Result of FASTA (omim) for
pFN21AE0789
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0789, 354 aa
1>>>pF1KE0789 354 - 354 aa - 354 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8531+/-0.000385; mu= 1.1964+/- 0.024
mean_var=426.3868+/-85.650, 0's: 0 Z-trim(125.5): 112 B-trim: 0 in 0/61
Lambda= 0.062112
statistics sampled from 49150 (49298) to 49150 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.824), E-opt: 0.2 (0.578), width: 16
Scan time: 7.680
The best scores are: opt bits E(85289)
NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 2425 230.6 4.2e-60
NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 882 92.3 1.8e-18
NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 882 92.4 1.9e-18
NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 480 56.2 1.2e-07
NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 471 55.5 2.2e-07
NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 ( 239) 450 53.4 6.2e-07
NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 383 47.5 4.6e-05
XP_006723629 (OMIM: 604612) PREDICTED: homeobox pr ( 202) 367 45.8 9.7e-05
NP_002500 (OMIM: 604612) homeobox protein Nkx-2.2 ( 273) 365 45.8 0.00013
NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 301 40.2 0.0081
XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 299 40.0 0.0088
>>NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 [Hom (354 aa)
initn: 2425 init1: 2425 opt: 2425 Z-score: 1200.1 bits: 230.6 E(85289): 4.2e-60
Smith-Waterman score: 2425; 100.0% identity (100.0% similar) in 354 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 LPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 AAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 RYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAG
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 PQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 PQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW
310 320 330 340 350
>>NP_003308 (OMIM: 118700,188550,600635,610978) homeobox (371 aa)
initn: 953 init1: 470 opt: 882 Z-score: 452.6 bits: 92.3 E(85289): 1.8e-18
Smith-Waterman score: 1199; 58.8% identity (73.7% similar) in 354 aa overlap (1-341:1-322)
10 20 30 40 50 60
pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA
::.::::::::::::::::.::.::: . :.:. ::::::.: .: ::
NP_003 MSMSPKHTTPFSVSDILSPLEESYKKVG--MEGG--GLGAPLAAYRQGQAAPP-------
10 20 30 40
70 80 90 100 110
pF1KE0 TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPP-GVSQFPHGAMGSYCNGGLGNMG
.:.:: .::. ::..:..:: ::: :: :. :.:.:.::::.::::.
NP_003 -TAAMQ-QHAV-GHHGAVTAA-----------YHMTAAGVPQLSHSAVGGYCNGNLGNMS
50 60 70 80 90
120 130 140 150 160 170
pF1KE0 ELPAYTDGMRGGAA-TGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGP
::: : : ::..:. ::::::::::. .:::::::..:.:..:::.: ...:..:...:
NP_003 ELPPYQDTMRNSASGPGWYGANPDPRFPAISRFMGPASGMNMSGMGGLGSLGDVSKNMAP
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE0 LHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQ
: .::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 L-----PSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQ
160 170 180 190 200 210
240 250 260 270 280
pF1KE0 NHRYKMKRQAKDKAAQQ-LQQE-------GGLGPPPPPPP---SPRRVAVPVLVKDGKPC
::::::::::::::::: :::. :: : : :::::::::::::::::
NP_003 NHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPVLVKDGKPC
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE0 QNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGAN
: :: :.:: :. : : : . . . . : . :.: :.: : :. :
NP_003 QAGA--PAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSP
280 290 300 310 320
350
pF1KE0 LLYGRTW
NP_003 DLAHHAASPAALQGQVSSLSHLNSSGSDYGTMSCSTLLYGRTW
330 340 350 360 370
>>NP_001073136 (OMIM: 118700,188550,600635,610978) homeo (401 aa)
initn: 953 init1: 470 opt: 882 Z-score: 452.2 bits: 92.4 E(85289): 1.9e-18
Smith-Waterman score: 1199; 58.8% identity (73.7% similar) in 354 aa overlap (1-341:31-352)
10 20 30
pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGA
::.::::::::::::::::.::.::: .
NP_001 MWSGGSGKARGWEAAAGGRSSPGRLSRRRIMSMSPKHTTPFSVSDILSPLEESYKKVG--
10 20 30 40 50
40 50 60 70 80 90
pF1KE0 MDGAPPGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPSHAMAGHNAAAAAAAAAAAAAAA
:.:. ::::::.: .: :: .:.:: .::. ::..:..::
NP_001 MEGG--GLGAPLAAYRQGQAAPP--------TAAMQ-QHAV-GHHGAVTAA---------
60 70 80 90
100 110 120 130 140
pF1KE0 ATYHMPP-GVSQFPHGAMGSYCNGGLGNMGELPAYTDGMRGGAA-TGWYGANPDPRYSSI
::: :: :. :.:.:.::::.::::.::: : : ::..:. ::::::::::. .:
NP_001 --YHMTAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAI
100 110 120 130 140 150
150 160 170 180 190 200
pF1KE0 SRFMGPSAGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKRRVLFSQAQVYELERRF
::::::..:.:..:::.: ...:..:...:: .::::::::::::::::::::::
NP_001 SRFMGPASGMNMSGMGGLGSLGDVSKNMAPL-----PSAPRRKRRVLFSQAQVYELERRF
160 170 180 190 200 210
210 220 230 240 250 260
pF1KE0 KQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQ-LQQE-------G
::::::::::::::::::::::::::::::::::::::::::::::: :::. :
NP_001 KQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGG
220 230 240 250 260 270
270 280 290 300 310
pF1KE0 GLGPPPPPPP---SPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSP
: : : :::::::::::::::::: :: :.:: :. : : : . . .
NP_001 GTGCPQQQQAQQQSPRRVAVPVLVKDGKPCQAGA--PAPGAASLQGHAQQQAQHQAQAAQ
280 290 300 310 320
320 330 340 350
pF1KE0 SPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW
. : . :.: :.: : :. :
NP_001 AAAAAISVGSGGAGLGAHPGHQPGSAGQSPDLAHHAASPAALQGQVSSLSHLNSSGSDYG
330 340 350 360 370 380
>>NP_004378 (OMIM: 108900,187500,217095,225250,600584,61 (324 aa)
initn: 434 init1: 335 opt: 480 Z-score: 258.6 bits: 56.2 E(85289): 1.2e-07
Smith-Waterman score: 484; 42.7% identity (62.9% similar) in 248 aa overlap (51-294:9-236)
30 40 50 60 70 80
pF1KE0 EETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPSHAMAGHNAAAAA
: : .. .. .: : : ::. .:
NP_004 MFPSPALTPTPFSVKDILNLEQQQRSLAAAGELSARLE
10 20 30
90 100 110 120 130
pF1KE0 AAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNM-GELPAYTDGMRGGAATGWYGA
:. : .. :... : . :..: :: .. .:: . . ..: . :
NP_004 ATLAPSSCMLAAFK--PEAYAGPEAA-----APGLPELRAELGRAPSPAKCASA---FPA
40 50 60 70 80
140 150 160 170 180 190
pF1KE0 NPD--PR-YSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKRRVLF
: :: ::. . : : . . .: .. :. . .: : ::: ::::
NP_004 APAFYPRAYSDPDPAKDPRA--EKKELCALQKAVELEKTEAD-NAERPRARRRRKPRVLF
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE0 SQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQL
:::::::::::::::.:::::::..:::...:: :::::::::.::: ::: .:.. . .
NP_004 SQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELV
150 160 170 180 190 200
260 270 280 290 300 310
pF1KE0 QQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELS
:: :::::::. ::.::::::.::::: : :.:
NP_004 ----GL-PPPPPPPA-RRIAVPVLVRDGKPCL-GDSAPYAPAYGVGLNPYGYNAYPAYPG
210 220 230 240 250
320 330 340 350
pF1KE0 PSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW
NP_004 YGGAACSPGYSCTAAYPAGPSPAQPATAAANNNFVNFGVGDLNAVQSPGIPQSNSGVSTL
260 270 280 290 300 310
>>NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 [Hom (364 aa)
initn: 469 init1: 342 opt: 471 Z-score: 253.7 bits: 55.5 E(85289): 2.2e-07
Smith-Waterman score: 486; 55.1% identity (65.9% similar) in 167 aa overlap (174-336:129-278)
150 160 170 180 190
pF1KE0 RYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAP----RRKRRVLFSQA
.. : .:: . : ::: :::::::
NP_660 DSCSEPKEHEEEPEVVRDRSQKSCQLKKSLETAGDCKAAEESERPKPRSRRKPRVLFSQA
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE0 QVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQE
::.:::::::::.:::::::::::: ..:: :::::::::.::: ::: .::. .
NP_660 QVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLE-----
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE0 GGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSP
:: :::: ::::::::::.::::: ::. : :: . :
NP_660 --LGAHAPPPP-PRRVAVPVLVRDGKPC----VTPSAQAYG----APYSVGASAYSYNSF
220 230 240 250 260
320 330 340 350
pF1KE0 PALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW
:: .: :.. :: :::
NP_660 PA-YGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTSAATTAMQPACSAAG
270 280 290 300 310 320
>>NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 [Hom (239 aa)
initn: 449 init1: 338 opt: 450 Z-score: 245.5 bits: 53.4 E(85289): 6.2e-07
Smith-Waterman score: 450; 51.7% identity (73.2% similar) in 149 aa overlap (186-334:81-225)
160 170 180 190 200 210
pF1KE0 AGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLS
: :.:::::::.::. ::::::.::.:::
NP_055 YPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLS
60 70 80 90 100 110
220 230 240 250 260 270
pF1KE0 APEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRV
:::::.:::...::::::::::::::::.:: :. .: . . .. . : :::
NP_055 APEREQLASLLRLTPTQVKIWFQNHRYKLKR-ARAPGAAESPDLAASAELHAAPGLLRRV
120 130 140 150 160
280 290 300 310 320 330
pF1KE0 AVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAA
.:::::.::.:: .:.. . : :. : .: : :. ::. :::..:. . :
NP_055 VVPVLVRDGQPCGGGGGGEV-GTAAAQEKCGAPPAAACPL-PGYPAF-GPGSALGLFPAY
170 180 190 200 210 220
340 350
pF1KE0 AGEYSGGVLGANLLYGRTW
NP_055 QHLASPALVSWNW
230
>>NP_001129743 (OMIM: 217095,611770) homeobox protein Nk (301 aa)
initn: 569 init1: 332 opt: 383 Z-score: 211.9 bits: 47.5 E(85289): 4.6e-05
Smith-Waterman score: 474; 45.1% identity (62.5% similar) in 224 aa overlap (152-354:88-301)
130 140 150 160 170
pF1KE0 PAYTDGMRGGAATGWYGANPDPRYSSISRFMG-PSAGVNVAG-MGSLT-----GIADAAK
:: :. :.:.:. .:. : :.....
NP_001 AGGGGGDRKLDGSEPPGGPCEAVLEMDAERMGEPQPGLNAASPLGGGTRVPERGVGNSGD
60 70 80 90 100 110
180 190 200 210 220 230
pF1KE0 SLGPLHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVK
:. .. : ::: ::::::::: ::::::::.:::::::::::: ..:: ::::
NP_001 SVRGGRSEQPKARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVK
120 130 140 150 160 170
240 250 260 270 280 290
pF1KE0 IWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQN---GA
:::::.::: ::: .::. :. : : .::::::::::.::::: . ::
NP_001 IWFQNRRYKCKRQRQDKS---LELAGH-------PLTPRRVAVPVLVRDGKPCLGPGPGA
180 190 200 210 220
300 310 320 330 340
pF1KE0 ST-PTPGQAGPQP--------PAPTPAP--ELEELSPSPPALHGPGGGLAALDAAAGEYS
. :.: .:. .: :: : .:: :: : : .. . .. .
NP_001 PAFPSPYSAAVSPYSCYGGYSGAPYGAGYGTCYAGAPSGPAPHTPLASAGFGHGGQNATP
230 240 250 260 270 280
350
pF1KE0 GGVLGANLLYGRTW
: :.:.: :.:
NP_001 QGHLAATLQGVRAW
290 300
>>XP_006723629 (OMIM: 604612) PREDICTED: homeobox protei (202 aa)
initn: 533 init1: 357 opt: 367 Z-score: 206.1 bits: 45.8 E(85289): 9.7e-05
Smith-Waterman score: 468; 52.3% identity (70.3% similar) in 155 aa overlap (137-288:3-145)
110 120 130 140 150 160
pF1KE0 MGSYCNGGLGNMGELPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSL
..:. :..: . . : .::. .:
XP_006 MIFSATSPPKFSP-TLLHGLAAGAPPQDSSSK
10 20 30
170 180 190 200 210 220
pF1KE0 TGIADAAKSLG---PLHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLA
. .: .: .... :. .::::::::.::.:::::::.::.:::::::::::
XP_006 SPEPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLA
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE0 SMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKD
:.:.::::::::::::::::::: .: : : ::::::::::::.:
XP_006 SLIRLTPTQVKIWFQNHRYKMKRARAEK-----------GMEVTPLPSPRRVAVPVLVRD
100 110 120 130 140
290 300 310 320 330 340
pF1KE0 GKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGV
::::.
XP_006 GKPCHALKAQDLAAATFQAGIPFSAYSAQSLQHMQYNAQYSSASTPQYPTAHPLVQAQQW
150 160 170 180 190 200
>>NP_002500 (OMIM: 604612) homeobox protein Nkx-2.2 [Hom (273 aa)
initn: 536 init1: 357 opt: 365 Z-score: 203.7 bits: 45.8 E(85289): 0.00013
Smith-Waterman score: 474; 46.9% identity (63.0% similar) in 192 aa overlap (117-288:36-216)
90 100 110 120 130 140
pF1KE0 AAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGELPAYTDGMRGGAATGWYGANP--DPR
: : :: : : .: . : .:
NP_002 TKTGFSVKDILDLPDTNDEEGSVAEGPEEENEGPEPAKRAGPLGQGALDAVQSLPLKNPF
10 20 30 40 50 60
150 160 170 180
pF1KE0 YSS----ISRFMGPSAGVNVAGMGSLTGIA---DAAKSLGP-----------LHAAAAAA
:.: .:... . :.. . : .: ...:: : .... :
NP_002 YDSSDNPYTRWLASTEGLQYSLHGLAAGAPPQDSSSKSPEPSADESPDNDKETPGGGGDA
70 80 90 100 110 120
190 200 210 220 230 240
pF1KE0 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR
. .::::::::.::.:::::::.::.::::::::::::.:.:::::::::::::::::::
NP_002 GKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR
130 140 150 160 170 180
250 260 270 280 290 300
pF1KE0 QAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAP
.: : : ::::::::::::.:::::.
NP_002 ARAEK-----------GMEVTPLPSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPF
190 200 210 220 230
310 320 330 340 350
pF1KE0 TPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW
NP_002 SAYSAQSLQHMQYNAQYSSASTPQYPTAHPLVQAQQWTW
240 250 260 270
>>NP_061815 (OMIM: 142992,612109) homeobox protein HMX1 (348 aa)
initn: 303 init1: 215 opt: 301 Z-score: 171.5 bits: 40.2 E(85289): 0.0081
Smith-Waterman score: 352; 30.7% identity (51.7% similar) in 352 aa overlap (5-336:8-335)
10 20 30 40 50
pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSS
: ..:: .:..: ::. . . : : :. : .
NP_061 MPDELTEPGRATPARASSFL--IENLLAAEAKGAGRATQGDGSREDEEEDDDDPEDEDAE
10 20 30 40 50
60 70 80 90 100
pF1KE0 QAATVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATY--HMPPGVSQ-FPHGAMGS-----
:: .. . .:: . .. : : : . .: . ::: . : : :.
NP_061 QARRRRLQRRRQLLAGTGPGGEARARALLGPGALGLGPRPPPGPGPPFALGCGGAARWYP
60 70 80 90 100 110
110 120 130 140 150
pF1KE0 YCNGGLGNMGELPAYTD------GMRGGAATGWYGANPDP----RYSSISRFMGPSAGVN
.:: :. : : .: : . : : : . .: : : .. ::.::..
NP_061 RAHGGYGG-GLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTE
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE0 VAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKR-RVLFSQAQVYELERRFKQQKYLSAPE
: . .:.. . : ........ :.:. :..::..::..:: : ..:::. :
NP_061 EA-----SELAEVPAAAGETRGGVGVGGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAE
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 REHLASMIHLTPTQVKIWFQNHRYKMKRQ-AKDKAAQQLQQEGGLGPPPPPPPSPRRVAV
: ::. ..:: :::::::::.: : ::: : . : .:. :: . : : :
NP_061 RAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLS----------PPGAQRLVRV
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAG
::: ... : .:. :. : ::.: : : .: :: : :::. :::
NP_061 PVLYHESPPAAAAAGPPATLPFPLAPAAPAPPPPLLGFSG---ALAYP---LAAFPAAAS
290 300 310 320 330
340 350
pF1KE0 EYSGGVLGANLLYGRTW
NP_061 VPFLRAQMPGLV
340
354 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:28:50 2016 done: Tue Nov 8 04:28:52 2016
Total Scan time: 7.680 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]