 (OMIM: 300330) PREDICTED: sperm protein a (97 aa)
initn: 551 init1: 458 opt: 518 Z-score: 592.4 bits: 114.5 E(85289): 2.9e-26
Smith-Waterman score: 518; 80.6% identity (87.4% similar) in 103 aa overlap (1-103:1-97)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::::::.:: :::::::::::::::::::::::::::::::
XP_016 MDKQSSAGGVKRSVPCESNEVNE------TMPETPTGDSDPQPAPKKMKTSESSTILVVR
10 20 30 40 50
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
:::::::::::::.::::::::::: :::::::.:: .: : :
XP_016 YRRNVKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>XP_016855457 (OMIM: 300493) PREDICTED: sperm protein a (97 aa)
initn: 545 init1: 452 opt: 512 Z-score: 585.8 bits: 113.3 E(85289): 6.9e-26
Smith-Waterman score: 512; 79.6% identity (86.4% similar) in 103 aa overlap (1-103:1-97)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::::::.:: :::::::::::::::::::::::::::::::
XP_016 MDKQSSAGGVKRSVPCESNEVNE------TMPETPTGDSDPQPAPKKMKTSESSTILVVR
10 20 30 40 50
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
:::: ::::::::.::::::::::: :::::::.:: .: : :
XP_016 YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>NP_663695 (OMIM: 300493) sperm protein associated with (97 aa)
initn: 544 init1: 451 opt: 507 Z-score: 580.2 bits: 112.2 E(85289): 1.4e-25
Smith-Waterman score: 507; 78.6% identity (85.4% similar) in 103 aa overlap (1-103:1-97)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::.:::::: ::::::::::::::::::::::::::::::
NP_663 MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR
10 20 30 40 50
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
:::: ::::::::.::::::::::: :::::::.:: .: : :
NP_663 YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>NP_038481 (OMIM: 300305) sperm protein associated with (97 aa)
initn: 544 init1: 451 opt: 507 Z-score: 580.2 bits: 112.2 E(85289): 1.4e-25
Smith-Waterman score: 507; 78.6% identity (85.4% similar) in 103 aa overlap (1-103:1-97)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::.:::::: ::::::::::::::::::::::::::::::
NP_038 MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR
10 20 30 40 50
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
:::: ::::::::.::::::::::: :::::::.:: .: : :
NP_038 YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>NP_073152 (OMIM: 300330) sperm protein associated with (97 aa)
initn: 530 init1: 432 opt: 488 Z-score: 559.2 bits: 108.3 E(85289): 2.1e-24
Smith-Waterman score: 488; 76.7% identity (84.5% similar) in 103 aa overlap (1-103:1-97)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::.:::::: :::: .: :::::::::.::::::::::::
NP_073 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR
10 20 30 40 50
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
::::::::::::::::::::::::: :::::::.:: .: : :
NP_073 YRRNVKRTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>NP_115793 (OMIM: 300670,300671) sperm protein associat (97 aa)
initn: 519 init1: 421 opt: 477 Z-score: 547.0 bits: 106.1 E(85289): 1e-23
Smith-Waterman score: 477; 74.8% identity (83.5% similar) in 103 aa overlap (1-103:1-97)
10 20 30 40 50 60
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::.:::::: :::: .: :::::::::.::::::::::::
NP_115 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR
10 20 30 40 50
70 80 90 100
pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
:::: ::::::::::::::.::::: :::::::.:: .: : :
NP_115 YRRNFKRTSPEELVNDHARKNRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>NP_001009615 (OMIM: 300665) sperm protein associated w (180 aa)
initn: 139 init1: 62 opt: 186 Z-score: 220.2 bits: 46.5 E(85289): 1.6e-05
Smith-Waterman score: 186; 43.2% identity (64.8% similar) in 88 aa overlap (5-92:6-87)
10 20 30 40 50
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVV
::. ::. ::::: :. : : :.:. :. . .: :: : ::.:
NP_001 MEQPTSSTNGEKRKSPCESN-----NKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVY
10 20 30 40 50
60 70 80 90 100
pF1KE1 RYRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
::...: .: ..: .:..::: ::: : ::.:
NP_001 YYRKHTKINS-NQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDED
60 70 80 90 100 110
NP_001 LDSSEGSSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSS
120 130 140 150 160 170
>>NP_001009614 (OMIM: 300664) sperm protein associated w (72 aa)
initn: 175 init1: 113 opt: 179 Z-score: 218.6 bits: 44.9 E(85289): 2e-05
Smith-Waterman score: 179; 47.3% identity (67.6% similar) in 74 aa overlap (5-78:6-72)
10 20 30 40 50
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVV
::. ::. ::::: :: .: : :::. : :.:. ::::::: ::.:.
NP_001 MEQPTSSINGEKRKSPCESN--NENDE----MQETPNRDLAPEPSLKKMKTSEYSTVLAF
10 20 30 40 50
60 70 80 90 100
pF1KE1 RYRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
::. .:. ..: ::..
NP_001 CYRK-AKKIHSNQLENDQS
60 70
>>NP_001009609 (OMIM: 300666) sperm protein associated w (141 aa)
initn: 120 init1: 61 opt: 172 Z-score: 206.3 bits: 43.6 E(85289): 9.5e-05
Smith-Waterman score: 172; 37.6% identity (62.4% similar) in 93 aa overlap (5-97:6-92)
10 20 30 40 50
pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVV
::. : . ::::: :. : : :.:. :. . :. :::: :. :
NP_001 MEQPTSSTNGEKTKSPCESN-----NKKNDEMQEVPNRVLAPEQSLKNTKTSEYP-IIFV
10 20 30 40 50
60 70 80 90 100
pF1KE1 RYRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK
: :. :. . ..: :....:: ::: : ::.: ....
NP_001 YYLRKGKKINSNQLENEQSQENSINPIQKEEDEGVDLSEGSSNEDEDLGPCEGPSKEDKD
60 70 80 90 100 110
NP_001 LDSSEGSSQEDEDLGLSEGSSQDSGED
120 130 140
103 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:19:01 2016 done: Sun Nov 6 22:19:02 2016
Total Scan time: 4.680 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]