Result of FASTA (ccds) for
pFN21AB9596
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9596, 501 aa
1>>>pF1KB9596 501 - 501 aa - 501 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.5711+/-0.000961; mu= -3.3165+/- 0.058
mean_var=335.6741+/-68.958, 0's: 0 Z-trim(116.0): 71 B-trim: 1038 in 1/52
Lambda= 0.070003
statistics sampled from 16567 (16637) to 16567 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.511), width: 16
Scan time: 3.490
The best scores are: opt bits E(32554)
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 3482 365.1 1e-100
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 1171 131.7 2e-30
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 623 76.2 6.2e-14
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 620 76.0 1e-13
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 616 75.6 1.3e-13
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 616 75.6 1.3e-13
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 610 74.9 1.5e-13
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 606 74.5 2.1e-13
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 597 73.7 4.9e-13
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 585 72.5 1.2e-12
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 574 71.3 2.1e-12
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 558 69.7 6.9e-12
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 554 69.4 1e-11
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 550 68.9 1.1e-11
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 540 67.9 2.5e-11
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 538 67.7 2.8e-11
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 538 67.7 2.8e-11
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 529 66.7 4.4e-11
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 531 67.0 4.6e-11
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 529 66.8 5.5e-11
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 528 66.7 5.7e-11
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 519 65.7 9.4e-11
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 519 65.7 1e-10
>>CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 (501 aa)
initn: 3482 init1: 3482 opt: 3482 Z-score: 1921.7 bits: 365.1 E(32554): 1e-100
Smith-Waterman score: 3482; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501)
10 20 30 40 50 60
pF1KB9 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 AHLKEPPPAASKGAPATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AHLKEPPPAASKGAPATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 PRSAASTPAGSPDGSLPEHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PRSAASTPAGSPDGSLPEHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LALPYAAAPPAAYGQPCAQGLEAGAAGGYQCSMRAMSLYTGAERPAHMCVPPALDEALSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LALPYAAAPPAAYGQPCAQGLEAGAAGGYQCSMRAMSLYTGAERPAHMCVPPALDEALSD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 HPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPPPPAPQPQPTPQPGAAAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPPPPAPQPQPTPQPGAAAAQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 AASWYLNHSGDLNHLPGHTFAAQQQTFPNVREMFNSHRLGIENSTLGESQVSGNASCQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AASWYLNHSGDLNHLPGHTFAAQQQTFPNVREMFNSHRLGIENSTLGESQVSGNASCQLP
430 440 450 460 470 480
490 500
pF1KB9 YRSTPPLYRHAAPYSYDCTKY
:::::::::::::::::::::
CCDS10 YRSTPPLYRHAAPYSYDCTKY
490 500
>>CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 (553 aa)
initn: 1284 init1: 813 opt: 1171 Z-score: 659.7 bits: 131.7 E(32554): 2e-30
Smith-Waterman score: 1468; 50.4% identity (66.1% similar) in 573 aa overlap (1-487:1-539)
10 20 30 40 50
pF1KB9 MQARYSVSDPNALGVVPYLS-EQNYYRAA-----GSYGGMASPMGVYS--GHPEQYSAGM
::::::::.::.:::::::. ::.::::: :.: .: .::.::: .: ::: .::
CCDS44 MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 GRSYAPYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYREN
.:.:.:: :: :::.:::::::::::::::::::.::::::::::::::::::::.:
CCDS44 ARAYGPYTP-QPQ-PKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDN
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 KQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 VSKEKEE--RAHLKEPPPAASKGAPATPHLAD--APKEAEKKVVI---KSEAAS-PALPV
. :.::: : ::::::: . . :: :. :: :: : : :.: .. :. :
CCDS44 AVKDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPP-
180 190 200 210 220 230
230 240 250 260
pF1KB9 ITKVETLSPESAL-QGS----PR------SAASTPAGS-PDGSLPEHHA-----------
. ::: .:: .:: :. :..: .:: : :::: .
CCDS44 ----QPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPP
240 250 260 270 280 290
270 280 290 300
pF1KB9 -AAPNGLP-----GFSVENIMT-LRTSPPGG--ELSPG-------AGRAGLVVPPLAL-P
::.. : ::::.:::: :: :: .. ::: : ..::: ..:::::
CCDS44 PPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAG-IAPPLALGA
300 310 320 330 340 350
310 320 330 340
pF1KB9 YAAAPPAAYGQPCAQ----------GLEAGAAGG------YQCSMRAMSLYTGAERPAHM
:. . . :..::.: : :::::: :.:...:::::...:: .:.
CCDS44 YSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHL
360 370 380 390 400 410
350 360 370 380 390 400
pF1KB9 CVPP------ALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPP
: :.:. : :. :.. :. .:. : :. .. : :. :::
CCDS44 QGAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGG---QEAGHH-------
420 430 440 450 460
410 420 430 440 450
pF1KB9 PPAPQPQPTPQPGAAAAQAASWYLNHSG-DLNHLPGHTFAA-------QQQTFPNVREMF
:.: .. .:::::..: ::.:: . . :: :::.: .:::::
CCDS44 -----------PAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMF
470 480 490 500 510
460 470 480 490 500
pF1KB9 NSHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTKY
.:.:.:..:: :.::.:::. . :. :
CCDS44 ESQRIGLNNSP-----VNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF
520 530 540 550
>>CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 (330 aa)
initn: 622 init1: 570 opt: 623 Z-score: 363.6 bits: 76.2 E(32554): 6.2e-14
Smith-Waterman score: 644; 37.7% identity (60.5% similar) in 342 aa overlap (64-402:9-318)
40 50 60 70 80 90
pF1KB9 MASPMGVYSGHPEQYSAGMGRSYAPYHHHQPAAPK-DLVKPPYSYIALITMAIQNAPEKK
:.:: . .::::::::::.::::..: ..
CCDS13 MQQQPLPGPGAPTTEPTKPPYSYIALIAMAIQSSPGQR
10 20 30
100 110 120 130 140 150
pF1KB9 ITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS
::.:::..:: :: :::.:. :::::::::::::::::::::::.:::::::::::::
CCDS13 ATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDC
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB9 YNMFENGSFLRRRRRFKKKDVSKEKEERAHLKEPPPAASKGAPATPHLADAPKEAEKKVV
..:::.:::::::::: .. .. . :. .. : :.. :..:. . . . . .
CCDS13 HDMFEHGSFLRRRRRFTRQTGAEGTRGPAKARRGPLRATSQDPGVPNATTGRQCSFPPEL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB9 IKSEAASPALPVITKVETLSPESALQGSPRSAASTPAGSPDGSLPEHHAAAPNGLPGFSV
.. : . : . .. : .. .: :: : . : :. : :. ::
CCDS13 PDPKGLSFGGLVGAMPASMCPATT-DGRPRP----PMEPKEISTPK--PACPGELP----
160 170 180 190 200
280 290 300 310 320 330
pF1KB9 ENIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAAYGQPCAQGLEAGAAGGYQCS
. : .: :. . : ..: . :: . . : :.: ...:::
CCDS13 --VATSSSSCPAFGFPAGFSEAE--------SFNKAPTPVLS-P-----ESGIGSSYQCR
210 220 230 240 250
340 350 360 370 380 390
pF1KB9 MRAMSLYTGAERPA--HMCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQ
..:... ::. :. :. . : . : :. : : . : : . .. .: : :
CCDS13 LQALNFCMGAD-PGLEHLLASAAPSPA---PPTPPGSLRAPLPLPTDHKEPWVAGGFPVQ
260 270 280 290 300
400 410 420 430 440 450
pF1KB9 HHGHHHPQAPPPPPAPQPQPTPQPGAAAAQAASWYLNHSGDLNHLPGHTFAAQQQTFPNV
: .: . :
CCDS13 G-GSGYPLGLTPCLYRTPGMFFFE
310 320 330
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 633 init1: 546 opt: 620 Z-score: 359.8 bits: 76.0 E(32554): 1e-13
Smith-Waterman score: 636; 41.1% identity (60.5% similar) in 309 aa overlap (27-295:101-402)
10 20 30 40 50
pF1KB9 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSY
: : ::... : :: ..: . .
CCDS62 PQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGL
80 90 100 110 120 130
60 70 80 90 100 110
pF1KB9 APYHHHQPAAPKD-LVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQG
:: . ::. :::::::::::::::: ..:.::.::.:: .:: .:::.:::. .
CCDS62 AP------SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPA
140 150 160 170 180
120 130 140 150 160 170
pF1KB9 WQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSK
::::::::::::.::::.::. .::::.::::::.: .::.::::::::.:::... .
CCDS62 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEH
190 200 210 220 230 240
180 190 200 210
pF1KB9 EKEERAHLKE---------------P---P----PAASKGA---PATPHLADAPKEAEKK
.:. : . . : : :::. :: ::. : : .
CCDS62 LREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYP
250 260 270 280 290 300
220 230 240 250
pF1KB9 VVIKSEAA--SPALPVITKVET----------LSPESALQGSPRSAASTPAGSPD--GSL
.. : ::.:.. . : :.: :: . .::.. ::. :.
CCDS62 YALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTT
310 320 330 340 350 360
260 270 280 290 300 310
pF1KB9 PEHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAAYGQP
. :.. :.::.:::. . ::: . ::: ::
CCDS62 ASLIKSEPSARPSFSIENIIGGGPAAPGGS-AVGAGVAGGTGGSGGGSTAQSFLRPPGTV
370 380 390 400 410 420
320 330 340 350 360 370
pF1KB9 CAQGLEAGAAGGYQCSMRAMSLYTGAERPAHMCVPPALDEALSDHPSGPTSPLSALNLAA
CCDS62 QSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
430 440 450 460 470
>>CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 (457 aa)
initn: 684 init1: 524 opt: 616 Z-score: 357.9 bits: 75.6 E(32554): 1.3e-13
Smith-Waterman score: 628; 40.7% identity (63.8% similar) in 290 aa overlap (14-277:101-383)
10 20 30 40
pF1KB9 MQARYSVSDPNALGVVPYLSEQNYY---RAAGSYGGMASPMGV
:. :.:: . .:::..::.: ..
CCDS13 AGMSPSLAGMSPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANM
80 90 100 110 120 130
50 60 70 80 90 100
pF1KB9 YSGHPEQYSAGMGRSYAPYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQ
: : .::..:. : ... . .:::::::.:::::::..:.: .::. :::
CCDS13 NSMSPMYGQAGLSRARDPKTYRRSYTH---AKPPYSYISLITMAIQQSPNKMLTLSEIYQ
140 150 160 170 180
110 120 130 140 150 160
pF1KB9 FIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGS
.::: :::::.:.: :::::::.::.:.::.::::. ::::::.::: ::: ::::::
CCDS13 WIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGC
190 200 210 220 230 240
170 180 190 200
pF1KB9 FLRRRRRFK-----------------KKDVSKEKEERAHLKEPPPAASKGAPA---TPHL
.:::..::: :: .. . .:.: : ::. .:: .::
CCDS13 YLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASE-TPAGTESPHS
250 260 270 280 290 300
210 220 230 240 250
pF1KB9 ADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGSPR--SAASTPAGSPDGSL-P
. .: . .:. . ..:: . . :: . :.. . . :. :.. : :
CCDS13 SASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKP
310 320 330 340 350 360
260 270 280 290 300 310
pF1KB9 EHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAAYGQPC
::: : . : ::..:.:.
CCDS13 EHHYAFNH--P-FSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSPMPGSLA
370 380 390 400 410 420
>>CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 (463 aa)
initn: 684 init1: 524 opt: 616 Z-score: 357.8 bits: 75.6 E(32554): 1.3e-13
Smith-Waterman score: 628; 40.7% identity (63.8% similar) in 290 aa overlap (14-277:107-389)
10 20 30 40
pF1KB9 MQARYSVSDPNALGVVPYLSEQNYY---RAAGSYGGMASPMGV
:. :.:: . .:::..::.: ..
CCDS46 AGMSPSLAGMSPGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANM
80 90 100 110 120 130
50 60 70 80 90 100
pF1KB9 YSGHPEQYSAGMGRSYAPYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQ
: : .::..:. : ... . .:::::::.:::::::..:.: .::. :::
CCDS46 NSMSPMYGQAGLSRARDPKTYRRSYTH---AKPPYSYISLITMAIQQSPNKMLTLSEIYQ
140 150 160 170 180 190
110 120 130 140 150 160
pF1KB9 FIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGS
.::: :::::.:.: :::::::.::.:.::.::::. ::::::.::: ::: ::::::
CCDS46 WIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGC
200 210 220 230 240 250
170 180 190 200
pF1KB9 FLRRRRRFK-----------------KKDVSKEKEERAHLKEPPPAASKGAPA---TPHL
.:::..::: :: .. . .:.: : ::. .:: .::
CCDS46 YLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASE-TPAGTESPHS
260 270 280 290 300 310
210 220 230 240 250
pF1KB9 ADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGSPR--SAASTPAGSPDGSL-P
. .: . .:. . ..:: . . :: . :.. . . :. :.. : :
CCDS46 SASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKP
320 330 340 350 360 370
260 270 280 290 300 310
pF1KB9 EHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAAYGQPC
::: : . : ::..:.:.
CCDS46 EHHYAFNH--P-FSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSPMPGSLA
380 390 400 410 420
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 567 init1: 510 opt: 610 Z-score: 356.7 bits: 74.9 E(32554): 1.5e-13
Smith-Waterman score: 613; 38.8% identity (60.0% similar) in 335 aa overlap (1-322:1-316)
10 20 30 40 50
pF1KB9 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPM-GVYSGH-PEQYSAGMGRSY--
: .: ... : :.. : : :.. : ::. :. :. ::. .:: :..
CCDS55 MAGRSDMDPPAAFSGFPALP------AVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPT
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 -APYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQG
:: .. : . ::::::::::.::. .:: ...:: .::.:: .:: :::.. .
CCDS55 PAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 WQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSK
:::::::::.::.:::::::. .::::.:::::: . .::.::::::::.:::. ..
CCDS55 WQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 EKEERAHLKEPPPAASKGAPATPHLADAPKEAEKKVVIKSEAASPALPV----ITKVETL
. : :: :: .: :: : : : . .:. :. . .. .:
CCDS55 H----AAAAPGPPLPFPYAPYAP----APGPALL-VPPPSAGPGPSPPARLFSVDSLVNL
180 190 200 210 220
240 250 260 270 280 290
pF1KB9 SPESALQGSPRSAASTPAGSPDGSLPEHHAAAPNGLPGFS-VENIMTLRTSPPGGELSPG
.:: : :.:. . . ...: ::: : .: : . ..: .. :: :.
CCDS55 QPELAGLGAPEPPCCAAPDAAAAAFPPCAAAASP--PLYSQVPDRLVLPATRPGPGPLPA
230 240 250 260 270 280
300 310 320 330 340
pF1KB9 AGRAGLVVPPLAL-PYAAAPPAAY-GQP-CAQGLEAGAAGGYQCSMRAMSLYTGAERPAH
.:. : :: : . : :: :: :.:::
CCDS55 EPLLALAGPAAALGPLS--PGEAYLRQPGFASGLERYL
290 300 310
350 360 370 380 390 400
pF1KB9 MCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPPPPAPQ
>>CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 (345 aa)
initn: 606 init1: 560 opt: 606 Z-score: 354.1 bits: 74.5 E(32554): 2.1e-13
Smith-Waterman score: 644; 41.7% identity (61.0% similar) in 336 aa overlap (35-339:14-333)
10 20 30 40 50 60
pF1KB9 YSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYHHHQP
:::: .: ::. :. ..::
CCDS10 MSHLFDPRLPALAASPM-LYLYGPER--PGLPLAFAPAAALAA
10 20 30 40
70 80 90 100 110 120
pF1KB9 AAPKDLV-KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHN
.. . ::::::::::.::::.:::...::::::::::::::::..:.::::::::::
CCDS10 SGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 LSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKE-KEERA-
::::.:::::::. .::::::::::: .:::::.. ::.:. : . : :. ::
CCDS10 LSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAE
110 120 130 140 150 160
190 200 210 220 230
pF1KB9 -HLK--EPPPAASKGA----PATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPE
: . : : :..:: :: .: :: . .. :: : . : ::.
CCDS10 THQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLL----DGPSPPAP-LHWPGTASPN
170 180 190 200 210
240 250 260 270 280
pF1KB9 ----SALQGSPRSAASTPAGSPDG-SLPEHHAA--APNGLP---GFSVENIMTLRTS--P
.: ::. :.. : . :: . : . :. .:.. .::...:.. . . :
CCDS10 EDAGDAAQGAAAVAVGQAARTGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKP
220 230 240 250 260 270
290 300 310 320 330
pF1KB9 PGG-ELSPGA-----GRAGLVVPPLALPYAAAPP---AAYGQPCAQGLEAGAAGGYQCSM
:.: :: :: :: : . :: . :: . . .: .:: : :: ..
CCDS10 PSGDELLGGAKPGPGGRLGASL--LAASSSLRPPFNASLMLDPHVQG------GFYQLGI
280 290 300 310 320
340 350 360 370 380 390
pF1KB9 RAMSLYTGAERPAHMCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHG
.: .
CCDS10 PFLSYFPLQVPDTVLHFQ
330 340
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 676 init1: 523 opt: 597 Z-score: 347.5 bits: 73.7 E(32554): 4.9e-13
Smith-Waterman score: 597; 35.3% identity (56.5% similar) in 377 aa overlap (32-390:84-448)
10 20 30 40 50 60
pF1KB9 QARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYHH
:: .: : . ..: : . :
CCDS75 RRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGG
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB9 HQPAAPKD-LVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSI
.. :. :::::::::::::::: ..:.:..::. : .:: :::.:::. .:::::
CCDS75 SAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSI
120 130 140 150 160 170
130 140 150 160 170
pF1KB9 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDV---SKEK
:::::::.::::.::. .::::.::::::.: .::.::::::::.:::.. . .
CCDS75 RHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNAAA
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB9 EERAHLKEPPPAASKGAPATPH--LADAPKEAEKKVVIKSEAASPALPVITKVETLSPES
: :. :.. : ::. . :: . . . .: .. .: :
CCDS75 AESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGL----QLPPYAPPS
240 250 260 270 280
240 250 260 270 280 290
pF1KB9 ALQGSPRSAASTPA---GSPDGSLPEHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAG
:: .. .::.. : :: : : ::: . .:. . : .. :: : .:.
CCDS75 ALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRP-HPLGAALPG-PLPASAA
290 300 310 320 330 340
300 310 320 330 340 350
pF1KB9 RAGLVVPPLALPYAAAPPAAYGQPCAQGLEAGAAGGYQCSMRAMSLYTGAERPAHMCVPP
.:: : : : .: .. : : :.. . .: . .. :. . .::
CCDS75 KAG---GPGASALARSP---FSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPP
350 360 370 380 390 400
360 370 380 390 400
pF1KB9 ALDEA----LSDHPSGPTSPLS-----ALNLAAGQEGALAATGHHHQHHGHHHPQAPPPP
: . .. ::.. :. : ::.. .. :: : ::
CCDS75 APGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTAR
410 420 430 440 450 460
410 420 430 440 450 460
pF1KB9 PAPQPQPTPQPGAAAAQAASWYLNHSGDLNHLPGHTFAAQQQTFPNVREMFNSHRLGIEN
CCDS75 ISNC
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 664 init1: 518 opt: 585 Z-score: 340.5 bits: 72.5 E(32554): 1.2e-12
Smith-Waterman score: 614; 36.2% identity (56.5% similar) in 428 aa overlap (27-433:93-491)
10 20 30 40 50
pF1KB9 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYG-GMASPMGVYSGHPEQYSAGMGRS
:::: : : :. :. . : :.: . .
CCDS30 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA-T
70 80 90 100 110 120
60 70 80 90 100 110
pF1KB9 YAPYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQG
.: :::::::::::::::: ..:.:..::. : .:: :::.:::. .
CCDS30 RSP-----------LVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA
130 140 150 160 170
120 130 140 150 160 170
pF1KB9 WQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSK
::::::::::::.::::.::. .::::.::::::.: .::.::::::::.:::.. .
CCDS30 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB9 EKEERAHLKEPPPAASKGAPATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPES
. : . : .:. :. : . . . . :::. . .:
CCDS30 PHP---HPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYG-APPPGPAP
240 250 260 270 280
240 250 260 270 280 290
pF1KB9 ALQGSPRS---AASTPAGSPDGSLPEHHAAAPN-GLPGFSVENIMTLRTSP-PGGELSPG
. :.. ::.. :. . :.: .:::: : : :: .: :.. .::
CCDS30 HPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPG
290 300 310 320 330 340
300 310 320 330
pF1KB9 AGRAGLVV---PPLALP---YAAA--PPAA---YGQPCA---QGLEAGAAGGYQCSMRAM
: ::: . :. :::. :::: : : : :::.. :.:: :
CCDS30 PGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGG------AG
350 360 370 380 390 400
340 350 360 370 380 390
pF1KB9 SLYTGA-ERPAHMCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHH
. .:: .::. ..:. .. : .: ..: .: . . : : ::.: : .
CCDS30 GGGAGAGQRPSF-----SIDHIMG-HGGGGAAPPGAGEGSPGPPFA-AAAGPGGQAQVLA
410 420 430 440 450
400 410 420 430 440 450
pF1KB9 HPQAPPPPPAPQPQPTPQPGAAAAQAASWYLNHSGDLNHLPGHTFAAQQQTFPNVREMFN
:: :. .:: : ...: . .. . :.
CCDS30 MLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
460 470 480 490
460 470 480 490 500
pF1KB9 SHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTKY
501 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:08:54 2016 done: Sun Nov 6 06:08:55 2016
Total Scan time: 3.490 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]