Result of FASTA (omim) for
pFN21AB9713
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9713, 374 aa
1>>>pF1KB9713 374 - 374 aa - 374 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0686+/-0.000288; mu= 16.6589+/- 0.018
mean_var=156.6759+/-31.594, 0's: 0 Z-trim(122.7): 128 B-trim: 46 in 1/56
Lambda= 0.102464
statistics sampled from 41082 (41290) to 41082 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.484), width: 16
Scan time: 6.590
The best scores are: opt bits E(85289)
NP_079521 (OMIM: 608127) pre-B-cell leukemia trans ( 374) 2504 381.3 1.9e-105
XP_016882816 (OMIM: 608127) PREDICTED: pre-B-cell ( 343) 2075 317.9 2.2e-86
XP_016882815 (OMIM: 608127) PREDICTED: pre-B-cell ( 357) 2075 317.9 2.3e-86
XP_011526622 (OMIM: 608127) PREDICTED: pre-B-cell ( 391) 2075 318.0 2.4e-86
XP_006722974 (OMIM: 608127) PREDICTED: pre-B-cell ( 288) 1924 295.5 1e-79
XP_011526624 (OMIM: 608127) PREDICTED: pre-B-cell ( 288) 1924 295.5 1e-79
XP_016882817 (OMIM: 608127) PREDICTED: pre-B-cell ( 327) 1625 251.3 2.3e-66
NP_006186 (OMIM: 176312) pre-B-cell leukemia trans ( 434) 1589 246.2 1.1e-64
NP_002576 (OMIM: 176310) pre-B-cell leukemia trans ( 430) 1580 244.8 2.7e-64
XP_005245286 (OMIM: 176310) PREDICTED: pre-B-cell ( 430) 1580 244.8 2.7e-64
XP_016856884 (OMIM: 176310) PREDICTED: pre-B-cell ( 406) 1578 244.5 3.2e-64
NP_001191892 (OMIM: 176310) pre-B-cell leukemia tr ( 420) 1578 244.5 3.3e-64
XP_016856885 (OMIM: 176310) PREDICTED: pre-B-cell ( 347) 1526 236.7 6e-62
NP_001191890 (OMIM: 176310) pre-B-cell leukemia tr ( 347) 1526 236.7 6e-62
NP_001317711 (OMIM: 176312) pre-B-cell leukemia tr ( 351) 1508 234.1 3.8e-61
NP_002577 (OMIM: 176311) pre-B-cell leukemia trans ( 430) 1497 232.6 1.3e-60
XP_016882818 (OMIM: 608127) PREDICTED: pre-B-cell ( 209) 1391 216.5 4.5e-56
NP_001128250 (OMIM: 176312) pre-B-cell leukemia tr ( 359) 1388 216.4 8.5e-56
XP_016870275 (OMIM: 176312) PREDICTED: pre-B-cell ( 276) 1307 204.2 2.9e-52
XP_006717194 (OMIM: 176312) PREDICTED: pre-B-cell ( 372) 1290 201.9 2e-51
XP_006717193 (OMIM: 176312) PREDICTED: pre-B-cell ( 455) 1290 202.0 2.3e-51
XP_005245285 (OMIM: 176310) PREDICTED: pre-B-cell ( 486) 1290 202.0 2.4e-51
XP_011507892 (OMIM: 176310) PREDICTED: pre-B-cell ( 462) 1288 201.7 2.8e-51
XP_011507894 (OMIM: 176310) PREDICTED: pre-B-cell ( 403) 1236 193.9 5.3e-49
XP_011507893 (OMIM: 176310) PREDICTED: pre-B-cell ( 403) 1236 193.9 5.3e-49
XP_011517057 (OMIM: 176312) PREDICTED: pre-B-cell ( 380) 1089 172.2 1.8e-42
XP_006717196 (OMIM: 176312) PREDICTED: pre-B-cell ( 274) 555 93.1 8.4e-19
XP_016882819 (OMIM: 608127) PREDICTED: pre-B-cell ( 188) 437 75.4 1.2e-13
XP_005264157 (OMIM: 604994) PREDICTED: homeobox pr ( 293) 215 42.8 0.0012
XP_016859632 (OMIM: 601739) PREDICTED: homeobox pr ( 352) 209 42.1 0.0025
XP_016859631 (OMIM: 601739) PREDICTED: homeobox pr ( 417) 209 42.2 0.0027
XP_016859630 (OMIM: 601739) PREDICTED: homeobox pr ( 433) 209 42.2 0.0028
NP_058628 (OMIM: 604994) homeobox protein SIX2 [Ho ( 291) 206 41.5 0.003
XP_011519893 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 205 41.4 0.0036
XP_006720590 (OMIM: 601740) PREDICTED: homeobox pr ( 331) 205 41.4 0.0036
NP_001273187 (OMIM: 602100) homeobox protein PKNOX ( 319) 204 41.3 0.0038
XP_006720589 (OMIM: 601740) PREDICTED: homeobox pr ( 389) 205 41.5 0.0039
XP_006720586 (OMIM: 601740) PREDICTED: homeobox pr ( 476) 205 41.6 0.0045
NP_733775 (OMIM: 601740) homeobox protein Meis2 is ( 477) 205 41.6 0.0045
NP_001307623 (OMIM: 602100) homeobox protein PKNOX ( 435) 204 41.4 0.0047
NP_004562 (OMIM: 602100) homeobox protein PKNOX1 i ( 436) 204 41.4 0.0047
XP_006720592 (OMIM: 601740) PREDICTED: homeobox pr ( 255) 199 40.4 0.0056
XP_016859633 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 200 40.7 0.0058
XP_016859634 (OMIM: 601739) PREDICTED: homeobox pr ( 321) 200 40.7 0.0058
XP_016859635 (OMIM: 601739) PREDICTED: homeobox pr ( 246) 198 40.2 0.0061
XP_016877694 (OMIM: 601740) PREDICTED: homeobox pr ( 306) 199 40.5 0.0063
NP_758527 (OMIM: 601740) homeobox protein Meis2 is ( 306) 199 40.5 0.0063
XP_005264381 (OMIM: 601739) PREDICTED: homeobox pr ( 400) 200 40.8 0.0067
NP_002390 (OMIM: 601740) homeobox protein Meis2 is ( 381) 199 40.6 0.0072
XP_005264382 (OMIM: 601739) PREDICTED: homeobox pr ( 325) 198 40.4 0.0072
>>NP_079521 (OMIM: 608127) pre-B-cell leukemia transcrip (374 aa)
initn: 2504 init1: 2504 opt: 2504 Z-score: 2014.1 bits: 381.3 E(85289): 1.9e-105
Smith-Waterman score: 2504; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KB9 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 KEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 SIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 IHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 EAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 SCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATAS
310 320 330 340 350 360
370
pF1KB9 PAGDPGSINSSTSN
::::::::::::::
NP_079 PAGDPGSINSSTSN
370
>>XP_016882816 (OMIM: 608127) PREDICTED: pre-B-cell leuk (343 aa)
initn: 2071 init1: 2071 opt: 2075 Z-score: 1671.8 bits: 317.9 E(85289): 2.2e-86
Smith-Waterman score: 2125; 94.8% identity (95.0% similar) in 343 aa overlap (49-374:1-343)
20 30 40 50 60
pF1KB9 TSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEIKEKT--------------
::::::::::::::::
XP_016 MKPALFSVLCEIKEKTASSFLTRPCEETTK
10 20 30
70 80 90 100 110 120
pF1KB9 ---VVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDNS
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAFLVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDNS
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 IEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGAI
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 HGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB9 AKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHAS
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB9 CLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATASP
280 290 300 310 320 330
370
pF1KB9 AGDPGSINSSTSN
:::::::::::::
XP_016 AGDPGSINSSTSN
340
>>XP_016882815 (OMIM: 608127) PREDICTED: pre-B-cell leuk (357 aa)
initn: 2071 init1: 2071 opt: 2075 Z-score: 1671.6 bits: 317.9 E(85289): 2.3e-86
Smith-Waterman score: 2195; 94.9% identity (95.2% similar) in 352 aa overlap (40-374:6-357)
10 20 30 40 50 60
pF1KB9 SPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEIKEKT-----
:::::::::::::::::::::::::
XP_016 MPQPPRKHALNCHRMKPALFSVLCEIKEKTASSFL
10 20 30
70 80 90 100 110
pF1KB9 ------------VVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTAT
.:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRPCEETTKQAFLVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTAT
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB9 PGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPK
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 EIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSH
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 LNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTE
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB9 VGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGA
280 290 300 310 320 330
360 370
pF1KB9 TPQPATASPAGDPGSINSSTSN
::::::::::::::::::::::
XP_016 TPQPATASPAGDPGSINSSTSN
340 350
>>XP_011526622 (OMIM: 608127) PREDICTED: pre-B-cell leuk (391 aa)
initn: 2093 init1: 2071 opt: 2075 Z-score: 1671.2 bits: 318.0 E(85289): 2.4e-86
Smith-Waterman score: 2456; 95.4% identity (95.7% similar) in 391 aa overlap (1-374:1-391)
10 20 30 40 50 60
pF1KB9 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
10 20 30 40 50 60
70 80 90 100
pF1KB9 KEKT-----------------VVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGG
:::: .::::::::::::::::::::::::::::::::::::::
XP_011 KEKTASSFLTRPCEETTKQAFLVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 AVARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQ
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 SRMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATE
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 VLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYT
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 GKTAVDTTEVGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKTAVDTTEVGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQS
310 320 330 340 350 360
350 360 370
pF1KB9 QAQGSWQGATPQPATASPAGDPGSINSSTSN
:::::::::::::::::::::::::::::::
XP_011 QAQGSWQGATPQPATASPAGDPGSINSSTSN
370 380 390
>>XP_006722974 (OMIM: 608127) PREDICTED: pre-B-cell leuk (288 aa)
initn: 1924 init1: 1924 opt: 1924 Z-score: 1552.0 bits: 295.5 E(85289): 1e-79
Smith-Waterman score: 1924; 100.0% identity (100.0% similar) in 288 aa overlap (87-374:1-288)
60 70 80 90 100 110
pF1KB9 LCEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGC
::::::::::::::::::::::::::::::
XP_006 MLLAEGVCRPEKRGRGGAVARAGTATPGGC
10 20 30
120 130 140 150 160 170
pF1KB9 PNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIER
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB9 MVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNP
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB9 YPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVP
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB9 GNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQP
220 230 240 250 260 270
360 370
pF1KB9 ATASPAGDPGSINSSTSN
::::::::::::::::::
XP_006 ATASPAGDPGSINSSTSN
280
>>XP_011526624 (OMIM: 608127) PREDICTED: pre-B-cell leuk (288 aa)
initn: 1924 init1: 1924 opt: 1924 Z-score: 1552.0 bits: 295.5 E(85289): 1e-79
Smith-Waterman score: 1924; 100.0% identity (100.0% similar) in 288 aa overlap (87-374:1-288)
60 70 80 90 100 110
pF1KB9 LCEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGC
::::::::::::::::::::::::::::::
XP_011 MLLAEGVCRPEKRGRGGAVARAGTATPGGC
10 20 30
120 130 140 150 160 170
pF1KB9 PNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIER
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB9 MVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNP
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB9 YPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVP
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB9 GNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQP
220 230 240 250 260 270
360 370
pF1KB9 ATASPAGDPGSINSSTSN
::::::::::::::::::
XP_011 ATASPAGDPGSINSSTSN
280
>>XP_016882817 (OMIM: 608127) PREDICTED: pre-B-cell leuk (327 aa)
initn: 1643 init1: 1621 opt: 1625 Z-score: 1312.5 bits: 251.3 E(85289): 2.3e-66
Smith-Waterman score: 2006; 94.5% identity (94.8% similar) in 326 aa overlap (1-309:1-326)
10 20 30 40 50 60
pF1KB9 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
10 20 30 40 50 60
70 80 90 100
pF1KB9 KEKT-----------------VVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGG
:::: .::::::::::::::::::::::::::::::::::::::
XP_016 KEKTASSFLTRPCEETTKQAFLVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 AVARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQ
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 SRMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATE
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 VLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYT
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 GKTAVDTTEVGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQS
::::::::::::::::::::::::::
XP_016 GKTAVDTTEVGVPGNHASCLSTPSSGE
310 320
>>NP_006186 (OMIM: 176312) pre-B-cell leukemia transcrip (434 aa)
initn: 1251 init1: 1029 opt: 1589 Z-score: 1282.4 bits: 246.2 E(85289): 1.1e-64
Smith-Waterman score: 1605; 64.2% identity (78.9% similar) in 408 aa overlap (1-370:25-430)
10 20 30
pF1KB9 MAAPPRPAPSPPAP---RRLDTSDVLQQIMAITDQS
:: :: : : :. : .:.:.:::.:::::
NP_006 MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 LDEAQARKHALNCHRMKPALFSVLCEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGV
::::::.:::::::::::::::::::::::: .:::: :.::::: ::.:::::::::::
NP_006 LDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB9 CRPEKRGRGGAVARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFT
::: : :.:.: :..:. :: .:::::::::::::.:::::::.::::::::: :::
NP_006 SGPEKGG-GSAAAAAAAAASGGS-SDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFT
130 140 150 160 170
160 170 180 190 200 210
pF1KB9 THVTNLLQEQSRMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRK
::: :::.:::: ::.:::::::::: :: :::.:::::::::::::: ::::.::::::
NP_006 THVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB9 RRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMG
::::::::::.:::::::::.:::::::::::::.: ..:.:::::::::::::::::.:
NP_006 RRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIG
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB9 KFQEEATIYTGKTAVDTTEV---GVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLA
::::::..:..:::: .... .: .:... .::.::::: : ::..:: :.....:
NP_006 KFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLN
300 310 320 330 340 350
340 350
pF1KB9 --SLQPPPGGGCLQSQ------------------------------AQGSWQGATPQPAT
: : :. .::: :.:.:: :: ..
NP_006 GDSYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSV
360 370 380 390 400 410
360 370
pF1KB9 ASPAGDPGSINSSTSN
.::. :::..:
NP_006 TSPTEGPGSVHSDTSN
420 430
>>NP_002576 (OMIM: 176310) pre-B-cell leukemia transcrip (430 aa)
initn: 1603 init1: 1042 opt: 1580 Z-score: 1275.2 bits: 244.8 E(85289): 2.7e-64
Smith-Waterman score: 1610; 65.9% identity (81.2% similar) in 393 aa overlap (15-374:39-430)
10 20 30 40
pF1KB9 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHAL
:. : .:.:::::.::::::::::::::::
NP_002 HSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 NCHRMKPALFSVLCEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGA
::::::::::.::::::::::.:::: :.:.: : ::.::::::::::: ::: : :.:
NP_002 NCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGPEK-GGGSA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 VARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQS
.: :..:. :: .:::.:::::::::::::::::.::::::::: :::::: :::.:::
NP_002 AAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 RMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEV
: ::.:::::::::. :: :::.:::::::::::::: ::::.::::::::::.:::::.
NP_002 RTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 LNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTG
:::::::::.:::::::::::::.: :.:.:::::::::::::::::.:::::::.::..
NP_002 LNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 KTAVDTTEVGVPGNHASCLSTPSS-GSSGPFPLPSAGDAFLTLRTLA--SLQPPPGGGCL
:::: .:.:.. :..:. :::.: :::. : . ..:: :.....: : : :. .
NP_002 KTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGDSYQGAQVGANV
310 320 330 340 350 360
350 360 370
pF1KB9 QSQ------------------------------AQGSWQGATPQPATASPAGDPGSINSS
::: :.:.:: :: ...::. :::..:.
NP_002 QSQVDTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSVTSPTEGPGSVHSD
370 380 390 400 410 420
pF1KB9 TSN
:::
NP_002 TSN
430
>>XP_005245286 (OMIM: 176310) PREDICTED: pre-B-cell leuk (430 aa)
initn: 1603 init1: 1042 opt: 1580 Z-score: 1275.2 bits: 244.8 E(85289): 2.7e-64
Smith-Waterman score: 1610; 65.9% identity (81.2% similar) in 393 aa overlap (15-374:39-430)
10 20 30 40
pF1KB9 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHAL
:. : .:.:::::.::::::::::::::::
XP_005 HSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 NCHRMKPALFSVLCEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGA
::::::::::.::::::::::.:::: :.:.: : ::.::::::::::: ::: : :.:
XP_005 NCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGPEK-GGGSA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 VARAGTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQS
.: :..:. :: .:::.:::::::::::::::::.::::::::: :::::: :::.:::
XP_005 AAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 RMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEV
: ::.:::::::::. :: :::.:::::::::::::: ::::.::::::::::.:::::.
XP_005 RTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 LNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTG
:::::::::.:::::::::::::.: :.:.:::::::::::::::::.:::::::.::..
XP_005 LNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 KTAVDTTEVGVPGNHASCLSTPSS-GSSGPFPLPSAGDAFLTLRTLA--SLQPPPGGGCL
:::: .:.:.. :..:. :::.: :::. : . ..:: :.....: : : :. .
XP_005 KTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGDSYQGAQVGANV
310 320 330 340 350 360
350 360 370
pF1KB9 QSQ------------------------------AQGSWQGATPQPATASPAGDPGSINSS
::: :.:.:: :: ...::. :::..:.
XP_005 QSQVDTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSVTSPTEGPGSVHSD
370 380 390 400 410 420
pF1KB9 TSN
:::
XP_005 TSN
430
374 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 01:40:06 2016 done: Tue Nov 8 01:40:07 2016
Total Scan time: 6.590 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]