Result of FASTA (omim) for
pFN21AB9711
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9711, 367 aa
1>>>pF1KB9711 367 - 367 aa - 367 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9445+/-0.000475; mu= 5.4959+/- 0.029
mean_var=388.3821+/-86.881, 0's: 0 Z-trim(118.2): 1476 B-trim: 22 in 1/53
Lambda= 0.065080
statistics sampled from 28882 (30856) to 28882 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.362), width: 16
Scan time: 7.530
The best scores are: opt bits E(85289)
NP_067632 (OMIM: 616458,616488) PR domain zinc fin ( 367) 2485 247.7 3.1e-65
XP_011542028 (OMIM: 616982,617039) PREDICTED: puta ( 395) 419 53.8 7.8e-07
NP_001129711 (OMIM: 616982,617039) putative histon ( 595) 419 54.1 9.7e-07
XP_005247283 (OMIM: 165215,616738) PREDICTED: MDS1 ( 906) 397 52.3 5e-06
XP_016861366 (OMIM: 165215,616738) PREDICTED: MDS1 ( 907) 397 52.3 5e-06
XP_005247282 (OMIM: 165215,616738) PREDICTED: MDS1 ( 915) 397 52.3 5.1e-06
XP_005247281 (OMIM: 165215,616738) PREDICTED: MDS1 ( 916) 397 52.3 5.1e-06
XP_005247272 (OMIM: 165215,616738) PREDICTED: MDS1 (1230) 397 52.5 5.9e-06
XP_005247271 (OMIM: 165215,616738) PREDICTED: MDS1 (1231) 397 52.5 5.9e-06
NP_004982 (OMIM: 165215,616738) MDS1 and EVI1 comp (1239) 397 52.5 5.9e-06
XP_005247270 (OMIM: 165215,616738) PREDICTED: MDS1 (1240) 397 52.5 5.9e-06
NP_001287753 (OMIM: 614161,614170) PR domain zinc ( 501) 349 47.4 8.4e-05
XP_005262765 (OMIM: 614161,614170) PREDICTED: PR d ( 346) 346 46.9 8.5e-05
XP_016863158 (OMIM: 614161,614170) PREDICTED: PR d ( 532) 346 47.2 0.00011
XP_016863159 (OMIM: 614161,614170) PREDICTED: PR d ( 532) 346 47.2 0.00011
XP_011529871 (OMIM: 614161,614170) PREDICTED: PR d ( 543) 346 47.2 0.00011
XP_011529870 (OMIM: 614161,614170) PREDICTED: PR d ( 543) 346 47.2 0.00011
XP_011529869 (OMIM: 614161,614170) PREDICTED: PR d ( 543) 346 47.2 0.00011
XP_011529866 (OMIM: 614161,614170) PREDICTED: PR d ( 606) 346 47.3 0.00011
NP_001171680 (OMIM: 616454,616468,616469) zinc fin ( 712) 316 44.5 0.00087
NP_079017 (OMIM: 616454,616468,616469) zinc finger ( 720) 316 44.6 0.00087
NP_037512 (OMIM: 603994) zinc finger protein 112 i ( 907) 308 44.0 0.0017
NP_001076804 (OMIM: 603994) zinc finger protein 11 ( 913) 308 44.0 0.0017
XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 304 43.4 0.0019
NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 304 43.4 0.0019
XP_011534366 (OMIM: 603423) PREDICTED: PR domain z ( 667) 302 43.2 0.0021
NP_878911 (OMIM: 603423) PR domain zinc finger pro ( 691) 302 43.2 0.0021
XP_011534365 (OMIM: 603423) PREDICTED: PR domain z ( 789) 302 43.3 0.0023
XP_016866676 (OMIM: 603423) PREDICTED: PR domain z ( 789) 302 43.3 0.0023
NP_001189 (OMIM: 603423) PR domain zinc finger pro ( 825) 302 43.3 0.0023
XP_011534364 (OMIM: 603423) PREDICTED: PR domain z ( 839) 302 43.3 0.0023
XP_006723247 (OMIM: 606741) PREDICTED: zinc finger ( 566) 296 42.5 0.0028
XP_005258908 (OMIM: 606741) PREDICTED: zinc finger ( 567) 296 42.5 0.0028
NP_001139137 (OMIM: 606741) zinc finger protein 18 ( 570) 296 42.5 0.0028
XP_005258907 (OMIM: 606741) PREDICTED: zinc finger ( 570) 296 42.5 0.0028
XP_016882228 (OMIM: 606741) PREDICTED: zinc finger ( 570) 296 42.5 0.0028
XP_006723246 (OMIM: 606741) PREDICTED: zinc finger ( 571) 296 42.5 0.0028
XP_005258906 (OMIM: 606741) PREDICTED: zinc finger ( 571) 296 42.5 0.0028
NP_001025168 (OMIM: 606741) zinc finger protein 18 ( 571) 296 42.5 0.0028
XP_016882229 (OMIM: 606741) PREDICTED: zinc finger ( 585) 296 42.5 0.0029
NP_001269937 (OMIM: 604075) zinc finger protein 13 ( 559) 294 42.3 0.0032
XP_016883547 (OMIM: 604075) PREDICTED: zinc finger ( 590) 294 42.4 0.0033
NP_001269932 (OMIM: 604075) zinc finger protein 13 ( 591) 294 42.4 0.0033
XP_016883544 (OMIM: 604075) PREDICTED: zinc finger ( 591) 294 42.4 0.0033
XP_016883546 (OMIM: 604075) PREDICTED: zinc finger ( 591) 294 42.4 0.0033
XP_016883545 (OMIM: 604075) PREDICTED: zinc finger ( 591) 294 42.4 0.0033
NP_001269933 (OMIM: 604075) zinc finger protein 13 ( 591) 294 42.4 0.0033
XP_016863160 (OMIM: 614161,614170) PREDICTED: PR d ( 316) 289 41.4 0.0033
NP_001269934 (OMIM: 604075) zinc finger protein 13 ( 635) 294 42.4 0.0034
XP_011527642 (OMIM: 604075) PREDICTED: zinc finger ( 636) 294 42.4 0.0034
>>NP_067632 (OMIM: 616458,616488) PR domain zinc finger (367 aa)
initn: 2485 init1: 2485 opt: 2485 Z-score: 1292.3 bits: 247.7 E(85289): 3.1e-65
Smith-Waterman score: 2485; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367)
10 20 30 40 50 60
pF1KB9 MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNVLGEQLFEDKSHHASPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNVLGEQLFEDKSHHASPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 TAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 VIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEDQKKNKHEDFHPADSAAGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 GTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEDQKKNKHEDFHPADSAAGPA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 GRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 CQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 CQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAH
310 320 330 340 350 360
pF1KB9 HLPAMVL
:::::::
NP_067 HLPAMVL
>>XP_011542028 (OMIM: 616982,617039) PREDICTED: putative (395 aa)
initn: 758 init1: 308 opt: 419 Z-score: 243.6 bits: 53.8 E(85289): 7.8e-07
Smith-Waterman score: 510; 32.2% identity (55.7% similar) in 314 aa overlap (84-326:44-356)
60 70 80 90 100 110
pF1KB9 SHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTE
:: :: . :..:: . :: . :. ::
XP_011 GPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTW
20 30 40 50 60 70
120 130 140 150 160 170
pF1KB9 MGPFTGRVIAPEHVDI--CKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQ
.::: : .. ::.:. .:.. .::....:::...:::... .. ::: ::.:::.
XP_011 IGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCG
80 90 100 110 120 130
180 190 200 210
pF1KB9 EQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIP----------GVPG--LE
:::: ::: ..:::.: :: ::::::..:...:.::: .::. .:
XP_011 EQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVME
140 150 160 170 180 190
220 230 240 250
pF1KB9 EDQKKNKHEDFHPADSAAGPAGRMRCVI-----CHR-------------GFN--------
... . :. ... : :. ..: :. : : :::
XP_011 AMCRQDALQPFNKSSKLA-PTTQQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQR
200 210 220 230 240 250
260 270 280
pF1KB9 ------SRSNLRSH---------------------MRIHTL----DKPFVCRFCNRRFSQ
: :.:.:. ...:. :.:. : :.. :::
XP_011 VLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQ
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB9 SSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHA
: ::::: :...::.:: : :.. . : : .. . :
XP_011 PSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQL
320 330 340 350 360 370
350 360
pF1KB9 HAPALAAAAAAAAAAAAHHLPAMVL
XP_011 SRHQRMPNECKPITESPESIEVD
380 390
>>NP_001129711 (OMIM: 616982,617039) putative histone-ly (595 aa)
initn: 758 init1: 308 opt: 419 Z-score: 242.0 bits: 54.1 E(85289): 9.7e-07
Smith-Waterman score: 510; 32.2% identity (55.7% similar) in 314 aa overlap (84-326:244-556)
60 70 80 90 100 110
pF1KB9 SHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTE
:: :: . :..:: . :: . :. ::
NP_001 GPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTW
220 230 240 250 260 270
120 130 140 150 160 170
pF1KB9 MGPFTGRVIAPEHVDI--CKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQ
.::: : .. ::.:. .:.. .::....:::...:::... .. ::: ::.:::.
NP_001 IGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCG
280 290 300 310 320 330
180 190 200 210
pF1KB9 EQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIP----------GVPG--LE
:::: ::: ..:::.: :: ::::::..:...:.::: .::. .:
NP_001 EQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVME
340 350 360 370 380 390
220 230 240 250
pF1KB9 EDQKKNKHEDFHPADSAAGPAGRMRCVI-----CHR-------------GFN--------
... . :. ... : :. ..: :. : : :::
NP_001 AMCRQDALQPFNKSSKLA-PTTQQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQR
400 410 420 430 440 450
260 270 280
pF1KB9 ------SRSNLRSH---------------------MRIHTL----DKPFVCRFCNRRFSQ
: :.:.:. ...:. :.:. : :.. :::
NP_001 VLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQ
460 470 480 490 500 510
290 300 310 320 330 340
pF1KB9 SSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHA
: ::::: :...::.:: : :.. . : : .. . :
NP_001 PSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQL
520 530 540 550 560 570
350 360
pF1KB9 HAPALAAAAAAAAAAAAHHLPAMVL
NP_001 SRHQRMPNECKPITESPESIEVD
580 590
>>XP_005247283 (OMIM: 165215,616738) PREDICTED: MDS1 and (906 aa)
initn: 430 init1: 178 opt: 397 Z-score: 229.1 bits: 52.3 E(85289): 5e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
XP_005 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
XP_005 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
XP_005 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
XP_005 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
XP_005 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
XP_005 NLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLK
310 320 330 340 350 360
>>XP_016861366 (OMIM: 165215,616738) PREDICTED: MDS1 and (907 aa)
initn: 430 init1: 178 opt: 397 Z-score: 229.1 bits: 52.3 E(85289): 5e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
XP_016 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
XP_016 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
XP_016 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
XP_016 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
XP_016 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
XP_016 NLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGL
310 320 330 340 350 360
>>XP_005247282 (OMIM: 165215,616738) PREDICTED: MDS1 and (915 aa)
initn: 430 init1: 178 opt: 397 Z-score: 229.1 bits: 52.3 E(85289): 5.1e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
XP_005 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
XP_005 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
XP_005 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
XP_005 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
XP_005 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
XP_005 NLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLK
310 320 330 340 350 360
>>XP_005247281 (OMIM: 165215,616738) PREDICTED: MDS1 and (916 aa)
initn: 430 init1: 178 opt: 397 Z-score: 229.1 bits: 52.3 E(85289): 5.1e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
XP_005 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
XP_005 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
XP_005 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
XP_005 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
XP_005 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
XP_005 NLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGL
310 320 330 340 350 360
>>XP_005247272 (OMIM: 165215,616738) PREDICTED: MDS1 and (1230 aa)
initn: 430 init1: 178 opt: 397 Z-score: 227.9 bits: 52.5 E(85289): 5.9e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
XP_005 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
XP_005 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
XP_005 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
XP_005 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
XP_005 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
XP_005 NLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLK
310 320 330 340 350 360
>>XP_005247271 (OMIM: 165215,616738) PREDICTED: MDS1 and (1231 aa)
initn: 430 init1: 178 opt: 397 Z-score: 227.9 bits: 52.5 E(85289): 5.9e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
XP_005 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
XP_005 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
XP_005 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
XP_005 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
XP_005 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
XP_005 NLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGL
310 320 330 340 350 360
>>NP_004982 (OMIM: 165215,616738) MDS1 and EVI1 complex (1239 aa)
initn: 430 init1: 178 opt: 397 Z-score: 227.9 bits: 52.5 E(85289): 5.9e-06
Smith-Waterman score: 397; 30.2% identity (62.9% similar) in 278 aa overlap (57-320:50-312)
30 40 50 60 70 80
pF1KB9 VITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPA
:. . ::: . .. ... . ... .::
NP_004 NYPEIPLEEMPDADGVASTPSLNIQEPCSPATSSEAFTPKE-GSPYKAPIYIPDDIPIPA
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB9 EVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTV
: . .:..:: ::::..: :..: ..::..: :. . :. . ::...: .:
NP_004 EFELRESNMPGAGLGIWTKRKIEVGEKFGPYVG-----EQRSNLKDPSYGWEILDEFYNV
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB9 RYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNS-
.. ::::: : ::. ::. : ...:: . ::. .:::... : : .:::... .
NP_004 KFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSED
140 150 160 170 180 190
210 220 230 240 250
pF1KB9 --HNTFLGIPGVPGLEEDQKKNKHEDFHPA-DSAAGPAGRMR--CVICHRGFNS-----R
:.:. .: ..:. .. . :: .: : : ... : : .:. .
NP_004 YPHETM-----APDIHEE-RQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQ
200 210 220 230 240
260 270 280 290 300 310
pF1KB9 SNLRSH---MRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLA
..:.:. ..:::... :. :.. : . ..:..:. :: :: :::. : .:.. .
NP_004 QKLESENDLQEIHTIQE---CKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKS
250 260 270 280 290 300
320 330 340 350 360
pF1KB9 GLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL
.: :: :
NP_004 NLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLK
310 320 330 340 350 360
367 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 01:30:37 2016 done: Tue Nov 8 01:30:38 2016
Total Scan time: 7.530 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]