Result of FASTA (omim) for
pFN21AE1107
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1107, 97 aa
1>>>pF1KE1107 97 - 97 aa - 97 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9998+/-0.000254; mu= 6.3944+/- 0.016
mean_var=75.8959+/-15.200, 0's: 0 Z-trim(121.7): 12 B-trim: 0 in 0/54
Lambda= 0.147219
statistics sampled from 38587 (38599) to 38587 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.453), width: 16
Scan time: 4.610
The best scores are: opt bits E(85289)
NP_663695 (OMIM: 300493) sperm protein associated ( 97) 642 144.3 2.8e-35
NP_038481 (OMIM: 300305) sperm protein associated ( 97) 642 144.3 2.8e-35
XP_016855457 (OMIM: 300493) PREDICTED: sperm prote ( 97) 623 140.3 4.6e-34
XP_016855456 (OMIM: 300330) PREDICTED: sperm prote ( 97) 614 138.4 1.7e-33
NP_115793 (OMIM: 300670,300671) sperm protein asso ( 97) 604 136.3 7.6e-33
NP_073152 (OMIM: 300330) sperm protein associated ( 97) 600 135.4 1.4e-32
NP_115850 (OMIM: 300669) sperm protein associated ( 103) 511 116.5 7.1e-27
NP_001009614 (OMIM: 300664) sperm protein associat ( 72) 199 50.2 4.6e-07
NP_001009616 (OMIM: 300668) sperm protein associat ( 72) 199 50.2 4.6e-07
NP_001009615 (OMIM: 300665) sperm protein associat ( 180) 201 50.8 7.7e-07
NP_001009609 (OMIM: 300666) sperm protein associat ( 141) 184 47.1 7.6e-06
>>NP_663695 (OMIM: 300493) sperm protein associated with (97 aa)
initn: 642 init1: 642 opt: 642 Z-score: 754.3 bits: 144.3 E(85289): 2.8e-35
Smith-Waterman score: 642; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97)
10 20 30 40 50 60
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_663 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
10 20 30 40 50 60
70 80 90
pF1KE1 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::::::::::::::::::::::::::::::::::::
NP_663 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
70 80 90
>>NP_038481 (OMIM: 300305) sperm protein associated with (97 aa)
initn: 642 init1: 642 opt: 642 Z-score: 754.3 bits: 144.3 E(85289): 2.8e-35
Smith-Waterman score: 642; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97)
10 20 30 40 50 60
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_038 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
10 20 30 40 50 60
70 80 90
pF1KE1 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::::::::::::::::::::::::::::::::::::
NP_038 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
70 80 90
>>XP_016855457 (OMIM: 300493) PREDICTED: sperm protein a (97 aa)
initn: 623 init1: 623 opt: 623 Z-score: 732.5 bits: 140.3 E(85289): 4.6e-34
Smith-Waterman score: 623; 96.9% identity (99.0% similar) in 97 aa overlap (1-97:1-97)
10 20 30 40 50 60
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
::::::::::::::::.:::.:: ::::::::::::::::::::::::::::::::::::
XP_016 MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
10 20 30 40 50 60
70 80 90
pF1KE1 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::::::::::::::::::::::::::::::::::::
XP_016 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
70 80 90
>>XP_016855456 (OMIM: 300330) PREDICTED: sperm protein a (97 aa)
initn: 614 init1: 614 opt: 614 Z-score: 722.1 bits: 138.4 E(85289): 1.7e-33
Smith-Waterman score: 614; 95.9% identity (97.9% similar) in 97 aa overlap (1-97:1-97)
10 20 30 40 50 60
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
::::::::::::::::.:::.:: :::::::::::::::::::::::::::::::::: :
XP_016 MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK
10 20 30 40 50 60
70 80 90
pF1KE1 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::::::::::::::::::::::::::::::::::::
XP_016 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
70 80 90
>>NP_115793 (OMIM: 300670,300671) sperm protein associat (97 aa)
initn: 604 init1: 604 opt: 604 Z-score: 710.6 bits: 136.3 E(85289): 7.6e-33
Smith-Waterman score: 604; 93.8% identity (97.9% similar) in 97 aa overlap (1-97:1-97)
10 20 30 40 50 60
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
:::::::::::::::::::::::::::: .: :::::::::.::::::::::::::::::
NP_115 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNFK
10 20 30 40 50 60
70 80 90
pF1KE1 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::::::.:::::.:::::::::::::::::::::::
NP_115 RTSPEELVNDHARKNRINPLQMEEEEFMEIMVEIPAK
70 80 90
>>NP_073152 (OMIM: 300330) sperm protein associated with (97 aa)
initn: 600 init1: 600 opt: 600 Z-score: 706.1 bits: 135.4 E(85289): 1.4e-32
Smith-Waterman score: 600; 93.8% identity (96.9% similar) in 97 aa overlap (1-97:1-97)
10 20 30 40 50 60
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK
:::::::::::::::::::::::::::: .: :::::::::.:::::::::::::::: :
NP_073 MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK
10 20 30 40 50 60
70 80 90
pF1KE1 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::::::.:::::::::::::::::::::::::::::
NP_073 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK
70 80 90
>>NP_115850 (OMIM: 300669) sperm protein associated with (103 aa)
initn: 548 init1: 455 opt: 511 Z-score: 603.5 bits: 116.5 E(85289): 7.1e-27
Smith-Waterman score: 511; 79.6% identity (85.4% similar) in 103 aa overlap (1-97:1-103)
10 20 30 40 50
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR
: .:::. .::::::.:::::: ::::::::::::::::::::::::::::::
NP_115 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
10 20 30 40 50 60
60 70 80 90
pF1KE1 YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:::: :::::::::::::::::::: :::::::.:: .: : :
NP_115 YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK
70 80 90 100
>>NP_001009614 (OMIM: 300664) sperm protein associated w (72 aa)
initn: 199 init1: 185 opt: 199 Z-score: 247.8 bits: 50.2 E(85289): 4.6e-07
Smith-Waterman score: 199; 48.5% identity (72.1% similar) in 68 aa overlap (5-72:6-72)
10 20 30 40 50
pF1KE1 MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNF
:: .: ::. ::.::. :. : :::. : :.:. ::::::: ::.:. ::.
NP_001 MEQPTSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKA-
10 20 30 40 50
60 70 80 90
pF1KE1 KRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:. ..: ::..
NP_001 KKIHSNQLENDQS
60 70
>>NP_001009616 (OMIM: 300668) sperm protein associated w (72 aa)
initn: 190 init1: 184 opt: 199 Z-score: 247.8 bits: 50.2 E(85289): 4.6e-07
Smith-Waterman score: 199; 49.3% identity (72.6% similar) in 73 aa overlap (1-72:1-72)
10 20 30 40 50
pF1KE1 MDKQ-SSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNF
:.: ::..: ::. ::::: :. : :::. : .:. ::::::: ::.::. ::..
NP_001 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-
10 20 30 40 50
60 70 80 90
pF1KE1 KRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
:. ..: ::..
NP_001 KKIHSNQLENDQS
60 70
>>NP_001009615 (OMIM: 300665) sperm protein associated w (180 aa)
initn: 167 init1: 133 opt: 201 Z-score: 243.8 bits: 50.8 E(85289): 7.7e-07
Smith-Waterman score: 201; 43.0% identity (70.9% similar) in 86 aa overlap (5-89:6-90)
10 20 30 40 50
pF1KE1 MDKQSSAGGVKRSVPCDSN-EANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN
::..: ::. ::.:: . :. : :.:. :. . .: :: : ::.: ::..
NP_001 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
10 20 30 40 50 60
60 70 80 90
pF1KE1 FKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
: .: ..: .:..::: :::.: ::.: ..
NP_001 TKINS-NQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSE
70 80 90 100 110
NP_001 GSSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGE
120 130 140 150 160 170
97 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:49:48 2016 done: Sun Nov 6 10:49:48 2016
Total Scan time: 4.610 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]