FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1102, 76 aa
  1>>>pF1KE1102 76 - 76 aa - 76 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1047+/-0.000481; mu= 10.3973+/- 0.029
 mean_var=75.8786+/-14.873, 0's: 0 Z-trim(117.0): 3  B-trim: 51 in 1/52
 Lambda= 0.147236
 statistics sampled from 17663 (17666) to 17663 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.874), E-opt: 0.2 (0.543), width:  16
 Scan time:  1.420

The best scores are:                                      opt bits E(32554)
CCDS6291.1 ZNF706 gene_id:51123|Hs108|chr8         (  76)  517 117.1   1e-27


>>CCDS6291.1 ZNF706 gene_id:51123|Hs108|chr8              (76 aa)
 initn: 517 init1: 517 opt: 517  Z-score: 611.0  bits: 117.1 E(32554): 1e-27
Smith-Waterman score: 517; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)

               10        20        30        40        50        60
pF1KE1 MARGQQKIQSQQKNAKKQAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MARGQQKIQSQQKNAKKQAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFES
               10        20        30        40        50        60

               70      
pF1KE1 KHPKTPLPPELADVQA
       ::::::::::::::::
CCDS62 KHPKTPLPPELADVQA
               70      




76 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 20:19:51 2016 done: Sun Nov  6 20:19:51 2016
 Total Scan time:  1.420 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]