Result of FASTA (ccds) for
pFN21AB9768
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9768, 1006 aa
1>>>pF1KB9768 1006 - 1006 aa - 1006 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 15.8093+/-0.00118; mu= -21.2325+/- 0.071
mean_var=900.8792+/-203.004, 0's: 0 Z-trim(118.4): 29 B-trim: 0 in 0/55
Lambda= 0.042731
statistics sampled from 19363 (19391) to 19363 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.818), E-opt: 0.2 (0.596), width: 16
Scan time: 4.710
The best scores are: opt bits E(32554)
CCDS32502.1 ZFPM1 gene_id:161882|Hs108|chr16 (1006) 7127 455.5 2.6e-127
CCDS47908.1 ZFPM2 gene_id:23414|Hs108|chr8 (1151) 894 71.3 1.3e-11
>>CCDS32502.1 ZFPM1 gene_id:161882|Hs108|chr16 (1006 aa)
initn: 7127 init1: 7127 opt: 7127 Z-score: 2399.2 bits: 455.5 E(32554): 2.6e-127
Smith-Waterman score: 7127; 100.0% identity (100.0% similar) in 1006 aa overlap (1-1006:1-1006)
10 20 30 40 50 60
pF1KB9 MSRRKQSNPRQIKRSLGDMEAREEVQLVGASHMEQKATAPEAPSPPSADVNSPPPLPPPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MSRRKQSNPRQIKRSLGDMEAREEVQLVGASHMEQKATAPEAPSPPSADVNSPPPLPPPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SPGGPKELEGQEPEPRPTEEEPGSPWSGPDELEPVVQDGQRRIRARLSLATGLSWGPFHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SPGGPKELEGQEPEPRPTEEEPGSPWSGPDELEPVVQDGQRRIRARLSLATGLSWGPFHG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SVQTRASSPRQAEPSPALTLLLVDEACWLRTLPQALTEAEANTEIHRKDDALWCRVTKPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SVQTRASSPRQAEPSPALTLLLVDEACWLRTLPQALTEAEANTEIHRKDDALWCRVTKPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PAGGLLSVLLTAEPHSTPGHPVKKEPAEPTCPAPAHDLQLLPQQAGMASILATAVINKDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PAGGLLSVLLTAEPHSTPGHPVKKEPAEPTCPAPAHDLQLLPQQAGMASILATAVINKDV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 FPCKDCGIWYRSERNLQAHLLYYCASRQGTGSPAAAATDEKPKETYPNERVCPFPQCRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FPCKDCGIWYRSERNLQAHLLYYCASRQGTGSPAAAATDEKPKETYPNERVCPFPQCRKS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 CPSASSLEIHMRSHSGERPFVCLICLSAFTTKANCERHLKVHTDTLSGVCHSCGFISTTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 CPSASSLEIHMRSHSGERPFVCLICLSAFTTKANCERHLKVHTDTLSGVCHSCGFISTTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 DILYSHLVTNHMVCQPGSKGEIYSPGAGHPATKLPPDSLGSFQQQHTALQGPLASADLGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DILYSHLVTNHMVCQPGSKGEIYSPGAGHPATKLPPDSLGSFQQQHTALQGPLASADLGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 APTPSPGLDRKALAEATNGEARAEPLAQNGGSSEPPAAPRSIKVEAVEEPEAAPILGPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 APTPSPGLDRKALAEATNGEARAEPLAQNGGSSEPPAAPRSIKVEAVEEPEAAPILGPGE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 PGPQAPSRTPSPRSPAPARVKAELSSPTPGSSPVPGELGLAGALFLPQYVFGPDAAPPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PGPQAPSRTPSPRSPAPARVKAELSSPTPGSSPVPGELGLAGALFLPQYVFGPDAAPPAS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 EILAKMSELVHSRLQQGAGAGAGGAQTGLFPGAPKGATCFECEITFSNVNNYYVHKRLYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EILAKMSELVHSRLQQGAGAGAGGAQTGLFPGAPKGATCFECEITFSNVNNYYVHKRLYC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 SGRRAPEDAPAARRPKAPPGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPEDGAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGRRAPEDAPAARRPKAPPGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPEDGAGG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 RGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASRHDPPPRRPAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASRHDPPPRRPAAP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 PGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGPG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 LAPARSPGPAADGPIDLSKKPRRPLPGAPAPALADYHECTACRVSFHSLEAYLAHKKYSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LAPARSPGPAADGPIDLSKKPRRPLPGAPAPALADYHECTACRVSFHSLEAYLAHKKYSC
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 PAAPPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PAAPPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGP
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 SPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQTP
910 920 930 940 950 960
970 980 990 1000
pF1KB9 SKGTPAPLPNGNHRYCRLCNIKFSSLSTFIAHKKYYCSSHAAEHVK
::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SKGTPAPLPNGNHRYCRLCNIKFSSLSTFIAHKKYYCSSHAAEHVK
970 980 990 1000
>>CCDS47908.1 ZFPM2 gene_id:23414|Hs108|chr8 (1151 aa)
initn: 1318 init1: 337 opt: 894 Z-score: 321.8 bits: 71.3 E(32554): 1.3e-11
Smith-Waterman score: 1370; 33.5% identity (54.3% similar) in 944 aa overlap (1-841:1-878)
10 20 30 40 50
pF1KB9 MSRRKQSNPRQIKRSLGD-MEAREEVQLVGASHMEQKATAP--EAPSPPSADVN-SPPPL
:::::::.:::::: : : .: .:: . . .:. : :. : . : : .
CCDS47 MSRRKQSKPRQIKRPLEDAIEDEEEECPSEETDIISKGDFPLEESFSTEFGPENLSCEEV
10 20 30 40 50 60
60 70 80 90 100
pF1KB9 PPPTSPGGPKEL-EGQEPEPRPTEEEPGSP------WSGPDELEPVVQDGQRRIRARLSL
. : . . : : . :.::.: :.:: ::: .::.:.:..: .:
CCDS47 EYFCNKGDDEGIQETAESDGDTQSEKPGQPGVETDDWDGPGELEVFQKDGERKIQSRQQL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 ATGLSWGPFHGSVQTRASSPRQAEPSPALTLLLVDEACWLRTLP-QALTEAEANTEIHRK
.: .:::: :... .: . : ..:. :: . :.. . . : .. :
CCDS47 PVGTTWGPFPGKMDLNNNSLKTKAQVP---MVLTAGPKWLLDVTWQGVEDNKNNCIVYSK
130 140 150 160 170
170 180 190 200 210 220
pF1KB9 DDALWCRVTKPVPAGGLLSVLLTAEPHSTPGHPVKKEPAEPTCPAPAHD-LQLLPQQAGM
::: .:: . : : . .... : . .: :: : .:::::::.:
CCDS47 GGQLWCTTTKAISEGEEL-IAFVVDFDSRLQAASQMTLTEGMYPARLLDSIQLLPQQAAM
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 ASILATAVINKDVFPCKDCGIWYRSERNLQAHLLYYCASRQGTGSPAAAATDEKPKETYP
:::: ::..:::.::::.:::::::::::::::.:::..:: :: ...:. ..
CCDS47 ASILPTAIVNKDIFPCKSCGIWYRSERNLQAHLMYYCSGRQ---REAAPVSEENEDSAHQ
240 250 260 270 280 290
290 300 310 320 330
pF1KB9 NERVCPFPQCRKSCPSASSLEIHMRSHSGER--PFV-------CLICLSAFTTKANCERH
.:::::: :: .: .::.:. :::: . :. : .: . . : ..:
CCDS47 ISSLCPFPQCTKSFSNARALEMHLNSHSGVKMEEFLPPGASLKCTVCSYTADSVINFHQH
300 310 320 330 340 350
340 350 360 370 380 390
pF1KB9 LKVHTDTLSGVCHSCGF-ISTTRDILYSHLVTNHMVCQPGSKGEIYSPGAGHPATKLPPD
: : . :. : : ..: :..: .:. :.. :.. ::: .
CCDS47 LFSHLTQAAFRCNHCHFGFQTQRELL------QHQ--------ELHVPSG-----KLPRE
360 370 380 390
400 410 420 430 440 450
pF1KB9 SLGSFQQQHTALQGPLASADLGLAPTPSPGLDRKALAEATNGEARAEPLAQNGGSSEPPA
: ...:. : :. : .: : ::. .:.: : :. . .
CCDS47 S----DMEHS----PSATED-SLQP-------------ATDLLTRSE-LPQSQKAMQTKD
400 410 420 430
460 470 480 490 500 510
pF1KB9 APRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSPAPARVKAELSSPTPGSSPVPGE
: . ... :. .. .: .: : : : . .: . ...:.: ::: .:::: .
CCDS47 ASSDTELDKCEK-KTQLFLTNQRPEIQ-P--TTNKQSFSYTKIKSEPSSPRLASSPVQPN
440 450 460 470 480
520 530 540 550 560 570
pF1KB9 LGLAGAL--FLPQYVFGPDAA--PPASEILAKMSELVHSRLQQGAGAGAGGAQTGLFPGA
.: . . :: :. : : . : ::::::::::::: ::..:... . :
CCDS47 IGPSFPVGPFLSQFSFPQDITMVPQASEILAKMSELVHRRLRHGSSSYPPVIYS---PLM
490 500 510 520 530 540
580 590 600 610 620
pF1KB9 PKGATCFECEITFSNVNNYYVHKRLYCSGR-----RAPE-DAPAARRPKA-PPGPARA--
:::::::::.:::.:..:: :::. :::.: ..:: . . . :.: :. ...
CCDS47 PKGATCFECNITFNNLDNYLVHKKHYCSSRWQQMAKSPEFPSVSEKMPEALSPNTGQTSI
550 560 570 580 590 600
630 640 650
pF1KB9 ----PPGQPAEPDAP-------RSSP-----GPGAR---------EEGAGGAATPEDGAG
: .. :.:. : :: ::... . . ... .: .
CCDS47 NLLNPAAHSADPENPLLQTSCINSSTVLDLIGPNGKGHDKDFSTQTKKLSTSSNNDDKIN
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB9 GRGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASRHDPPPRRPAA
:. . ..:. . :.:.::..: :::::: ::::::: :::.::::.::::: .: :.
CCDS47 GKPVD-VKNPSVPLVDGESDPNKTTCEACNITFSRHETYMVHKQYYCATRHDPPLKRSAS
670 680 690 700 710 720
720 730 740 750 760
pF1KB9 PPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPP----------PGHAPAPESP
.:. .:::.:::.::. :: . : .
CCDS47 NK---------VPAMQRTMRTRKRRKMYEMCLPEQEQRPPLVQQRFLDVANLNNPCTSTQ
730 740 750 760 770
770 780 790
pF1KB9 RPGSGSGSG--------PGLAPARSPG--------PAA--------------DGPIDLSK
.: : : ::.. . :.. : ::::::
CCDS47 EPTEGLGECYHPRCDIFPGIVSKHLETSLTINKCVPVSKCDTTHSSVSCLEMDVPIDLSK
780 790 800 810 820 830
800 810 820 830 840 850
pF1KB9 K--PRRPLPGAPAPALADYHECTACRVSFHSLEAYLAHKKYSCPAAPPPGALGLPAAACP
: . . : ::::::.:..::...: :::::. ::
CCDS47 KCLSQSERTTTSPKRLLDYHECTVCKISFNKVENYLAHKQNFCPVTAHQRNDLGQLDGKV
840 850 860 870 880 890
860 870 880 890 900 910
pF1KB9 YCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGPSPAPAPAASPQPGSRGP
CCDS47 FPNPESERNSPDVSYERSIIKCEKNGNLKQPSPNGNLFSSHLATLQGLKVFSEAAQLIAT
900 910 920 930 940 950
1006 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:32:43 2016 done: Tue Nov 8 16:32:43 2016
Total Scan time: 4.710 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]