Result of FASTA (ccds) for
pFN21AE0292
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0292, 252 aa
1>>>pF1KE0292 252 - 252 aa - 252 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1603+/-0.000662; mu= 17.9666+/- 0.040
mean_var=104.2252+/-21.177, 0's: 0 Z-trim(113.6): 122 B-trim: 0 in 0/53
Lambda= 0.125628
statistics sampled from 14092 (14227) to 14092 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.437), width: 16
Scan time: 2.610
The best scores are: opt bits E(32554)
CCDS32358.1 C1QTNF8 gene_id:390664|Hs108|chr16 ( 252) 1767 329.8 1.1e-90
CCDS13943.1 C1QTNF6 gene_id:114904|Hs108|chr22 ( 278) 823 158.8 3.7e-39
CCDS11762.1 C1QTNF1 gene_id:114897|Hs108|chr17 ( 199) 755 146.3 1.5e-35
CCDS11761.1 C1QTNF1 gene_id:114897|Hs108|chr17 ( 281) 755 146.4 1.9e-35
CCDS7942.1 C1QTNF4 gene_id:114900|Hs108|chr11 ( 329) 324 68.4 6.9e-12
CCDS31793.1 C1QL4 gene_id:338761|Hs108|chr12 ( 238) 321 67.7 8.1e-12
CCDS226.1 C1QA gene_id:712|Hs108|chr1 ( 245) 307 65.2 4.8e-11
CCDS227.1 C1QC gene_id:714|Hs108|chr1 ( 245) 305 64.8 6.2e-11
CCDS3284.1 ADIPOQ gene_id:9370|Hs108|chr3 ( 244) 302 64.3 9e-11
>>CCDS32358.1 C1QTNF8 gene_id:390664|Hs108|chr16 (252 aa)
initn: 1767 init1: 1767 opt: 1767 Z-score: 1741.7 bits: 329.8 E(32554): 1.1e-90
Smith-Waterman score: 1767; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT
190 200 210 220 230 240
250
pF1KE0 FSGHLVKPAAEL
::::::::::::
CCDS32 FSGHLVKPAAEL
250
>>CCDS13943.1 C1QTNF6 gene_id:114904|Hs108|chr22 (278 aa)
initn: 1056 init1: 803 opt: 823 Z-score: 816.6 bits: 158.8 E(32554): 3.7e-39
Smith-Waterman score: 823; 54.5% identity (77.0% similar) in 222 aa overlap (26-247:56-274)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRG
: .:: : : :.::. . . ..
CCDS13 GPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDP-AHVSSAS--SSGRPHA
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE0 LPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRA
::..:: :.: ::::.::. : : : :.::: : : :: .:.::..: ::: :..
CCDS13 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE0 YAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNY
. ::::::. .:::.. ::.. :. .::::: ::.:.:.: . :.::.:::::.:::
CCDS13 FFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNY
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE0 KETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHG
::::.::: :.. :..:::::::::.::.::.:: :: :: ::::.:.:.:.::::..
CCDS13 KETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDF
210 220 230 240 250 260
240 250
pF1KE0 DLYITFSGHLVKPAAEL
: ::::::::.:
CCDS13 DTYITFSGHLIKAEDD
270
>>CCDS11762.1 C1QTNF1 gene_id:114897|Hs108|chr17 (199 aa)
initn: 940 init1: 735 opt: 755 Z-score: 751.6 bits: 146.3 E(32554): 1.5e-35
Smith-Waterman score: 755; 57.6% identity (79.1% similar) in 191 aa overlap (61-251:8-198)
40 50 60 70 80 90
pF1KE0 RPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPP
: :.: :::::::. : :: :. :: :
CCDS11 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSA
10 20 30
100 110 120 130 140 150
pF1KE0 GARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFD
:::: : .::::..: :: :. ::::::::.. .::. ..:.: ::::.::: :.
CCDS11 GARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFN
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE0 LAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLL
. .:.: : :::.::.:::::::: :::::::: :.. ...:.:: ..::.::.:::::
CCDS11 MFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLE
100 110 120 130 140 150
220 230 240 250
pF1KE0 LAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKPAAEL
: : ::::... .:.:::..:. : ::::::.::: :.:
CCDS11 LREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP
160 170 180 190
>>CCDS11761.1 C1QTNF1 gene_id:114897|Hs108|chr17 (281 aa)
initn: 925 init1: 735 opt: 755 Z-score: 749.9 bits: 146.4 E(32554): 1.9e-35
Smith-Waterman score: 775; 51.3% identity (70.7% similar) in 232 aa overlap (20-251:67-280)
10 20 30 40
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWR
::: :..:: :. : . :
CCDS11 WEGTEELPSPPDHAERAEEQHEKYRPSQDQGLPASRCLRCCDPGTSMYPATAV-------
40 50 60 70 80
50 60 70 80 90 100
pF1KE0 GDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG
: :.: :::::::. : :: :. :: : :::: : .::::..: ::
CCDS11 -----------PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG
90 100 110 120 130
110 120 130 140 150 160
pF1KE0 AACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLN
:. ::::::::.. .::. ..:.: ::::.::: :.. .:.: : :::.::.:::
CCDS11 ERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE0 VHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNA
::::: :::::::: :.. ...:.:: ..::.::.::::: : : ::::... .:.::
CCDS11 VHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENA
200 210 220 230 240 250
230 240 250
pF1KE0 IYGEHGDLYITFSGHLVKPAAEL
:..:. : ::::::.::: :.:
CCDS11 IFSEELDTYITFSGYLVKHATEP
260 270 280
>>CCDS7942.1 C1QTNF4 gene_id:114900|Hs108|chr11 (329 aa)
initn: 492 init1: 214 opt: 324 Z-score: 326.9 bits: 68.4 E(32554): 6.9e-12
Smith-Waterman score: 324; 43.0% identity (66.9% similar) in 151 aa overlap (106-248:168-313)
80 90 100 110 120 130
pF1KE0 GVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSD----
:::. :. :::..: ..: .::
CCDS79 GAPQYALGAPGATFSGYLVYADADADAPARGPPAPPEPRS--AFSAARTRSLVGSDAGPG
140 150 160 170 180 190
140 150 160 170 180
pF1KE0 -HFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPA-
. : . ::::.::. : :: ::: : : .::.::.:... : ...: :: .
CCDS79 PRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPRKTLSVKLMKNRDEVQ
200 210 220 230 240 250
190 200 210 220 230 240
pF1KE0 AVLYAQ-PSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDN-AIYGEHGDLYITFSGHLVK
:..: . :.: ::.::.:: : ::::: ....:.:. . :..:: :::::: ::
CCDS79 AMIYDDGASRRREMQSQSVMLALRRGDAVW--LLSHDHDGYGAYSNHGK-YITFSGFLVY
260 270 280 290 300 310
250
pF1KE0 PAAEL
:
CCDS79 PDLAPAAPPGLGASELL
320
>>CCDS31793.1 C1QL4 gene_id:338761|Hs108|chr12 (238 aa)
initn: 279 init1: 163 opt: 321 Z-score: 325.6 bits: 67.7 E(32554): 8.1e-12
Smith-Waterman score: 329; 32.2% identity (52.9% similar) in 255 aa overlap (6-248:4-237)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPP-GPYARVSDRDLWRGDLWRGLPRV
:::.:. : : . : . . :: . : :: :: : :
CCDS31 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGP----------RGPGPDGAPAS
10 20 30 40
60 70 80 90 100 110
pF1KE0 RPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG--------AA
: . : :::.: ::.:: : :::: :: :. :. : :::: ::
CCDS31 VPPFP----PGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE0 CRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVH
:: .: :. : . .... :: ..:. .:.. :.:.: : .:::::.. .:
CCDS31 GYVPRIAFYAGLRRP-H--EGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVL
110 120 130 140 150 160
180 190 200 210 220
pF1KE0 TWNYKETYL--HIMLNRRPAAVLYAQPSERSVMQAQ-SLMLLLAAGDAVWVRMFQRDRDN
. : . .: : . : :: .... :. :..: : .:: :.... : .
CCDS31 MRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL---D-GG
170 180 190 200 210
230 240 250
pF1KE0 AIYGEHGDLYITFSGHLVKPAAEL
..: . . : :::: .. :
CCDS31 KVHGGNTNKYSTFSGFIIYPD
220 230
>>CCDS226.1 C1QA gene_id:712|Hs108|chr1 (245 aa)
initn: 214 init1: 168 opt: 307 Z-score: 311.8 bits: 65.2 E(32554): 4.8e-11
Smith-Waterman score: 307; 32.6% identity (56.2% similar) in 233 aa overlap (30-250:26-245)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCR-PAWPPGPYARVSDRDL--WRGDLWR-GL
:: : : .: . : .:. . :
CCDS22 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGA
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 PRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAY
: .: :. :::..:: : : :. : :: : : .: : :: : :: .
CCDS22 PGIRT--GIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 AAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHT-WNY
:::. ::. ... .: ::: ..: . .. .:::.::::: :.....: . :
CCDS22 PAFSAIRRNPPMGGN---VVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQW--
120 130 140 150 160
180 190 200 210 220
pF1KE0 KETYLHIMLNRRPA---AVLYAQPSERSVMQAQS--LMLLLAAGDAVWVRMFQRD-RDNA
: : :. . : .. . . ......:. : ..: : :: ::: ..: . .
CCDS22 -EICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWV---EKDPKKGH
170 180 190 200 210 220
230 240 250
pF1KE0 IY-GEHGDLYITFSGHLVKPAAEL
:: : ..: .::: :. :.:
CCDS22 IYQGSEADS--VFSGFLIFPSA
230 240
>>CCDS227.1 C1QC gene_id:714|Hs108|chr1 (245 aa)
initn: 155 init1: 155 opt: 305 Z-score: 309.8 bits: 64.8 E(32554): 6.2e-11
Smith-Waterman score: 305; 30.4% identity (54.7% similar) in 247 aa overlap (6-248:15-244)
10 20 30 40 50
pF1KE0 MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSD-RDLWRG
:::: ::::. : : :. : : : .: : :
CCDS22 MDVGPSSLPHLGLKLLLLLLLLPLR---GQANTGCYGI--PGMPGLPGAPGKDGYDGLPG
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 DLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGA
.: : . :. ::.::: :. :. :..: :::: :. : : :. : :
CCDS22 P--KGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 ACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV
.. ..:.: :. . . . . :.. :.: .: .: ..:.: : :::.:.. ..
CCDS22 YKQKFQSVFTVTRQTHQPPAPN-SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHA
120 130 140 150 160 170
180 190 200 210 220
pF1KE0 -HTWNYKETYLHIMLNRRPAAVLY--AQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRD
:: : : ..: : . :. .. :. . ... ...: : .:. ::. . :
CCDS22 SHTAN-----LCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAV--NDYY
180 190 200 210 220
230 240 250
pF1KE0 NAIYGEHGDLYITFSGHLVKPAAEL
. . : .:. . ::: :. :
CCDS22 DMV-GIQGSDSV-FSGFLLFPD
230 240
>>CCDS3284.1 ADIPOQ gene_id:9370|Hs108|chr3 (244 aa)
initn: 205 init1: 151 opt: 302 Z-score: 306.9 bits: 64.3 E(32554): 9e-11
Smith-Waterman score: 302; 31.5% identity (63.0% similar) in 181 aa overlap (69-246:65-239)
40 50 60 70 80 90
pF1KE0 YARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGR
:::::. :. : : :. : :::.: .:
CCDS32 ACTGWMAGIPGHPGHNGAPGRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGF
40 50 60 70 80 90
100 110 120 130 140 150
pF1KE0 RGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVP--FDTELVNLDGAFDLAAGRF
: .:. : :: . .::::: :.. . .: : . : .. .: ..:.:
CCDS32 PGIQGRKGEPGEGAYVYRSAFSVG----LETYVTIPNMPIRFTKIFYNQQNHYDGSTGKF
100 110 120 130 140 150
160 170 180 190 200 210
pF1KE0 LCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQ-SLMLLLAAGD
:..::.:... .. .. .:.. . .. . . : : .: .: ::. :..: : .::
CCDS32 HCNIPGLYYFAYHITVY-MKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGD
160 170 180 190 200
220 230 240 250
pF1KE0 AVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKPAAEL
::.... . . :..:... : ::.: :.
CCDS32 QVWLQVYGEGERNGLYADN-DNDSTFTGFLLYHDTN
210 220 230 240
252 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 14:26:59 2016 done: Mon Nov 7 14:26:59 2016
Total Scan time: 2.610 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]