Result of FASTA (ccds) for
pFN21AB8483
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8483, 914 aa
1>>>pF1KB8483 914 - 914 aa - 914 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.2422+/-0.00118; mu= -11.3161+/- 0.071
mean_var=635.4864+/-132.135, 0's: 0 Z-trim(115.6): 123 B-trim: 136 in 1/54
Lambda= 0.050877
statistics sampled from 16047 (16149) to 16047 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.496), width: 16
Scan time: 5.800
The best scores are: opt bits E(32554)
CCDS31582.1 INCENP gene_id:3619|Hs108|chr11 ( 914) 5964 453.5 8.4e-127
CCDS44624.1 INCENP gene_id:3619|Hs108|chr11 ( 918) 5946 452.2 2.1e-126
>>CCDS31582.1 INCENP gene_id:3619|Hs108|chr11 (914 aa)
initn: 5964 init1: 5964 opt: 5964 Z-score: 2390.0 bits: 453.5 E(32554): 8.4e-127
Smith-Waterman score: 5964; 100.0% identity (100.0% similar) in 914 aa overlap (1-914:1-914)
10 20 30 40 50 60
pF1KB8 MGTTAPGPIHLLELCDQKLMEFLCNMDNKDLVWLEEIQEEAERMFTREFSKEPELMPKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MGTTAPGPIHLLELCDQKLMEFLCNMDNKDLVWLEEIQEEAERMFTREFSKEPELMPKTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSSQLSSRRLRSKDSVEKLATVVGENGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSSQLSSRRLRSKDSVEKLATVVGENGSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LRRVTRAAAAAAAATMALAAPSSPTPESPTMLTKKPEDNHTQCQLVPVVEIGISERQNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LRRVTRAAAAAAAATMALAAPSSPTPESPTMLTKKPEDNHTQCQLVPVVEIGISERQNAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QHVTQLMSTEPLPRTLSPTPASATAPTSQGIPTSDEESTPKKSKARILESITVSSLMATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QHVTQLMSTEPLPRTLSPTPASATAPTSQGIPTSDEESTPKKSKARILESITVSSLMATP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 QDPKGQGVGTGRSASKLRIAQVSPGPRDSPAFPDSPWRERVLAPILPDNFSTPTGSRTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QDPKGQGVGTGRSASKLRIAQVSPGPRDSPAFPDSPWRERVLAPILPDNFSTPTGSRTDS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QSVRHSPIAPSSPSPQVLAQKYSLVAKQESVVRRASRRLAKKTAEEPAASGRIICHSYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSVRHSPIAPSSPSPQVLAQKYSLVAKQESVVRRASRRLAKKTAEEPAASGRIICHSYLE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 RLLNVEVPQKVGSEQKEPPEEAEPVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLLNVEVPQKVGSEQKEPPEEAEPVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SPETPSAGQQEAKTDQADGPREPPQSARRKRSYKQAVSELDEEQHLEDEELQPPRSKTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPETPSAGQQEAKTDQADGPREPPQSARRKRSYKQAVSELDEEQHLEDEELQPPRSKTPS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 SPCPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKEKERQRLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPCPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKEKERQRLEN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 LRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 QIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 QKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQER
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 RREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 GASKALNVTVDVQSPACTSYQMTPQGHRAPPKINPDNYGMDLNSDDSTDDEAHPRKPIPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GASKALNVTVDVQSPACTSYQMTPQGHRAPPKINPDNYGMDLNSDDSTDDEAHPRKPIPT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB8 WARGTPLSQAIIHQYYHPPNLLELFGTILPLDLEDIFKKSKPRYHKRTSSAVWNSPPLQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 WARGTPLSQAIIHQYYHPPNLLELFGTILPLDLEDIFKKSKPRYHKRTSSAVWNSPPLQG
850 860 870 880 890 900
910
pF1KB8 ARVPSSLAYSLKKH
::::::::::::::
CCDS31 ARVPSSLAYSLKKH
910
>>CCDS44624.1 INCENP gene_id:3619|Hs108|chr11 (918 aa)
initn: 3564 init1: 3564 opt: 5946 Z-score: 2382.8 bits: 452.2 E(32554): 2.1e-126
Smith-Waterman score: 5946; 99.6% identity (99.6% similar) in 918 aa overlap (1-914:1-918)
10 20 30 40 50 60
pF1KB8 MGTTAPGPIHLLELCDQKLMEFLCNMDNKDLVWLEEIQEEAERMFTREFSKEPELMPKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGTTAPGPIHLLELCDQKLMEFLCNMDNKDLVWLEEIQEEAERMFTREFSKEPELMPKTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSSQLSSRRLRSKDSVEKLATVVGENGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSSQLSSRRLRSKDSVEKLATVVGENGSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LRRVTRAAAAAAAATMALAAPSSPTPESPTMLTKKPEDNHTQCQLVPVVEIGISERQNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRRVTRAAAAAAAATMALAAPSSPTPESPTMLTKKPEDNHTQCQLVPVVEIGISERQNAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QHVTQLMSTEPLPRTLSPTPASATAPTSQGIPTSDEESTPKKSKARILESITVSSLMATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QHVTQLMSTEPLPRTLSPTPASATAPTSQGIPTSDEESTPKKSKARILESITVSSLMATP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 QDPKGQGVGTGRSASKLRIAQVSPGPRDSPAFPDSPWRERVLAPILPDNFSTPTGSRTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QDPKGQGVGTGRSASKLRIAQVSPGPRDSPAFPDSPWRERVLAPILPDNFSTPTGSRTDS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 QSVRHSPIAPSSPSPQVLAQKYSLVAKQESVVRRASRRLAKKTAEEPAASGRIICHSYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QSVRHSPIAPSSPSPQVLAQKYSLVAKQESVVRRASRRLAKKTAEEPAASGRIICHSYLE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 RLLNVEVPQKVGSEQKEPPEEAEPVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RLLNVEVPQKVGSEQKEPPEEAEPVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAAS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SPETPSAGQQEAKTDQADGPREPPQSARRKRSYKQAVSELDEEQHLEDEELQPPRSKTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SPETPSAGQQEAKTDQADGPREPPQSARRKRSYKQAVSELDEEQHLEDEELQPPRSKTPS
430 440 450 460 470 480
490 500 510 520 530
pF1KB8 SPCPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPK----EKERQ
::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS44 SPCPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKCSFVEKERQ
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB8 RLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIE
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB8 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRH
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB8 QELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLA
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB8 EQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKA
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB8 KEAAGASKALNVTVDVQSPACTSYQMTPQGHRAPPKINPDNYGMDLNSDDSTDDEAHPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KEAAGASKALNVTVDVQSPACTSYQMTPQGHRAPPKINPDNYGMDLNSDDSTDDEAHPRK
790 800 810 820 830 840
840 850 860 870 880 890
pF1KB8 PIPTWARGTPLSQAIIHQYYHPPNLLELFGTILPLDLEDIFKKSKPRYHKRTSSAVWNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PIPTWARGTPLSQAIIHQYYHPPNLLELFGTILPLDLEDIFKKSKPRYHKRTSSAVWNSP
850 860 870 880 890 900
900 910
pF1KB8 PLQGARVPSSLAYSLKKH
::::::::::::::::::
CCDS44 PLQGARVPSSLAYSLKKH
910
914 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:34:23 2016 done: Sun Nov 6 12:34:24 2016
Total Scan time: 5.800 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]