Result of FASTA (omim) for
pFN21AE0292
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0292, 252 aa
1>>>pF1KE0292 252 - 252 aa - 252 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5340+/-0.000296; mu= 15.7986+/- 0.018
mean_var=121.6558+/-24.690, 0's: 0 Z-trim(120.5): 332 B-trim: 259 in 2/56
Lambda= 0.116281
statistics sampled from 35434 (35894) to 35434 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.421), width: 16
Scan time: 7.660
The best scores are: opt bits E(85289)
XP_011520785 (OMIM: 614147) PREDICTED: complement ( 252) 1767 306.7 2.6e-83
NP_997302 (OMIM: 614147) complement C1q tumor necr ( 252) 1767 306.7 2.6e-83
XP_016884062 (OMIM: 614910) PREDICTED: complement ( 259) 823 148.3 1.2e-35
XP_016884063 (OMIM: 614910) PREDICTED: complement ( 259) 823 148.3 1.2e-35
XP_016884061 (OMIM: 614910) PREDICTED: complement ( 259) 823 148.3 1.2e-35
XP_011528159 (OMIM: 614910) PREDICTED: complement ( 259) 823 148.3 1.2e-35
XP_016884060 (OMIM: 614910) PREDICTED: complement ( 259) 823 148.3 1.2e-35
XP_016884059 (OMIM: 614910) PREDICTED: complement ( 259) 823 148.3 1.2e-35
NP_114116 (OMIM: 614910) complement C1q tumor necr ( 278) 823 148.4 1.3e-35
NP_872292 (OMIM: 614910) complement C1q tumor necr ( 278) 823 148.4 1.3e-35
XP_016884058 (OMIM: 614910) PREDICTED: complement ( 278) 823 148.4 1.3e-35
XP_016879615 (OMIM: 610365) PREDICTED: complement ( 199) 755 136.8 2.8e-32
NP_940996 (OMIM: 610365) complement C1q tumor necr ( 199) 755 136.8 2.8e-32
NP_112230 (OMIM: 610365) complement C1q tumor necr ( 281) 755 137.0 3.6e-32
NP_940995 (OMIM: 610365) complement C1q tumor necr ( 281) 755 137.0 3.6e-32
NP_699203 (OMIM: 610365) complement C1q tumor necr ( 281) 755 137.0 3.6e-32
XP_006721729 (OMIM: 610365) PREDICTED: complement ( 291) 755 137.0 3.6e-32
XP_006721727 (OMIM: 610365) PREDICTED: complement ( 330) 755 137.0 3.9e-32
XP_006721726 (OMIM: 610365) PREDICTED: complement ( 379) 755 137.1 4.3e-32
XP_016872655 (OMIM: 614911) PREDICTED: complement ( 329) 324 64.7 2.3e-10
NP_114115 (OMIM: 614911) complement C1q tumor necr ( 329) 324 64.7 2.3e-10
XP_016872654 (OMIM: 614911) PREDICTED: complement ( 329) 324 64.7 2.3e-10
NP_001008224 (OMIM: 615229) complement C1q-like pr ( 238) 321 64.1 2.6e-10
NP_057075 (OMIM: 120550,613652) complement C1q sub ( 245) 307 61.7 1.4e-09
NP_001107573 (OMIM: 120575,613652) complement C1q ( 245) 305 61.4 1.7e-09
NP_758957 (OMIM: 120575,613652) complement C1q sub ( 245) 305 61.4 1.7e-09
NP_001171271 (OMIM: 605441,612556) adiponectin pre ( 244) 302 60.9 2.4e-09
NP_004788 (OMIM: 605441,612556) adiponectin precur ( 244) 302 60.9 2.4e-09
XP_011536572 (OMIM: 615229) PREDICTED: complement ( 227) 290 58.8 9.4e-09
NP_001290067 (OMIM: 614285) complement C1q and tum ( 333) 292 59.4 9.5e-09
NP_001290066 (OMIM: 614285) complement C1q and tum ( 333) 292 59.4 9.5e-09
NP_848635 (OMIM: 614285) complement C1q and tumor ( 333) 292 59.4 9.5e-09
XP_011533372 (OMIM: 614148) PREDICTED: complement ( 333) 282 57.7 3.1e-08
NP_001007538 (OMIM: 614148) complement C1q and tum ( 333) 282 57.7 3.1e-08
NP_001265360 (OMIM: 605670,608752) complement C1q ( 243) 277 56.7 4.5e-08
NP_056460 (OMIM: 605670,608752) complement C1q tum ( 243) 277 56.7 4.5e-08
NP_006679 (OMIM: 611586) C1q-related factor precur ( 258) 269 55.4 1.2e-07
NP_001034860 (OMIM: 612978) cerebellin-3 precursor ( 205) 201 43.9 0.00027
NP_001846 (OMIM: 120325) collagen alpha-1(XV) chai (1388) 199 44.5 0.0012
XP_011516516 (OMIM: 120325) PREDICTED: collagen al (1388) 199 44.5 0.0012
XP_016870728 (OMIM: 608461,615155) PREDICTED: coll (1214) 197 44.1 0.0014
XP_011517446 (OMIM: 608461,615155) PREDICTED: coll (1352) 197 44.2 0.0015
XP_011517445 (OMIM: 608461,615155) PREDICTED: coll (1353) 197 44.2 0.0015
XP_011517444 (OMIM: 608461,615155) PREDICTED: coll (1401) 197 44.2 0.0015
XP_016883155 (OMIM: 120270,600969,603932) PREDICTE ( 486) 191 42.6 0.0015
XP_016871179 (OMIM: 120350,616720) PREDICTED: coll ( 657) 192 43.0 0.0017
XP_011526847 (OMIM: 120270,600969,603932) PREDICTE ( 552) 191 42.7 0.0017
XP_016871176 (OMIM: 120350,616720) PREDICTED: coll ( 672) 192 43.0 0.0017
XP_016871172 (OMIM: 120350,616720) PREDICTED: coll ( 684) 192 43.0 0.0017
XP_016871171 (OMIM: 120350,616720) PREDICTED: coll ( 684) 192 43.0 0.0017
>>XP_011520785 (OMIM: 614147) PREDICTED: complement C1q (252 aa)
initn: 1767 init1: 1767 opt: 1767 Z-score: 1616.7 bits: 306.7 E(85289): 2.6e-83
Smith-Waterman score: 1767; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT
190 200 210 220 230 240
250
pF1KE0 FSGHLVKPAAEL
::::::::::::
XP_011 FSGHLVKPAAEL
250
>>NP_997302 (OMIM: 614147) complement C1q tumor necrosis (252 aa)
initn: 1767 init1: 1767 opt: 1767 Z-score: 1616.7 bits: 306.7 E(85289): 2.6e-83
Smith-Waterman score: 1767; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT
190 200 210 220 230 240
250
pF1KE0 FSGHLVKPAAEL
::::::::::::
NP_997 FSGHLVKPAAEL
250
>>XP_016884062 (OMIM: 614910) PREDICTED: complement C1q (259 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.7 bits: 148.3 E(85289): 1.2e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:37-255)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
XP_016 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
XP_016 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
XP_016 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
XP_016 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
190 200 210 220 230 240
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
XP_016 DTYITFSGHLIKAEDD
250
>>XP_016884063 (OMIM: 614910) PREDICTED: complement C1q (259 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.7 bits: 148.3 E(85289): 1.2e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:37-255)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
XP_016 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
XP_016 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
XP_016 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
XP_016 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
190 200 210 220 230 240
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
XP_016 DTYITFSGHLIKAEDD
250
>>XP_016884061 (OMIM: 614910) PREDICTED: complement C1q (259 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.7 bits: 148.3 E(85289): 1.2e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:37-255)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
XP_016 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
XP_016 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
XP_016 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
XP_016 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
190 200 210 220 230 240
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
XP_016 DTYITFSGHLIKAEDD
250
>>XP_011528159 (OMIM: 614910) PREDICTED: complement C1q (259 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.7 bits: 148.3 E(85289): 1.2e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:37-255)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
XP_011 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
XP_011 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
XP_011 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
XP_011 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
190 200 210 220 230 240
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
XP_011 DTYITFSGHLIKAEDD
250
>>XP_016884060 (OMIM: 614910) PREDICTED: complement C1q (259 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.7 bits: 148.3 E(85289): 1.2e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:37-255)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
XP_016 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
XP_016 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
XP_016 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
XP_016 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
190 200 210 220 230 240
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
XP_016 DTYITFSGHLIKAEDD
250
>>XP_016884059 (OMIM: 614910) PREDICTED: complement C1q (259 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.7 bits: 148.3 E(85289): 1.2e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:37-255)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
XP_016 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
XP_016 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
XP_016 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
XP_016 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
190 200 210 220 230 240
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
XP_016 DTYITFSGHLIKAEDD
250
>>NP_114116 (OMIM: 614910) complement C1q tumor necrosis (278 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.4 bits: 148.4 E(85289): 1.3e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:56-274)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
NP_114 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
NP_114 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
NP_114 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
NP_114 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
210 220 230 240 250 260
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
NP_114 DTYITFSGHLIKAEDD
270
>>NP_872292 (OMIM: 614910) complement C1q tumor necrosis (278 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 760.4 bits: 148.4 E(85289): 1.3e-35
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:56-274)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
NP_872 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
NP_872 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
NP_872 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
NP_872 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
210 220 230 240 250 260
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
NP_872 DTYITFSGHLIKAEDD
270
252 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 14:26:59 2016 done: Mon Nov 7 14:27:01 2016
Total Scan time: 7.660 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]