Result of FASTA (ccds) for
pFN21AB9096
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9096, 602 aa
1>>>pF1KB9096 602 - 602 aa - 602 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6247+/-0.000859; mu= 17.1482+/- 0.051
mean_var=65.0182+/-13.449, 0's: 0 Z-trim(105.5): 21 B-trim: 36 in 1/49
Lambda= 0.159058
statistics sampled from 8425 (8438) to 8425 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.259), width: 16
Scan time: 3.620
The best scores are: opt bits E(32554)
CCDS11211.1 SLC47A2 gene_id:146802|Hs108|chr17 ( 602) 3948 915.0 0
CCDS58530.1 SLC47A2 gene_id:146802|Hs108|chr17 ( 580) 1662 390.4 3.3e-108
CCDS11209.1 SLC47A1 gene_id:55244|Hs108|chr17 ( 570) 1116 265.1 1.7e-70
>>CCDS11211.1 SLC47A2 gene_id:146802|Hs108|chr17 (602 aa)
initn: 3948 init1: 3948 opt: 3948 Z-score: 4890.8 bits: 915.0 E(32554): 0
Smith-Waterman score: 3948; 100.0% identity (100.0% similar) in 602 aa overlap (1-602:1-602)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT
550 560 570 580 590 600
pF1KB9 RH
::
CCDS11 RH
>>CCDS58530.1 SLC47A2 gene_id:146802|Hs108|chr17 (580 aa)
initn: 2840 init1: 1660 opt: 1662 Z-score: 2056.0 bits: 390.4 E(32554): 3.3e-108
Smith-Waterman score: 3573; 91.9% identity (91.9% similar) in 616 aa overlap (1-602:1-580)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQ---
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
:::::::::::::::::::::::::::
CCDS58 ---------------------------------KITWPQVLSGVVGNCVNGVANYALVSV
180 190 200
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
210 220 230 240 250 260
310 320 330 340
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYM--------------IPLGLSI
::::::::::::::::::::::::::::::::::::::: :::::::
CCDS58 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSI
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
330 340 350 360 370 380
410 420 430 440 450 460
pF1KB9 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
390 400 410 420 430 440
470 480 490 500 510 520
pF1KB9 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV
450 460 470 480 490 500
530 540 550 560 570 580
pF1KB9 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS
510 520 530 540 550 560
590 600
pF1KB9 ATLMVGLTVRILATRH
::::::::::::::::
CCDS58 ATLMVGLTVRILATRH
570 580
>>CCDS11209.1 SLC47A1 gene_id:55244|Hs108|chr17 (570 aa)
initn: 1085 init1: 1085 opt: 1116 Z-score: 1379.0 bits: 265.1 E(32554): 1.7e-70
Smith-Waterman score: 1774; 48.3% identity (73.5% similar) in 592 aa overlap (13-596:22-564)
10 20 30 40 50
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMI
:. : :: .: :. .:..:.:: :: :...:.:
CCDS11 MEAPEEPAPVRGGPEATLEVRGSRCLRLS-----AFREELRALLVLAGPAFLVQLMVFLI
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 YIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVI
..:.::::::::.:: .::::.: .:: ::::: :::::::::.::..:: : ::::::
CCDS11 SFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 LQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLA
:::.::::::::.::::::::::::::::::::::::::: :: ::::.::. ::: : .
CCDS11 LQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 KYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNG
::: ::: :. ::...::..: ::.
CCDS11 KYLLNQG------------------------------------IVLPQIVTGVAANLVNA
180 190
240 250 260 270 280 290
pF1KB9 VANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPF
.::: .. :.::: ::: ::.:::.. ...:.:::. :::: ::.::: .:::::. :
CCDS11 LANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASF
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB9 FSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVR
. ::.:::::.:.::::::.:::: :.:..:.:.::...::.: ..::.: :.:... ::
CCDS11 LRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAASVR
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB9 VGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVL
:: ::::.: ::..:.. ..: : .......:. :...:.:::.:.:.: ::.::.
CCDS11 VGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVV
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB9 PVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLW
:.:.: :.:::. :. ::::::.:.: :: ::.: ::..:::.:: : :.. . .::::
CCDS11 PIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLW
380 390 400 410 420 430
480 490 500 510 520
pF1KB9 LGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQ--RAESTAT-----RPG-PE
:.. :. . .. :... .:.:: : ..:. :.. . .. :. ..: .:: ::
CCDS11 SGIIICTVFQAVCFLGFIIQLNWKKACQQAQVHANLKVNNVPRSGNSALPQDPLHPGCPE
440 450 460 470 480 490
530 540 550 560 570 580
pF1KB9 KAVLSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALG
. : .. : .. : : : .. . . : : .. ..:: ::::.::: :
CCDS11 N--LEGILT-NDVGKTGEPQSDQQMRQE---EPLPEHPQDG--AKLSRKQLVLRRGLLLL
500 510 520 530 540 550
590 600
pF1KB9 AASATLMVGLTVRILATRH
.. :.::. ::
CCDS11 GVFLILLVGILVRFYVRIQ
560 570
602 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:05:42 2016 done: Sat Nov 5 19:05:43 2016
Total Scan time: 3.620 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]