Result of FASTA (ccds) for
pFN21AE0761
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0761, 337 aa
1>>>pF1KE0761 337 - 337 aa - 337 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3977+/-0.000758; mu= 12.6128+/- 0.046
mean_var=136.4288+/-26.334, 0's: 0 Z-trim(113.1): 102 B-trim: 53 in 1/53
Lambda= 0.109805
statistics sampled from 13626 (13755) to 13626 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.423), width: 16
Scan time: 2.700
The best scores are: opt bits E(32554)
CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 337) 2305 376.1 2.2e-104
CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 326) 1949 319.7 2e-87
CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 226) 1362 226.6 1.6e-59
CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17 ( 358) 999 169.3 4.4e-42
CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 ( 491) 345 65.8 8.5e-11
CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 ( 505) 345 65.8 8.6e-11
>>CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (337 aa)
initn: 2305 init1: 2305 opt: 2305 Z-score: 1987.5 bits: 376.1 E(32554): 2.2e-104
Smith-Waterman score: 2305; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGL
250 260 270 280 290 300
310 320 330
pF1KE0 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
:::::::::::::::::::::::::::::::::::::
CCDS45 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
310 320 330
>>CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (326 aa)
initn: 2353 init1: 1948 opt: 1949 Z-score: 1682.8 bits: 319.7 E(32554): 2e-87
Smith-Waterman score: 2186; 96.7% identity (96.7% similar) in 337 aa overlap (1-337:1-326)
10 20 30 40 50 60
pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGL
::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS45 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTE-----------ESGL
250 260 270 280
310 320 330
pF1KE0 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
:::::::::::::::::::::::::::::::::::::
CCDS45 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
290 300 310 320
>>CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (226 aa)
initn: 1353 init1: 1353 opt: 1362 Z-score: 1182.3 bits: 226.6 E(32554): 1.6e-59
Smith-Waterman score: 1362; 89.3% identity (91.0% similar) in 233 aa overlap (107-337:1-226)
80 90 100 110 120 130
pF1KE0 KAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRG--LPPAHDPWEPKPDWAHTGSHSSE
::. : :::. : : : .
CCDS58 MARSGSATPPARAPGAP-P------RSPPQ
10 20
140 150 160 170 180 190
pF1KE0 AGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQD
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RLVQDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQD
30 40 50 60 70 80
200 210 220 230 240 250
pF1KE0 RLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPS
90 100 110 120 130 140
260 270 280 290 300 310
pF1KE0 PVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKAR
150 160 170 180 190 200
320 330
pF1KE0 AMRVNKRAPQMDWNRKREIFSNF
:::::::::::::::::::::::
CCDS58 AMRVNKRAPQMDWNRKREIFSNF
210 220
>>CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17 (358 aa)
initn: 1083 init1: 966 opt: 999 Z-score: 869.0 bits: 169.3 E(32554): 4.4e-42
Smith-Waterman score: 1104; 52.1% identity (72.0% similar) in 361 aa overlap (2-337:6-358)
10 20 30 40 50
pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRL
:: :: :::: : .: .:::::::::::. ::.:: :::::::: :.: :::::
CCDS11 MSADAAAGAPL-PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 VEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEM--AQRGLPP
::::: ::: :::.:::.::.:. . .:::::: ::::.:.. . ::. ::.. :
CCDS11 VEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEA-PG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 AHDPWEPKPDWAHTGSHSSEAGKKDVSGP-LRELRPRLCHLRKGPQGYGFNLHSDKSRPG
.: : .. ... .: . : : : :::::::: ..:::.:::::::::::.::
CCDS11 QAEP--PAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETD
:.:::::: ::: ::::::::..:::: .:: .:..::..:.: ::..::::: :::
CCDS11 QFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD
180 190 200 210 220 230
240 250 260 270
pF1KE0 EHFKRLRVTPTEEHVEGPLPSPVTNGT------------------SPAQLNGGSACSSR-
: ::. :: :..::..:::: : ::: :: . ..:. .:.
CCDS11 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEE
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE0 ---SDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR
.: : .. .: .:. ..::. : .. . : :::.:. : .::::::::..:
CCDS11 LNSQDSPPKQDSTAPSSTSSSDPI----LDFNISLAMAKERAHQKRSSKRAPQMDWSKKN
300 310 320 330 340 350
pF1KE0 EIFSNF
:.:::.
CCDS11 ELFSNL
>>CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 (491 aa)
initn: 584 init1: 247 opt: 345 Z-score: 307.3 bits: 65.8 E(32554): 8.5e-11
Smith-Waterman score: 440; 37.1% identity (57.2% similar) in 264 aa overlap (7-265:153-365)
10 20 30
pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFI
.:::::..:. : :.:: . .: .: :
CCDS84 LLTVLARHAHDVARAQLGEDAHLCPTLGPGVRPRLCHIVKDEGGFGFSV--THGNQGPFW
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE0 RRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEEL
. :. :: :.. : ::.::::. :. :. :::. :..:.
CCDS84 LVLSTGGAAERAGVPPGARLLEVNGLWQSGQ--------------QVTLLVAGPEVEEQC
190 200 210 220
100 110 120 130 140 150
pF1KE0 RRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRK
: : ::: : : :: : . :: ::.:
CCDS84 R-----------QLGLPLAAPLAE---GWAL---------------PTK---PRCLHLEK
230 240 250
160 170 180 190 200 210
pF1KE0 GPQGYGFNLHSDKS---RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVV
::::.:: :. .:. ::::.. :::: :: ..:..: :::. : :..:::: : :.:
CCDS84 GPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETV
260 270 280 290 300 310
220 230 240 250 260 270
pF1KE0 ASIKAREDEARLLVVDPETDEHFKRLRVTPTE--EHVEGPLPSPVTNGTSPAQLNGGSAC
. :... . . : :::::.:. :. .:..: :..:.: :: :.: :.:
CCDS84 SRIQGQGSCVSLTVVDPEADRFFSMVRLSPLLFLENTEAP-ASP--RGSSSASLVETEDP
320 330 340 350 360 370
280 290 300 310 320 330
pF1KE0 SSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR
CCDS84 SLEDTSVPSVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGD
380 390 400 410 420 430
>>CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 (505 aa)
initn: 727 init1: 247 opt: 345 Z-score: 307.2 bits: 65.8 E(32554): 8.6e-11
Smith-Waterman score: 506; 39.0% identity (61.0% similar) in 264 aa overlap (7-265:153-379)
10 20 30
pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFI
.:::::..:. : :.:: . .: .: :
CCDS53 LLTVLARHAHDVARAQLGEDAHLCPTLGPGVRPRLCHIVKDEGGFGFSV--THGNQGPFW
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE0 RRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEEL
. :. :: :.. : ::.:::::.:: ::.:..... :. :::. :..:.
CCDS53 LVLSTGGAAERAGVPPGARLLEVNGVSVEKFTHNQLTRKLWQSGQQVTLLVAGPEVEEQC
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE0 RRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRK
: : ::: : : :: : . :: ::.:
CCDS53 R-----------QLGLPLAAPLAE---GWAL---------------PTK---PRCLHLEK
250 260
160 170 180 190 200 210
pF1KE0 GPQGYGFNLHSDKS---RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVV
::::.:: :. .:. ::::.. :::: :: ..:..: :::. : :..:::: : :.:
CCDS53 GPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETV
270 280 290 300 310 320
220 230 240 250 260 270
pF1KE0 ASIKAREDEARLLVVDPETDEHFKRLRVTPTE--EHVEGPLPSPVTNGTSPAQLNGGSAC
. :... . . : :::::.:. :. .:..: :..:.: :: :.: :.:
CCDS53 SRIQGQGSCVSLTVVDPEADRFFSMVRLSPLLFLENTEAP-ASP--RGSSSASLVETEDP
330 340 350 360 370 380
280 290 300 310 320 330
pF1KE0 SSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR
CCDS53 SLEDTSVPSVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGD
390 400 410 420 430 440
337 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:40:04 2016 done: Sun Nov 6 10:40:05 2016
Total Scan time: 2.700 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]