Result of FASTA (omim) for
pFN21AB8608
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8608, 973 aa
1>>>pF1KB8608 973 - 973 aa - 973 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.1071+/-0.000619; mu= -6.1654+/- 0.038
mean_var=442.0366+/-90.481, 0's: 0 Z-trim(115.5): 130 B-trim: 446 in 1/54
Lambda= 0.061002
statistics sampled from 25855 (25972) to 25855 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.631), E-opt: 0.2 (0.305), width: 16
Scan time: 13.930
The best scores are: opt bits E(85289)
NP_001276978 (OMIM: 603344) general vesicular tran ( 973) 6164 558.7 5.3e-158
XP_006714459 (OMIM: 603344) PREDICTED: general ves ( 969) 6119 554.7 8.2e-157
XP_006714460 (OMIM: 603344) PREDICTED: general ves ( 966) 6091 552.3 4.5e-156
NP_003706 (OMIM: 603344) general vesicular transpo ( 962) 5461 496.8 2.2e-139
>>NP_001276978 (OMIM: 603344) general vesicular transpor (973 aa)
initn: 6164 init1: 6164 opt: 6164 Z-score: 2957.6 bits: 558.7 E(85289): 5.3e-158
Smith-Waterman score: 6164; 99.5% identity (99.6% similar) in 973 aa overlap (1-973:1-973)
10 20 30 40 50 60
pF1KB8 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AMEHLIHVLQTDRSGSEIIGYALDTLYNIISNEEEEEVDDVEEENSTRQSEDLGSQFTEI
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
NP_001 AMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEVDDVEEENSTRQSEDLGSQFTEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 QNLLKNNNSNQYFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 QCTNILSQGDKIDRRGSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QCTNILSQGDKIDRRGSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 DIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB8 EVQGETETIIATKTTDVEGRLSALSQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
NP_001 EVQGETETIIATKTTDVEGRLSALLQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB8 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGGQEDED
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
NP_001 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGDQEDED
910 920 930 940 950 960
970
pF1KB8 DESEDPGKDLDHI
:::::::::::::
NP_001 DESEDPGKDLDHI
970
>>XP_006714459 (OMIM: 603344) PREDICTED: general vesicul (969 aa)
initn: 5528 init1: 5528 opt: 6119 Z-score: 2936.3 bits: 554.7 E(85289): 8.2e-157
Smith-Waterman score: 6119; 99.1% identity (99.2% similar) in 973 aa overlap (1-973:1-969)
10 20 30 40 50 60
pF1KB8 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AMEHLIHVLQTDRSGSEIIGYALDTLYNIISNEEEEEVDDVEEENSTRQSEDLGSQFTEI
:::::::::::::: ::::::::::::::::::::::: ::::::::::::::::::
XP_006 AMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEV----EENSTRQSEDLGSQFTEI
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 QNLLKNNNSNQYFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB8 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB8 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB8 QCTNILSQGDKIDRRGSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QCTNILSQGDKIDRRGSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB8 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB8 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB8 DIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB8 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB8 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
780 790 800 810 820 830
850 860 870 880 890 900
pF1KB8 EVQGETETIIATKTTDVEGRLSALSQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
XP_006 EVQGETETIIATKTTDVEGRLSALLQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
840 850 860 870 880 890
910 920 930 940 950 960
pF1KB8 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGGQEDED
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
XP_006 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGDQEDED
900 910 920 930 940 950
970
pF1KB8 DESEDPGKDLDHI
:::::::::::::
XP_006 DESEDPGKDLDHI
960
>>XP_006714460 (OMIM: 603344) PREDICTED: general vesicul (966 aa)
initn: 3269 init1: 3166 opt: 6091 Z-score: 2923.0 bits: 552.3 E(85289): 4.5e-156
Smith-Waterman score: 6091; 98.8% identity (98.9% similar) in 973 aa overlap (1-973:1-966)
10 20 30 40 50 60
pF1KB8 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AMEHLIHVLQTDRSGSEIIGYALDTLYNIISNEEEEEVDDVEEENSTRQSEDLGSQFTEI
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
XP_006 AMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEVDDVEEENSTRQSEDLGSQFTEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 QNLLKNNNSNQYFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 QCTNILSQGDKIDRRGSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_006 QCTNILSQG-------SKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
490 500 510 520 530
550 560 570 580 590 600
pF1KB8 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB8 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB8 DIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB8 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB8 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
780 790 800 810 820 830
850 860 870 880 890 900
pF1KB8 EVQGETETIIATKTTDVEGRLSALSQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
XP_006 EVQGETETIIATKTTDVEGRLSALLQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
840 850 860 870 880 890
910 920 930 940 950 960
pF1KB8 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGGQEDED
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
XP_006 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGDQEDED
900 910 920 930 940 950
970
pF1KB8 DESEDPGKDLDHI
:::::::::::::
XP_006 DESEDPGKDLDHI
960
>>NP_003706 (OMIM: 603344) general vesicular transport f (962 aa)
initn: 3574 init1: 2975 opt: 5461 Z-score: 2623.3 bits: 496.8 E(85289): 2.2e-139
Smith-Waterman score: 6046; 98.4% identity (98.5% similar) in 973 aa overlap (1-973:1-962)
10 20 30 40 50 60
pF1KB8 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AMEHLIHVLQTDRSGSEIIGYALDTLYNIISNEEEEEVDDVEEENSTRQSEDLGSQFTEI
:::::::::::::: ::::::::::::::::::::::: ::::::::::::::::::
NP_003 AMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEV----EENSTRQSEDLGSQFTEI
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 QNLLKNNNSNQYFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPTNP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB8 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB8 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB8 QCTNILSQGDKIDRRGSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
::::::::: ::::::::::::::::::::::::::::::::::::::::::::
NP_003 QCTNILSQG-------SKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAEN
480 490 500 510 520
550 560 570 580 590 600
pF1KB8 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHEL
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB8 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHD
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB8 DIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLG
650 660 670 680 690 700
730 740 750 760 770 780
pF1KB8 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTS
710 720 730 740 750 760
790 800 810 820 830 840
pF1KB8 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSV
770 780 790 800 810 820
850 860 870 880 890 900
pF1KB8 EVQGETETIIATKTTDVEGRLSALSQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
NP_003 EVQGETETIIATKTTDVEGRLSALLQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQ
830 840 850 860 870 880
910 920 930 940 950 960
pF1KB8 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGGQEDED
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
NP_003 TEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGDQEDED
890 900 910 920 930 940
970
pF1KB8 DESEDPGKDLDHI
:::::::::::::
NP_003 DESEDPGKDLDHI
950 960
973 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:34:03 2016 done: Mon Nov 7 03:34:04 2016
Total Scan time: 13.930 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]