Result of FASTA (ccds) for
pFN21AB9862
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9862, 416 aa
1>>>pF1KB9862 416 - 416 aa - 416 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3815+/-0.000755; mu= 11.5390+/- 0.046
mean_var=206.2035+/-40.833, 0's: 0 Z-trim(116.9): 65 B-trim: 0 in 0/53
Lambda= 0.089315
statistics sampled from 17512 (17577) to 17512 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.832), E-opt: 0.2 (0.54), width: 16
Scan time: 2.600
The best scores are: opt bits E(32554)
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 2993 397.6 1.2e-110
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 2972 394.9 7.7e-110
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 2910 386.9 2e-107
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 2899 385.5 5.2e-107
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 2380 318.6 7.3e-87
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 1992 268.6 7.9e-72
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 771 111.3 2.1e-24
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 741 107.4 2.9e-23
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 683 100.0 5.2e-21
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 638 94.0 2.2e-19
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 617 91.3 1.6e-18
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 539 81.3 1.6e-15
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 540 81.6 1.9e-15
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 535 81.0 3.1e-15
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 524 79.3 5.9e-15
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 519 78.7 9.3e-15
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 505 76.9 3.6e-14
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 500 76.3 5.6e-14
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 486 74.4 1.9e-13
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 480 73.8 3.7e-13
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 478 73.5 4.3e-13
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 476 73.2 5.1e-13
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 470 72.5 9.2e-13
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 470 72.5 9.3e-13
CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 468 72.2 1e-12
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 469 72.4 1e-12
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 455 70.4 2.8e-12
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 455 70.5 3.1e-12
CCDS9636.1 FOXG1 gene_id:2290|Hs108|chr14 ( 489) 448 69.7 6.9e-12
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 2993 init1: 2993 opt: 2993 Z-score: 2100.1 bits: 397.6 E(32554): 1.2e-110
Smith-Waterman score: 2993; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:1-416)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 2972 init1: 2972 opt: 2972 Z-score: 2085.4 bits: 394.9 E(32554): 7.7e-110
Smith-Waterman score: 2972; 99.5% identity (99.5% similar) in 416 aa overlap (1-416:1-416)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::: ::::::::::::::::: ::::::::::::::::::::::::
CCDS47 APPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 2960 init1: 2749 opt: 2910 Z-score: 2042.2 bits: 386.9 E(32554): 2e-107
Smith-Waterman score: 2910; 97.8% identity (98.1% similar) in 417 aa overlap (1-416:1-417)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: : :::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::::::::::::::::::::: :::::::::::: :::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR-TAPTAALPPRARCWAGTCRPRRRC
:::::.::::::::::: :::::::::::::: :::::::::::::::::::::: :
CCDS43 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
370 380 390 400 410
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 2949 init1: 2738 opt: 2899 Z-score: 2034.6 bits: 385.5 E(32554): 5.2e-107
Smith-Waterman score: 2899; 97.4% identity (98.1% similar) in 417 aa overlap (1-416:1-417)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: : :::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::::::::::::::::::::: :::::::::::: :::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR-TAPTAALPPRARCWAGTCRPRRRC
:::::.::::::::::: :::::::::::::: :::::::::::::::::::::: :
CCDS43 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
370 380 390 400 410
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 2186 init1: 2186 opt: 2380 Z-score: 1672.9 bits: 318.6 E(32554): 7.3e-87
Smith-Waterman score: 2380; 93.9% identity (96.1% similar) in 362 aa overlap (1-362:1-358)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
:::::::: :::::::::::::::::::::::::: ::::: : :::::::::::::
CCDS34 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEED----EDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS34 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
:::.::::::::::::::: ::::::::::::::::::::::::::::::::::.:::::
CCDS34 ILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::.::::::::
CCDS34 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
:::::::::::::.::::::::::::: ::::::: .:::::::::::::::::::::::
CCDS34 APPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::: ::::::::::::::::::::::: ::::.:
CCDS34 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
300 310 320 330 340 350
370 380 390 400 410
pF1KB9 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
::
CCDS34 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
360 370 380 390 400 410
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 2051 init1: 1512 opt: 1992 Z-score: 1403.1 bits: 268.6 E(32554): 7.9e-72
Smith-Waterman score: 1992; 94.1% identity (97.0% similar) in 303 aa overlap (1-303:1-302)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::::
CCDS21 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS21 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS21 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS21 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
: ::::::::::::::::::::::::: ::::::: .::::::::::::::::. .: .
CCDS21 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
: :
CCDS21 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
300 310 320 330 340 350
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 814 init1: 701 opt: 771 Z-score: 551.8 bits: 111.3 E(32554): 2.1e-24
Smith-Waterman score: 778; 48.7% identity (62.4% similar) in 306 aa overlap (7-297:38-322)
10 20 30
pF1KB9 MNLPRAERPRSTPQRSLRD--SDGEDGKIDVLGEEE
: : . :. :: :.. .::
CCDS30 CEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPP----AEEA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 DEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTKFRAP
. : .::::: . . : . .: .: : .:..::. :. :
CCDS30 EADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------P
70 80 90 100 110
100 110 120 130 140 150
pF1KB9 PRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAW
: ..::. :.: .::::::::::::::::.:.:::::: :: ::::::::::.:::::
CCDS30 PSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAW
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 QNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPG
::::::::::::::::::::::.:::::::.::: : :::::::::::::::::. : :
CCDS30 QNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPP
180 190 200 210 220 230
220 230 240 250 260
pF1KB9 AHLPHPFP---LPAAHAALHNPH---PG-PLLGAPAPPQ----PVPGAYPNTAPGRRPYA
::: : : .. :: .: :: :: . :. :: : :: :.
CCDS30 HPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPHP
240 250 260 270 280
270 280 290 300 310 320
pF1KB9 LLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREAD
:::: . . .: . : .. . :.: : :
CCDS30 --HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPG
290 300 310 320 330 340
330 340 350 360 370 380
pF1KB9 ASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLG
CCDS30 PGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGA
350 360 370 380 390 400
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 762 init1: 660 opt: 741 Z-score: 531.2 bits: 107.4 E(32554): 2.9e-23
Smith-Waterman score: 782; 43.0% identity (59.1% similar) in 381 aa overlap (36-399:62-422)
10 20 30 40 50 60
pF1KB9 AERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQVARWG
:::.:: ::: .. . . : . : :
CCDS75 EEEDDDEGGGGGPRLAVPAQRRRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPG
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB9 GVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQP-AKPPYSYIALITMAILQN
. :::: . . :. :. :..: .::::::::::::::::.
CCDS75 PAPAAGAGAGGGGGGGGAGGGGS----------AGSGAKNPLVKPPYSYIALITMAILQS
100 110 120 130 140
130 140 150 160 170 180
pF1KB9 PHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSL
:.:::::: :: ::::::::::.:::::::::::::::::::::::::::.:::::::.:
CCDS75 PKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL
150 160 170 180 190 200
190 200 210 220 230 240
pF1KB9 DPASQDMFDNGSFLRRRKRFKRHQLTP-GAHLPHPFPLPAAHAA--LHNPHPGPLLGAPA
:: : :::::::::::::::::. : : .: . . : .: :: .: . : ::
CCDS75 DPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPA
210 220 230 240 250 260
250 260 270 280 290 300
pF1KB9 PPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSP
:: : : :: : ::. . : . ..:.: : .: . .: : :
CCDS75 PPPP-PHAY-----GYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPP
270 280 290 300 310
310 320 330 340 350
pF1KB9 HLVLS-LGRRARVWRRHREADASLSALRV-LCKGSGERVQGLRR-------VCPRPRGAT
: . . :.: : .: : . : . : . :..: ...: : . : .
CCDS75 HGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPA
320 330 340 350 360 370
360 370 380 390 400
pF1KB9 ATCSSDHQACCI----PKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAG
:. .. :: :.: :. : : : :. .... .:.:::
CCDS75 AAAAAAAQAAAAAQASPSPSPVAAP-PAPGSSGGGCAAQAAV---GPAAALTRSLVAAAA
380 390 400 410 420 430
410
pF1KB9 TCRPRRRC
CCDS75 AAASSVSSSAALGTLHQGTALSSVENFTARISNC
440 450 460
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 724 init1: 666 opt: 683 Z-score: 490.7 bits: 100.0 E(32554): 5.2e-21
Smith-Waterman score: 693; 54.7% identity (64.9% similar) in 225 aa overlap (65-265:106-322)
40 50 60 70 80 90
pF1KB9 DEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPP
:::. .: .::::. : :. :
CCDS62 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVG-GEEGGASGGGPGAGS--GSAGGLAP
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB9 RSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
:. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS62 -----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
140 150 160 170 180
160 170 180 190 200
pF1KB9 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQL-----
::::::::::::::::::::.:::::::.::: :.:::::::::::::::::::
CCDS62 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE
190 200 210 220 230 240
210 220 230 240 250
pF1KB9 ----------------TPGAHLPH--PFPLPAAHAALHNPHPGPLLGAPAPPQ-PVPGAY
. :: :. :. : : :: ::. .: : : :
CCDS62 QTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB9 PNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRR
: .:: : . : :
CCDS62 PPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL
310 320 330 340 350 360
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 592 init1: 552 opt: 638 Z-score: 461.4 bits: 94.0 E(32554): 2.2e-19
Smith-Waterman score: 643; 47.0% identity (61.8% similar) in 249 aa overlap (57-300:17-241)
30 40 50 60 70 80
pF1KB9 IDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ-VARWGGVALPREHIEGGGGPSDPSE
:.: :: : : : : : . .
CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAA
10 20 30 40
90 100 110 120 130 140
pF1KB9 FGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRF
: :: . . .. :.: .::::::::::.::. . : .::::..: ::. ::
CCDS55 -GRGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERF
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB9 PYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRK
.:: . :::::::::.:::::::.:::::.:::::::.::::. :::::::::::::
CCDS55 AFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRK
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB9 RFKRHQLTP-GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYA
:::: .: .: : : ::: .: . : ::: : .: ::. :: :
CCDS55 RFKRAELPAHAAAAPGP-PLPFPYAP-YAPAPGPALLVP-PPSAGPGPSP----------
170 180 190 200 210
270 280 290 300 310 320
pF1KB9 LLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREAD
: : . ... : . : : :..: : :::.
CCDS55 -----PARLFSVDSLVNL----QPELAGLGAPEP-PCCAAPDAAAAAFPPCAAAASPPLY
220 230 240 250 260
330 340 350 360 370 380
pF1KB9 ASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLG
CCDS55 SQVPDRLVLPATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL
270 280 290 300 310
416 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 18:22:04 2016 done: Mon Nov 7 18:22:04 2016
Total Scan time: 2.600 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]