Result of FASTA (ccds) for
pFN21AB9863
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9863, 417 aa
1>>>pF1KB9863 417 - 417 aa - 417 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3789+/-0.00075; mu= 11.6039+/- 0.045
mean_var=204.9547+/-41.240, 0's: 0 Z-trim(117.0): 65 B-trim: 171 in 1/52
Lambda= 0.089587
statistics sampled from 17640 (17708) to 17640 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.834), E-opt: 0.2 (0.544), width: 16
Scan time: 3.830
The best scores are: opt bits E(32554)
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 2998 399.3 3.4e-111
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 2990 398.3 7.1e-111
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 2901 386.8 2e-107
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 2899 386.6 2.4e-107
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 2410 323.4 2.7e-88
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 1987 268.7 7.3e-72
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 766 111.0 2.7e-24
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 757 109.8 5.7e-24
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 685 100.5 3.7e-21
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 647 95.4 8.5e-20
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 608 90.4 3.1e-18
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 544 82.1 9.1e-16
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 531 80.6 4e-15
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 528 80.2 4.9e-15
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 524 79.5 5.3e-15
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 517 78.6 1e-14
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 509 77.6 2.2e-14
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 500 76.4 4.8e-14
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 499 76.3 5.5e-14
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 484 74.5 2.4e-13
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 484 74.5 2.4e-13
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 480 73.9 3.3e-13
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 476 73.4 4.6e-13
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 476 73.4 4.7e-13
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 469 72.5 9.3e-13
CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 464 71.8 1.3e-12
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 455 70.5 2.5e-12
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 454 70.5 3.1e-12
CCDS9636.1 FOXG1 gene_id:2290|Hs108|chr14 ( 489) 441 68.9 1.2e-11
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 2998 init1: 2998 opt: 2998 Z-score: 2109.7 bits: 399.3 E(32554): 3.4e-111
Smith-Waterman score: 2998; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
370 380 390 400 410
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 2990 init1: 2990 opt: 2990 Z-score: 2104.1 bits: 398.3 E(32554): 7.1e-111
Smith-Waterman score: 2990; 99.5% identity (100.0% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
370 380 390 400 410
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 2951 init1: 2740 opt: 2901 Z-score: 2041.9 bits: 386.8 E(32554): 2e-107
Smith-Waterman score: 2901; 97.4% identity (98.1% similar) in 417 aa overlap (1-417:1-416)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: : :::::::::::::
CCDS47 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS47 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::: :::::::::::::::::::::::::::::: :::::::::::
CCDS47 APPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS47 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
:::::.::::::::::: :::::::::::::: :::::::::::::::::::::: :
CCDS47 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR-TAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 2949 init1: 2738 opt: 2899 Z-score: 2040.5 bits: 386.6 E(32554): 2.4e-107
Smith-Waterman score: 2899; 97.4% identity (98.1% similar) in 417 aa overlap (1-417:1-416)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: : :::::::::::::
CCDS75 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS75 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::::::::::::::::::::: :::::::::::: :::::::::::
CCDS75 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS75 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
:::::.::::::::::: :::::::::::::: :::::::::::::::::::::: :
CCDS75 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR-TAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 2207 init1: 2207 opt: 2410 Z-score: 1698.7 bits: 323.4 E(32554): 2.7e-88
Smith-Waterman score: 2412; 87.4% identity (90.3% similar) in 404 aa overlap (1-395:1-400)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
CCDS34 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS34 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
:::.::::::::::::::: ::::::::::::::::::::::::::::::::::.:::::
CCDS34 ILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::::
CCDS34 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
:::::::::::::.::::::::::::: ::::::::.::::::::::: :::::::::::
CCDS34 APPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
::::::::::::::::::::::::::::: :::::::::::::.::::::::: ::::.:
CCDS34 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
300 310 320 330 340 350
370 380 390 400 410
pF1KB9 ACCI-----PRPLPLCCK--CPPPP--LLGQFCSNSSSIRRRTAPTAALPPRARCWAGTC
:: : : : : .:: : .:.. : :
CCDS34 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
360 370 380 390 400 410
pF1KB9 RPRRPC
CCDS34 EGTSPVFLVSPTPSSLAESAGPS
420 430
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 2044 init1: 1522 opt: 1987 Z-score: 1403.6 bits: 268.7 E(32554): 7.3e-72
Smith-Waterman score: 1987; 94.1% identity (96.7% similar) in 303 aa overlap (1-303:1-302)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: :::.:::::::::::
CCDS21 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS21 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS21 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
: ::::::::::::::::::::::::: ::::::::.::::::::::: ::::. .: .
CCDS21 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
: :
CCDS21 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
300 310 320 330 340 350
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 738 init1: 695 opt: 766 Z-score: 549.7 bits: 111.0 E(32554): 2.7e-24
Smith-Waterman score: 782; 51.3% identity (65.2% similar) in 279 aa overlap (32-297:61-322)
10 20 30 40 50 60
pF1KB9 NLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQV
:: . : .:::::... . : . .
CCDS30 GGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGA
40 50 60 70 80 90
70 80 90 100 110
pF1KB9 ARWGGVALP-REHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQP-AKPPYSYIALITM
: .: : .:..::. :. :: ..::. :.: .::::::::::::
CCDS30 AAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT---RSPLVKPPYSYIALITM
100 110 120 130
120 130 140 150 160 170
pF1KB9 AILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKG
::::.:.:::::: :: ::::::::::.:::::::::::::::::::::::::::.::::
CCDS30 AILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKG
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB9 NYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP---LPAAHAALHNPR---P
:::.::: : :::::::::::::::::. : : ::: : : .. :: .: :
CCDS30 NYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLP
200 210 220 230 240 250
240 250 260 270 280
pF1KB9 G-PLLGAPAPPQ----PVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGA
: :: . :. :: : :: :. :::: . . .: . : .. .
CCDS30 GFAAYGAYGYGYGLALPAYGAPP---PGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPG
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB9 ALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRP
:.: : :
CCDS30 RAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSP
320 330 340 350 360 370
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 759 init1: 659 opt: 757 Z-score: 543.8 bits: 109.8 E(32554): 5.7e-24
Smith-Waterman score: 792; 42.3% identity (58.7% similar) in 404 aa overlap (14-400:53-422)
10 20 30 40
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEE
.: :. ::: ... : ::::.:..
CCDS75 GEGEDEEDEEEEDDDEGGGGGPRLAVPAQRRRRRRSYAGED-ELEDLEEEEDDDDILLAP
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB9 EAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDA
:... :: : .:.. :::: . . :. :. :
CCDS75 PAGGSP-----APPGPAPAAGAGAG-------GGGGGGGAGGGGS----------AGSGA
90 100 110
110 120 130 140 150 160
pF1KB9 RQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSL
..: .::::::::::::::::.:.:::::: :: ::::::::::.:::::::::::::::
CCDS75 KNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 NDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP-GAHLPHPFPL
::::::::::::.:::::::.::: : :::::::::::::::::. : : .: . . :
CCDS75 NDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLL
180 190 200 210 220 230
230 240 250 260 270
pF1KB9 PAAHAA--LHNPRPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYA
.: :: .: . : :::: : : :: : ::. . : . ..:
CCDS75 RGAGAAGGAGDPAAAAALFPPAPPPP-PHAY-----GYGPYGCGYGLQLPPYAPPSALFA
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB9 GAPKKAEGAALATPAPFPCCSPHLVLS-LGRRARVWRRHREADASLSALRV-LCKGSGER
.: : .::. .: : :: . . :.: : .: : . : . : . :..:
CCDS75 AAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPG
300 310 320 330 340 350
340 350 360 370 380
pF1KB9 VQGLRR-------ICPRPRGATATCSSDHQACCI----PRPLPLCCKCPPPPLLGQFCSN
...: : : : .:. .. :: : : :. : : : :.
CCDS75 ASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAP-PAPGSSGGGCAA
360 370 380 390 400 410
390 400 410
pF1KB9 SSSIRRRTAPTAALPPRARCWAGTCRPRRPC
.... .:.:::
CCDS75 QAAV----GPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTARISNC
420 430 440 450 460
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 734 init1: 666 opt: 685 Z-score: 493.3 bits: 100.5 E(32554): 3.7e-21
Smith-Waterman score: 700; 48.5% identity (60.5% similar) in 299 aa overlap (18-303:38-314)
10 20 30 40
pF1KB9 MNLPRAERLRSTPQRSLRDSD-GED---GKIDVLGEEEDEDEVEDEE
.::: : : : .. .: :: .
CCDS62 SASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPH
10 20 30 40 50 60
50 60 70 80 90
pF1KB9 EAASQQFLEQSLQ-P----GLQVARWGGVALPR-EHIEGGGGPSDPSEFGTKFRAPPRSA
.. : .: : : : .. : :. :. . .:: : . . : : ::
CCDS62 HGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB9 ---AASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
: :. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS62 GGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAH
::::::::::::::::::::.:::::::.::: :.::::::::::::::::::: :
CCDS62 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---H
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 LPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLS
: ..:: : : : :: ..: :::.: :: :
CCDS62 L-------REQTALMMQSFGAYSLAAAA-----GA---AGPYGRPYGL-HPAAAAGAY-S
250 260 270 280
280 290 300 310 320 330
pF1KB9 APVYAGAPKKAEGAALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGS
: :.: : .::: : .: .: :
CCDS62 HP--AAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQL
290 300 310 320 330 340
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 592 init1: 552 opt: 647 Z-score: 468.9 bits: 95.4 E(32554): 8.5e-20
Smith-Waterman score: 647; 48.8% identity (62.3% similar) in 252 aa overlap (57-300:17-254)
30 40 50 60 70 80
pF1KB9 IDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ-VARWGGVALPREHIEGGGGPSDPSE
:.: :: : : : : : . .
CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAA
10 20 30 40
90 100 110 120 130 140
pF1KB9 FGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRF
: :: . . .. :.: .::::::::::.::. . : .::::..: ::. ::
CCDS55 -GRGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERF
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB9 PYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRK
.:: . :::::::::.:::::::.:::::.:::::::.::::. :::::::::::::
CCDS55 AFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRK
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB9 RFKRHQLTP-GAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTAPGRRPYA
:::: .: .: : : ::: .: . : ::: : .: ::. :: : :.:
CCDS55 RFKRAELPAHAAAAPGP-PLPFPYAP-YAPAPGPALLVP-PPSAGPGPSP---PAR----
170 180 190 200 210
270 280 290 300 310
pF1KB9 LLHPHPLRYLLLSAPVYAG--APKKAEGAAL-ATPAPFPCCSPHLVLSLGRRARVWRRHR
:. : : : :: ::. :: :. : :: :.
CCDS55 LFSVDSLVNL---QPELAGLGAPEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLP
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB9 EADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQACCIPRPLPLCCKCPPPP
CCDS55 ATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL
280 290 300 310
417 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:34:21 2016 done: Sun Nov 6 04:34:21 2016
Total Scan time: 3.830 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]