Result of FASTA (ccds) for
pFN21AE0933
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0933, 415 aa
1>>>pF1KE0933 415 - 415 aa - 415 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1568+/-0.00101; mu= 13.4879+/- 0.061
mean_var=88.8784+/-17.338, 0's: 0 Z-trim(105.2): 109 B-trim: 0 in 0/50
Lambda= 0.136043
statistics sampled from 8194 (8307) to 8194 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.255), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS11865.1 PTPN2 gene_id:5771|Hs108|chr18 ( 415) 2808 561.4 5.7e-160
CCDS11863.1 PTPN2 gene_id:5771|Hs108|chr18 ( 387) 2566 513.9 1.1e-145
CCDS77155.1 PTPN2 gene_id:5771|Hs108|chr18 ( 386) 2426 486.4 2e-137
CCDS11864.1 PTPN2 gene_id:5771|Hs108|chr18 ( 353) 2349 471.3 6.5e-133
CCDS13430.1 PTPN1 gene_id:5770|Hs108|chr20 ( 435) 1493 303.3 2.9e-82
CCDS59306.1 PTPN2 gene_id:5771|Hs108|chr18 ( 410) 1443 293.5 2.5e-79
CCDS63309.1 PTPN1 gene_id:5770|Hs108|chr20 ( 362) 1179 241.6 8.9e-64
CCDS55846.1 PTPRB gene_id:5787|Hs108|chr12 (1907) 673 142.7 2.8e-33
CCDS55845.1 PTPRB gene_id:5787|Hs108|chr12 (1907) 673 142.7 2.8e-33
CCDS44944.1 PTPRB gene_id:5787|Hs108|chr12 (1997) 673 142.7 2.9e-33
CCDS81713.1 PTPRB gene_id:5787|Hs108|chr12 (2127) 673 142.7 3.1e-33
CCDS44943.1 PTPRB gene_id:5787|Hs108|chr12 (2215) 673 142.7 3.2e-33
CCDS48000.1 PTPN3 gene_id:5774|Hs108|chr9 ( 737) 653 138.6 1.9e-32
CCDS48001.1 PTPN3 gene_id:5774|Hs108|chr9 ( 782) 653 138.6 2e-32
CCDS6776.1 PTPN3 gene_id:5774|Hs108|chr9 ( 913) 653 138.6 2.3e-32
CCDS7945.1 PTPRJ gene_id:5795|Hs108|chr11 (1337) 647 137.5 7.2e-32
CCDS490.2 PTPRF gene_id:5792|Hs108|chr1 (1898) 639 136.0 2.9e-31
CCDS489.2 PTPRF gene_id:5792|Hs108|chr1 (1907) 639 136.0 2.9e-31
CCDS11840.1 PTPRM gene_id:5797|Hs108|chr18 (1452) 630 134.2 7.8e-31
CCDS58613.1 PTPRM gene_id:5797|Hs108|chr18 (1465) 630 134.2 7.9e-31
CCDS53754.1 PTPRO gene_id:5800|Hs108|chr12 ( 377) 615 130.9 1.9e-30
CCDS44837.1 PTPRO gene_id:5800|Hs108|chr12 ( 405) 615 131.0 2.1e-30
CCDS2129.1 PTPN4 gene_id:5775|Hs108|chr2 ( 926) 619 131.9 2.4e-30
CCDS8674.1 PTPRO gene_id:5800|Hs108|chr12 (1188) 615 131.2 5.1e-30
CCDS8675.1 PTPRO gene_id:5800|Hs108|chr12 (1216) 615 131.2 5.2e-30
CCDS75517.1 PTPRK gene_id:5796|Hs108|chr6 (1439) 613 130.9 7.8e-30
CCDS5137.1 PTPRK gene_id:5796|Hs108|chr6 (1440) 613 130.9 7.8e-30
CCDS42874.1 PTPRT gene_id:11122|Hs108|chr20 (1441) 608 129.9 1.5e-29
CCDS68127.1 PTPRT gene_id:11122|Hs108|chr20 (1460) 608 129.9 1.6e-29
CCDS7658.1 PTPRE gene_id:5791|Hs108|chr10 ( 642) 596 127.3 4e-29
CCDS7657.1 PTPRE gene_id:5791|Hs108|chr10 ( 700) 596 127.4 4.3e-29
CCDS2895.1 PTPRG gene_id:5793|Hs108|chr3 (1445) 593 126.9 1.2e-28
CCDS47096.1 PTPN13 gene_id:5783|Hs108|chr4 (2294) 589 126.3 3e-28
CCDS47095.1 PTPN13 gene_id:5783|Hs108|chr4 (2466) 589 126.3 3.2e-28
CCDS47094.1 PTPN13 gene_id:5783|Hs108|chr4 (2485) 589 126.3 3.2e-28
CCDS47093.1 PTPN13 gene_id:5783|Hs108|chr4 (2490) 589 126.3 3.2e-28
CCDS73114.1 PTPN20 gene_id:26095|Hs108|chr10 ( 339) 569 121.9 9.3e-28
CCDS73105.1 PTPN20 gene_id:26095|Hs108|chr10 ( 411) 569 121.9 1.1e-27
CCDS73110.1 PTPN20 gene_id:26095|Hs108|chr10 ( 420) 569 121.9 1.1e-27
CCDS1398.2 PTPRC gene_id:5788|Hs108|chr1 (1145) 575 123.4 1.1e-27
CCDS34740.1 PTPRZ1 gene_id:5803|Hs108|chr7 (2315) 579 124.3 1.2e-27
CCDS1397.2 PTPRC gene_id:5788|Hs108|chr1 (1306) 575 123.4 1.3e-27
CCDS56505.1 PTPRZ1 gene_id:5803|Hs108|chr7 (1448) 574 123.2 1.6e-27
CCDS54321.1 PTPRH gene_id:5794|Hs108|chr19 ( 937) 570 122.3 1.9e-27
CCDS33110.1 PTPRH gene_id:5794|Hs108|chr19 (1115) 570 122.4 2.2e-27
CCDS78294.1 PTPRN2 gene_id:5799|Hs108|chr7 ( 977) 559 120.2 8.8e-27
CCDS5949.1 PTPRN2 gene_id:5799|Hs108|chr7 ( 986) 559 120.2 8.8e-27
CCDS5948.1 PTPRN2 gene_id:5799|Hs108|chr7 ( 998) 559 120.2 8.9e-27
CCDS5947.1 PTPRN2 gene_id:5799|Hs108|chr7 (1015) 559 120.2 9e-27
CCDS75813.1 PTPRD gene_id:5789|Hs108|chr9 (1496) 561 120.7 9.5e-27
>>CCDS11865.1 PTPN2 gene_id:5771|Hs108|chr18 (415 aa)
initn: 2808 init1: 2808 opt: 2808 Z-score: 2985.5 bits: 561.4 E(32554): 5.7e-160
Smith-Waterman score: 2808; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KE0 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSESALRKRIREDRKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSESALRKRIREDRKAT
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 TAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFMSVILVGAFVGWTLFFQQNAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFMSVILVGAFVGWTLFFQQNAL
370 380 390 400 410
>>CCDS11863.1 PTPN2 gene_id:5771|Hs108|chr18 (387 aa)
initn: 2566 init1: 2566 opt: 2566 Z-score: 2729.2 bits: 513.9 E(32554): 1.1e-145
Smith-Waterman score: 2566; 100.0% identity (100.0% similar) in 381 aa overlap (1-381:1-381)
10 20 30 40 50 60
pF1KE0 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSESALRKRIREDRKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSESALRKRIREDRKAT
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 TAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFMSVILVGAFVGWTLFFQQNAL
:::::::::::::::::::::
CCDS11 TAQKVQQMKQRLNENERKRKRPRLTDT
370 380
>>CCDS77155.1 PTPN2 gene_id:5771|Hs108|chr18 (386 aa)
initn: 2426 init1: 2426 opt: 2426 Z-score: 2580.8 bits: 486.4 E(32554): 2e-137
Smith-Waterman score: 2426; 100.0% identity (100.0% similar) in 361 aa overlap (55-415:26-386)
30 40 50 60 70 80
pF1KE0 IRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYI
::::::::::::::::::::::::::::::
CCDS77 MYGKDGKGTNWMDQGDMECRMQEIDDHSRVKLQNAENDYINASLVDIEEAQRSYI
10 20 30 40 50
90 100 110 120 130 140
pF1KE0 LTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVK
60 70 80 90 100 110
150 160 170 180 190 200
pF1KE0 LLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGS
120 130 140 150 160 170
210 220 230 240 250 260
pF1KE0 LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQ
180 190 200 210 220 230
270 280 290 300 310 320
pF1KE0 LRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEK
240 250 260 270 280 290
330 340 350 360 370 380
pF1KE0 LTGDRCTGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LTGDRCTGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLY
300 310 320 330 340 350
390 400 410
pF1KE0 WQPILTKMGFMSVILVGAFVGWTLFFQQNAL
:::::::::::::::::::::::::::::::
CCDS77 WQPILTKMGFMSVILVGAFVGWTLFFQQNAL
360 370 380
>>CCDS11864.1 PTPN2 gene_id:5771|Hs108|chr18 (353 aa)
initn: 2349 init1: 2349 opt: 2349 Z-score: 2499.7 bits: 471.3 E(32554): 6.5e-133
Smith-Waterman score: 2349; 100.0% identity (100.0% similar) in 346 aa overlap (1-346:1-346)
10 20 30 40 50 60
pF1KE0 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSESALRKRIREDRKAT
::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSERPRLTDT
310 320 330 340 350
370 380 390 400 410
pF1KE0 TAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFMSVILVGAFVGWTLFFQQNAL
>>CCDS13430.1 PTPN1 gene_id:5770|Hs108|chr20 (435 aa)
initn: 1543 init1: 645 opt: 1493 Z-score: 1590.3 bits: 303.3 E(32554): 2.9e-82
Smith-Waterman score: 1549; 54.3% identity (77.1% similar) in 433 aa overlap (5-413:3-434)
10 20 30 40 50 60
pF1KE0 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
.:.:::..: . : .: .::.:. :.: ::::.:.:.::::::::::.::::.:
CCDS13 MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIK
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
:.. .::::::::. .:::::::::::::::::: ::: :::.::...::::::..:: :
CCDS13 LHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGS
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 VKCAQYWPT-DDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTT
.::::::: ...::.:..:.... :.:::.::::::. :.:::... ::: : ::::::
CCDS13 LKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 WPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKG
::::::::::::::::::::::::::.:.:::.:.:::::::::::: :.::::.::.:
CCDS13 WPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 DD---INIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKED
: ..::.:::.:::.::::::: :::::::.:.::::: : ::::.: .:::::.::
CCDS13 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHED
240 250 260 270 280 290
300 310 320 330
pF1KE0 LSPAFDH-----SPNKIMTEKYNG-------NRIGLEEEKLTGDRC-------TGLSSKM
: : .: : : . : .:: :. ..:: : . :..
CCDS13 LEPPPEHIPPPPRPPKRILEPHNGKCREFFPNHQWVKEETQEDKDCPIKEEKGSPLNAAP
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE0 QDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWL-YWQPILTKMGFMS
.... .:.:. . :: .. : . . :. . . : ::.:.:..: .
CCDS13 YGIESMSQDTEVRSRVV-GGSLRGAQAASPAKGEPSLPEKDEDHALSYWKPFLVNMCVAT
360 370 380 390 400 410
400 410
pF1KE0 VILVGAFVGWTLFFQQNAL
:. .::.. . ..:..:
CCDS13 VLTAGAYLCYRFLFNSNT
420 430
>>CCDS59306.1 PTPN2 gene_id:5771|Hs108|chr18 (410 aa)
initn: 1441 init1: 1441 opt: 1443 Z-score: 1537.7 bits: 293.5 E(32554): 2.5e-79
Smith-Waterman score: 2510; 94.3% identity (94.3% similar) in 404 aa overlap (1-381:1-404)
10 20 30 40 50 60
pF1KE0 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES
70 80 90 100 110 120
130 140 150 160
pF1KE0 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENIN---------------
:::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINYIENLWITLYLKLLM
130 140 150 160 170 180
170 180 190 200 210
pF1KE0 --------SGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCS
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LDVKRSLKSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCS
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE0 AGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAK
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE0 CIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 CIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKM
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE0 QDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFMSV
::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRPRLTDT
370 380 390 400 410
400 410
pF1KE0 ILVGAFVGWTLFFQQNAL
>>CCDS63309.1 PTPN1 gene_id:5770|Hs108|chr20 (362 aa)
initn: 1224 init1: 569 opt: 1179 Z-score: 1258.5 bits: 241.6 E(32554): 8.9e-64
Smith-Waterman score: 1230; 53.3% identity (75.4% similar) in 362 aa overlap (76-413:1-361)
50 60 70 80 90 100
pF1KE0 NRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQK
.:::::::::::::::::: ::: :::.::
CCDS63 MEEAQRSYILTQGPLPNTCGHFWEMVWEQK
10 20 30
110 120 130 140 150 160
pF1KE0 TKAVVMLNRIVEKESVKCAQYWPT-DDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENI
...::::::..:: :.::::::: ...::.:..:.... :.:::.::::::. :.:::.
CCDS63 SRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE0 NSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSG
.. ::: : ::::::::::::::::::::::::::::::::.:.:::.:.::::::::::
CCDS63 TTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSG
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE0 TFSLVDTCLVLMEKGDD---INIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKG
:: :.::::.::.: : ..::.:::.:::.::::::: :::::::.:.::::: : :
CCDS63 TFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMG
160 170 180 190 200 210
290 300 310 320
pF1KE0 DSSIQKRWKELSKEDLSPAFDH-----SPNKIMTEKYNG-------NRIGLEEEKLTGDR
:::.: .:::::.::: : .: : : . : .:: :. ..::
CCDS63 DSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKCREFFPNHQWVKEETQEDKD
220 230 240 250 260 270
330 340 350 360 370 380
pF1KE0 C-------TGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRW
: . :.. .... .:.:. . :: .. : . . :. . .
CCDS63 CPIKEEKGSPLNAAPYGIESMSQDTEVRSRVVGG-SLRGAQAASPAKGEPSLPEKDEDHA
280 290 300 310 320
390 400 410
pF1KE0 L-YWQPILTKMGFMSVILVGAFVGWTLFFQQNAL
: ::.:.:..: .:. .::.. . ..:..:
CCDS63 LSYWKPFLVNMCVATVLTAGAYLCYRFLFNSNT
330 340 350 360
>>CCDS55846.1 PTPRB gene_id:5787|Hs108|chr12 (1907 aa)
initn: 656 init1: 302 opt: 673 Z-score: 710.9 bits: 142.7 E(32554): 2.8e-33
Smith-Waterman score: 673; 36.3% identity (68.3% similar) in 303 aa overlap (6-301:1599-1888)
10 20 30
pF1KE0 MPTTIEREFEEL--DTQRRWQPLYLEIRNESHDYP
: .: .: :.. . : :... ...
CCDS55 IRRDRPLSVHLNLGQKGNRKTSCPIKINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQS
1570 1580 1590 1600 1610 1620
40 50 60 70 80
pF1KE0 HRVAKFPENRNRNRYRDVSPYDHSRVKLQNAEND----YINASLVDIEEAQRSYILTQGP
.: .::::..::: .. ::: .::::.:...: ::::: . .. .: ::.::::
CCDS55 CDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASYIPGNNFRREYIVTQGP
1630 1640 1650 1660 1670 1680
90 100 110 120 130 140
pF1KE0 LPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSED
::.: :: :::.:... .::... ::: ::: .:::.:.. . . . . ...:::.
CCDS55 LPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGD--LILQMLSES
1690 1700 1710 1720 1730 1740
150 160 170 180 190 200
pF1KE0 VKSYYTVHLLQLENINSGET-RTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPD
: .:.. ... . .. .. : : :::::.::: ::::. :...:. ::. . .:
CCDS55 VLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPG
1750 1760 1770 1780 1790 1800
210 220 230 240 250 260
pF1KE0 HGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFS
::.:.:::::.::.::: .: : ... :...: .. ..: .:. ..:: : .
CCDS55 AGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQ--YV
1810 1820 1830 1840 1850 1860
270 280 290 300 310 320
pF1KE0 YMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGD
:. .:.. : : ..: .:. .: :
CCDS55 YLH-----QCVR-DV---LRARKLRSEQENPLFPIYENVNPEYHRDPVYSRH
1870 1880 1890 1900
330 340 350 360 370 380
pF1KE0 RCTGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPI
>>CCDS55845.1 PTPRB gene_id:5787|Hs108|chr12 (1907 aa)
initn: 656 init1: 302 opt: 673 Z-score: 710.9 bits: 142.7 E(32554): 2.8e-33
Smith-Waterman score: 673; 36.3% identity (68.3% similar) in 303 aa overlap (6-301:1599-1888)
10 20 30
pF1KE0 MPTTIEREFEEL--DTQRRWQPLYLEIRNESHDYP
: .: .: :.. . : :... ...
CCDS55 IRRDRPLSVHLNLGQKGNRKTSCPIKINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQS
1570 1580 1590 1600 1610 1620
40 50 60 70 80
pF1KE0 HRVAKFPENRNRNRYRDVSPYDHSRVKLQNAEND----YINASLVDIEEAQRSYILTQGP
.: .::::..::: .. ::: .::::.:...: ::::: . .. .: ::.::::
CCDS55 CDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASYIPGNNFRREYIVTQGP
1630 1640 1650 1660 1670 1680
90 100 110 120 130 140
pF1KE0 LPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSED
::.: :: :::.:... .::... ::: ::: .:::.:.. . . . . ...:::.
CCDS55 LPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGD--LILQMLSES
1690 1700 1710 1720 1730 1740
150 160 170 180 190 200
pF1KE0 VKSYYTVHLLQLENINSGET-RTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPD
: .:.. ... . .. .. : : :::::.::: ::::. :...:. ::. . .:
CCDS55 VLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPG
1750 1760 1770 1780 1790 1800
210 220 230 240 250 260
pF1KE0 HGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFS
::.:.:::::.::.::: .: : ... :...: .. ..: .:. ..:: : .
CCDS55 AGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQ--YV
1810 1820 1830 1840 1850 1860
270 280 290 300 310 320
pF1KE0 YMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGD
:. .:.. : : ..: .:. .: :
CCDS55 YLH-----QCVR-DV---LRARKLRSEQENPLFPIYENVNPEYHRDPVYSRH
1870 1880 1890 1900
330 340 350 360 370 380
pF1KE0 RCTGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPI
>>CCDS44944.1 PTPRB gene_id:5787|Hs108|chr12 (1997 aa)
initn: 656 init1: 302 opt: 673 Z-score: 710.6 bits: 142.7 E(32554): 2.9e-33
Smith-Waterman score: 673; 36.3% identity (68.3% similar) in 303 aa overlap (6-301:1689-1978)
10 20 30
pF1KE0 MPTTIEREFEEL--DTQRRWQPLYLEIRNESHDYP
: .: .: :.. . : :... ...
CCDS44 IRRDRPLSVHLNLGQKGNRKTSCPIKINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQS
1660 1670 1680 1690 1700 1710
40 50 60 70 80
pF1KE0 HRVAKFPENRNRNRYRDVSPYDHSRVKLQNAEND----YINASLVDIEEAQRSYILTQGP
.: .::::..::: .. ::: .::::.:...: ::::: . .. .: ::.::::
CCDS44 CDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASYIPGNNFRREYIVTQGP
1720 1730 1740 1750 1760 1770
90 100 110 120 130 140
pF1KE0 LPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSED
::.: :: :::.:... .::... ::: ::: .:::.:.. . . . . ...:::.
CCDS44 LPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGD--LILQMLSES
1780 1790 1800 1810 1820 1830
150 160 170 180 190 200
pF1KE0 VKSYYTVHLLQLENINSGET-RTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPD
: .:.. ... . .. .. : : :::::.::: ::::. :...:. ::. . .:
CCDS44 VLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPG
1840 1850 1860 1870 1880 1890
210 220 230 240 250 260
pF1KE0 HGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFS
::.:.:::::.::.::: .: : ... :...: .. ..: .:. ..:: : .
CCDS44 AGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQ--YV
1900 1910 1920 1930 1940 1950
270 280 290 300 310 320
pF1KE0 YMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGD
:. .:.. : : ..: .:. .: :
CCDS44 YLH-----QCVR-DV---LRARKLRSEQENPLFPIYENVNPEYHRDPVYSRH
1960 1970 1980 1990
330 340 350 360 370 380
pF1KE0 RCTGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPI
415 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:21:51 2016 done: Sun Nov 6 21:21:51 2016
Total Scan time: 1.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]