Result of FASTA (ccds) for
pFN21AB9861
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9861, 408 aa
1>>>pF1KB9861 408 - 408 aa - 408 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9127+/-0.000815; mu= 3.0332+/- 0.049
mean_var=239.5782+/-49.333, 0's: 0 Z-trim(116.4): 72 B-trim: 168 in 1/51
Lambda= 0.082861
statistics sampled from 16938 (17010) to 16938 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.822), E-opt: 0.2 (0.523), width: 16
Scan time: 3.560
The best scores are: opt bits E(32554)
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 2847 352.7 3.7e-97
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 1994 250.7 1.8e-66
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 1992 250.5 2.2e-66
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 1987 249.9 3.3e-66
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 1980 249.1 5.9e-66
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 1935 243.7 2.6e-64
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 795 107.5 3e-23
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 754 102.5 8.4e-22
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 700 96.1 7.5e-20
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 635 88.2 1.2e-17
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 607 84.9 1.4e-16
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 569 80.3 3.1e-15
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 570 80.6 4e-15
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 558 79.1 1e-14
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 552 78.3 1.2e-14
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 530 75.7 8.3e-14
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 512 73.6 4.3e-13
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 512 73.6 4.3e-13
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 507 72.9 5e-13
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 501 72.2 8.7e-13
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 500 72.2 1.1e-12
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 496 71.6 1.4e-12
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 492 71.2 2.1e-12
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 479 69.6 6.2e-12
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 470 68.6 1.4e-11
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 466 68.0 1.7e-11
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 446 65.6 7.7e-11
CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 445 65.5 1e-10
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 2847 init1: 2847 opt: 2847 Z-score: 1857.8 bits: 352.7 E(32554): 3.7e-97
Smith-Waterman score: 2847; 100.0% identity (100.0% similar) in 408 aa overlap (1-408:1-408)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 VARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 LQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 WSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 WSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 LPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 SLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSS
310 320 330 340 350 360
370 380 390 400
pF1KB9 LSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 LSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL
370 380 390 400
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 2053 init1: 1514 opt: 1994 Z-score: 1306.6 bits: 250.7 E(32554): 1.8e-66
Smith-Waterman score: 1994; 94.1% identity (97.0% similar) in 303 aa overlap (1-302:1-303)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::::
CCDS47 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS47 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS47 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS47 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
: ::::::::::::::: ::::::::: ::::::::.::::::::::::::::. .: .
CCDS47 APPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
: :
CCDS47 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 2051 init1: 1512 opt: 1992 Z-score: 1305.3 bits: 250.5 E(32554): 2.2e-66
Smith-Waterman score: 1992; 94.1% identity (97.0% similar) in 303 aa overlap (1-302:1-303)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::::
CCDS75 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS75 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS75 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS75 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
: ::::::::::::::::::::::::: ::::::: .::::::::::::::::. .: .
CCDS75 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
: :
CCDS75 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 2044 init1: 1522 opt: 1987 Z-score: 1302.1 bits: 249.9 E(32554): 3.3e-66
Smith-Waterman score: 1987; 94.1% identity (96.7% similar) in 303 aa overlap (1-302:1-303)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: :::.:::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
: ::::::::::::::::::::::::: ::::::::.::::::::::: ::::. .: .
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
: :
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
310 320 330 340 350 360
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 2039 init1: 1515 opt: 1980 Z-score: 1297.6 bits: 249.1 E(32554): 5.9e-66
Smith-Waterman score: 1980; 93.7% identity (96.7% similar) in 303 aa overlap (1-302:1-303)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: :::.:::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
: ::::::::::::::::::::::::: ::::::::.::::::::::: ::::. .: .
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
: :
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 1819 init1: 1513 opt: 1935 Z-score: 1268.2 bits: 243.7 E(32554): 2.6e-64
Smith-Waterman score: 1935; 92.4% identity (95.0% similar) in 303 aa overlap (1-302:1-299)
10 20 30 40 50 60
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
:::::::: :::::::::::::::::::::::::::: ::: :::.:::::::::::
CCDS34 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDED----EEEAASQQFLEQSLQPGLQ
10 20 30 40 50
70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: ::::::::::::::::::::::::::::::: :::::::::
CCDS34 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
::::::::::::::::::: ::::::::::::::::::::::::::::::::::.::::.
CCDS34 ILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
::::::::::::::::::::::::.::: :::::::::::::::::::::::::::::::
CCDS34 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
: :::::::::::.:::::::::::::::::::::::::::::::::::::::. .: .
CCDS34 APPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
: :
CCDS34 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
300 310 320 330 340 350
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 798 init1: 692 opt: 795 Z-score: 531.0 bits: 107.5 E(32554): 3e-23
Smith-Waterman score: 817; 41.4% identity (57.7% similar) in 449 aa overlap (3-406:39-448)
10 20
pF1KB9 MNLPRAERPRSTPQRSL---RDSDGEDGKIDV
:: ::. :. : .. .:... :.
CCDS30 EIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRA-PRDVLPHGHEPPAEEAEADL
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB9 LGEEEDEDEVEDEEEEA--SQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGT
.::. : : .: :. . .:: .: :.: : ::
CCDS30 AEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGP-------GP--------
70 80 90 100 110
90 100 110 120 130 140
pF1KB9 EFRAPPRSAAASEDARQP-AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRR
.:: ..::. :.: .::::::::::::::::::.:::::: :: ::::::::::.
CCDS30 ---GPPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYRE
120 130 140 150 160
150 160 170 180 190 200
pF1KB9 KFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRH
:::::::::::::::::::::::::::.::::.::.::: : :::::::::::::::::.
CCDS30 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQ
170 180 190 200 210 220
210 220 230 240 250
pF1KB9 QLTPGAHLPHPFP---LPAAHAALHNPR---PG-PLLGAPA----LPQPVPGAYPNTAPG
: : ::: : : .. :: .: :: :: . : :. :: : ::
CCDS30 PLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PG
230 240 250 260 270 280
260 270 280 290 300
pF1KB9 RRPYALLHPHPPRYLLLSA-----------PAYAGAPKKAE--GADLATPGTLPVLQPSL
:. :::: . . .: :. :.:: . .. .: :. :. :.
CCDS30 PAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPAS
290 300 310 320 330 340
310 320 330 340 350
pF1KB9 GPQPWEEGKGLASPPGG--GCI-SFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
: : :: . :. :: .: :. . :...: ::: ::..
CCDS30 GSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGL-----PTA-----LLRQ--
350 360 370 380
360 370 380 390 400
pF1KB9 SLSDNFAATAAASGGGLRQR-------LRSHQGRGA-----GRAPVGRVGAAAVSGGGRG
.:. . .. :...:.: :: . .: : :: :.. : :::.. ::.
CCDS30 GLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQA
390 400 410 420 430 440
pF1KB9 L
CCDS30 QVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
450 460 470 480 490
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 753 init1: 654 opt: 754 Z-score: 504.9 bits: 102.5 E(32554): 8.4e-22
Smith-Waterman score: 801; 42.9% identity (59.7% similar) in 427 aa overlap (4-402:44-436)
10 20 30
pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEE
:: : . .: :. ::: ... : ::
CCDS75 AEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQR-RRRRRSYAGED-ELEDLEEE
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB9 EDEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPP
::.:.. .. . :: : .:. ::: . . :
CCDS75 EDDDDILLAPPAGG-----SPAPPGPAPAAGAGA--------GGGGGGGGAGG-------
80 90 100 110
100 110 120 130 140 150
pF1KB9 RSAAASEDARQP-AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQ
...:. :..: .::::::::::::::::::.:::::: :: ::::::::::.::::::
CCDS75 -GGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQ
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 NSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP-G
:::::::::::::::::::::.::::.::.::: : :::::::::::::::::. : : .
CCDS75 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPN
180 190 200 210 220 230
220 230 240 250 260
pF1KB9 AHLPHPFPLPAAHAA--LHNPRPGPLLGAPALPQPVPGAYPNTAPGRRPYAL-LHPH-PP
: . . : .: :: .: . : :: : : : :: . .: :.: : :. ::
CCDS75 AAAAESLLLRGAGAAGGAGDPAAAAALFPPA-PPPPPHAY-GYGPYGCGYGLQLPPYAPP
240 250 260 270 280
270 280 290 300
pF1KB9 RYLLLSAPAYAGA------------PKKAEGADLAT------PGTLPVLQPSLGPQPWEE
:. .: : :.: : .. .:.:: : : . : :: :
CCDS75 SALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALP--GPLPASA
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB9 GKGLASPPGGGCIS---FSIESIMQGVRG-AGTGAAQSLSPTAWSYCPLLQRPSSLSDNF
.: :. ::.. .. ::::::. : : :...:: . . .: . : :: ..
CCDS75 AK--AGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASP---SPSPVAAPP
350 360 370 380 390 400
370 380 390 400
pF1KB9 AATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL
: ..:::: . . . :. :. ..::: :
CCDS75 AP--GSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFT
410 420 430 440 450
CCDS75 ARISNC
460
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 787 init1: 660 opt: 700 Z-score: 469.8 bits: 96.1 E(32554): 7.5e-20
Smith-Waterman score: 750; 45.5% identity (61.7% similar) in 347 aa overlap (65-405:106-410)
40 50 60 70 80 90
pF1KB9 DEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPR
:::. . ::::. : :. :
CCDS62 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGS--GSAGGLAP-
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB9 SAAASEDARQPAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNS
:. . .::::::::::::::::::.:.::::::: :::.::::::.::::::::
CCDS62 ----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNS
140 150 160 170 180
160 170 180 190 200 210
pF1KB9 IRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHL
:::::::::::::::::::.::::.::.::: :.::::::::::::::::::: ::
CCDS62 IRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQ---EHL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 PHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSA
..:: .:: .: . .: .: :::.: :: :
CCDS62 -------REQTALMMQS----FGAYSLAAAAGAA----GPYGRPYGL-HPAAAAGAY-SH
250 260 270 280
280 290 300 310 320
pF1KB9 PAYAGAPKKAEGADL--ATPGTLPVLQPSLGPQP-WEEGKGLA---SPPGGGCISFSIES
:: :.: : . . : : . ::: :.. : : :. : : : : ......:
CCDS62 PAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPG-LQLQLNS
290 300 310 320 330 340
330 340 350 360 370 380
pF1KB9 IMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGA
. .. .:::..: . . . . : ::: .:. . . :. :: .. ::
CCDS62 LGAAAAAAGTAGAAGTTASLIKSEPS-ARPSFSIENIIGGGPAAPGG--------SAVGA
350 360 370 380 390
390 400
pF1KB9 GRAPVGRVGAAAVSGGGRGL
: : :... ::::
CCDS62 GVA-----GGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLS
400 410 420 430 440 450
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 626 init1: 547 opt: 635 Z-score: 430.2 bits: 88.2 E(32554): 1.2e-17
Smith-Waterman score: 653; 45.0% identity (61.5% similar) in 278 aa overlap (57-316:17-292)
30 40 50 60 70 80
pF1KB9 IDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ-VARWGGVALPREHIEGGGPSDPSEF
:.: :: : : : : . .
CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAA
10 20 30 40
90 100 110 120 130 140
pF1KB9 GTEFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFP
: :: . . .. :.: .::::::::::.::. ..: .::::..: ::. ::
CCDS55 GRGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFA
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB9 YYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKR
.:: . :::::::::.:::::::.:::::.::::.::.::::. ::::::::::::::
CCDS55 FYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKR
110 120 130 140 150 160
210 220 230 240 250
pF1KB9 FKRHQLTP-GAHLPHPFPLPAAHAALHNPRPGPLLGAP---ALPQPVPGAY---PNTAPG
::: .: .: : : ::: .: . : ::: : .: : : : : : .. .
CCDS55 FKRAELPAHAAAAPGP-PLPFPYAP-YAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVN
170 180 190 200 210 220
260 270 280 290 300
pF1KB9 RRPY--ALLHPHPPRYLLLSAPAYAGAPKKAEGAD---LATPG--TLPVLQPSLGPQPWE
.: .: :.:: .: : : : : .. .: .::. .:. :: : :
CCDS55 LQPELAGLGAPEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 EGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAAT
.::.:
CCDS55 PLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL
290 300 310
408 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:17:43 2016 done: Sun Nov 6 18:17:44 2016
Total Scan time: 3.560 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]