Result of FASTA (omim) for
pFN21AB8024
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8024, 205 aa
1>>>pF1KB8024 205 - 205 aa - 205 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4088+/-0.000434; mu= 19.0964+/- 0.027
mean_var=93.6162+/-19.640, 0's: 0 Z-trim(112.0): 471 B-trim: 94 in 1/53
Lambda= 0.132556
statistics sampled from 20152 (20726) to 20152 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.611), E-opt: 0.2 (0.243), width: 16
Scan time: 3.990
The best scores are: opt bits E(85289)
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 1330 264.4 8.9e-71
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 1215 242.4 3.7e-64
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 854 173.5 2.5e-43
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 753 154.1 1.5e-37
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 743 152.2 5.6e-37
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 731 149.9 2.8e-36
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 713 146.4 2.9e-35
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 708 145.5 5.6e-35
XP_005264525 (OMIM: 179508) PREDICTED: ras-related ( 173) 707 145.2 5.9e-35
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 699 143.8 1.9e-34
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 643 133.1 3.3e-31
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 643 133.1 3.3e-31
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 640 132.5 5e-31
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 640 132.5 5e-31
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 635 131.6 9.5e-31
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 618 128.3 9e-30
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 618 128.3 9e-30
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 609 126.7 3.3e-29
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 605 125.8 5.1e-29
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 601 125.1 8.5e-29
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 599 124.7 1.1e-28
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 597 124.3 1.4e-28
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 587 122.4 5.5e-28
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 587 122.5 5.9e-28
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 585 121.9 6.7e-28
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 585 122.0 7.3e-28
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 584 121.8 7.8e-28
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 584 121.8 7.8e-28
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 584 121.8 7.8e-28
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 584 121.8 7.8e-28
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 581 121.2 1.1e-27
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 575 120.1 2.7e-27
NP_001161078 (OMIM: 604199) ras-related protein Ra ( 152) 559 116.8 1.8e-26
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 557 116.6 2.8e-26
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 554 116.1 4.3e-26
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 549 115.1 8.3e-26
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 549 115.1 8.4e-26
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 544 114.2 1.6e-25
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 544 114.2 1.6e-25
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 544 114.2 1.6e-25
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 544 114.2 1.6e-25
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 544 114.2 1.8e-25
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 540 113.4 2.8e-25
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 537 112.8 4.1e-25
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 537 112.8 4.1e-25
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 537 112.8 4.1e-25
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 537 112.8 4.1e-25
NP_112586 (OMIM: 605950,615222) ras-related protei ( 229) 521 109.8 3.6e-24
XP_011530601 (OMIM: 605950,615222) PREDICTED: ras- ( 277) 521 109.9 4e-24
NP_004785 (OMIM: 300333) ras-related protein Rab-3 ( 237) 520 109.6 4.1e-24
>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa)
initn: 1330 init1: 1330 opt: 1330 Z-score: 1391.6 bits: 264.4 E(85289): 8.9e-71
Smith-Waterman score: 1330; 100.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
130 140 150 160 170 180
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
:::::::::::::::::::::::::
NP_004 TAGGAEKSNVKIQSTPVKQSGGGCC
190 200
>>NP_112243 (OMIM: 612565) ras-related protein Rab-1B [H (201 aa)
initn: 1119 init1: 1119 opt: 1215 Z-score: 1272.9 bits: 242.4 E(85289): 3.7e-64
Smith-Waterman score: 1215; 93.1% identity (97.0% similar) in 202 aa overlap (4-205:1-201)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
::::::::::::::::::::::::::::::::::::::. ::::::::::::::::::::
NP_112 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
::::: ::::::::: :::::::::::::::::::::::::::.::::::::::::::::
NP_112 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
120 130 140 150 160 170
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
..:: :. :.::.::::: .:::::
NP_112 ASGG-ERPNLKIDSTPVKPAGGGCC
180 190 200
>>XP_016873867 (OMIM: 612565) PREDICTED: ras-related pro (237 aa)
initn: 961 init1: 854 opt: 854 Z-score: 899.0 bits: 173.5 E(85289): 2.5e-43
Smith-Waterman score: 1099; 78.7% identity (82.1% similar) in 235 aa overlap (4-202:1-234)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
::::::::::::::::::::::::::::::::::::::. ::::::::::::::::::::
XP_016 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL
60 70 80 90 100 110
130 140
pF1KB8 LVGNKCDLTTKKVVDYTTAK------------------------------------EFAD
::::: ::::::::: :::: ::::
XP_016 LVGNKSDLTTKKVVDNTTAKVADGPVCPGSGRWGLLPLTCSPLLFSPLLFSPLPCQEFAD
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB8 SLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC
:::::::::::::::::::.::::::::::::::::..:: :. :.::.::::: .::
XP_016 SLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG-ERPNLKIDSTPVKPAGGGC
180 190 200 210 220 230
pF1KB8 C
XP_016 C
>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa)
initn: 749 init1: 749 opt: 753 Z-score: 795.2 bits: 154.1 E(85289): 1.5e-37
Smith-Waterman score: 753; 55.1% identity (84.2% similar) in 196 aa overlap (4-199:1-196)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
: :::::::::::::::::.:.:.::..:... ..:::::.:::::::::::: :
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
:::::::::::::::::..::::: ::..:::.:...::.:...:...:...:: .:.:.
NP_005 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
..:::::.. :. :. ....: . :: :.::::: :::..:.:.: .:: .:
NP_005 ILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL
120 130 140 150 160 170
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
... . :: .. :: .:
NP_005 EGNSPQGSNQGVKITPDQQKRSSFFRCVLL
180 190 200
>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa)
initn: 730 init1: 730 opt: 743 Z-score: 784.9 bits: 152.2 E(85289): 5.6e-37
Smith-Waterman score: 743; 53.9% identity (84.5% similar) in 206 aa overlap (4-205:1-204)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
: :::::::::::::::::.:::.::..:... ..:::::.:::::::::::: :
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
:::::::::::::::::..::::: ::..:::.:...::.:.:.:...:...:: .:...
NP_057 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERM
60 70 80 90 100 110
130 140 150 160 170
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI----KKRM
..:::::.. :. :. ....: . :: :::::::...:::..:.:.: .: ...:
NP_057 ILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKM
120 130 140 150 160 170
180 190 200
pF1KB8 GPGATAGGAEKSNVKIQSTPVKQSGGGCC
. . .::.. . ::: . :... :
NP_057 NDSNSAGAG--GPVKITENRSKKTSFFRCSLL
180 190 200
>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa)
initn: 727 init1: 727 opt: 731 Z-score: 772.3 bits: 149.9 E(85289): 2.8e-36
Smith-Waterman score: 731; 59.5% identity (88.4% similar) in 173 aa overlap (4-176:1-173)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
: :::::::::::::::::.:.:.::..:... ..:::::.:::::::::::: :
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
:::::::::::::::::..::::: ::..:::.:...::.:...:...:...:: .:.:.
XP_011 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
..:::::.. :. :. ....: . :: :.::::: :::..:.:.: .:: .:
XP_011 ILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL
120 130 140 150 160 170
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
XP_011 GQKDNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS
180 190 200 210
>>NP_002861 (OMIM: 602672) ras-related protein Rab-13 is (203 aa)
initn: 695 init1: 695 opt: 713 Z-score: 754.0 bits: 146.4 E(85289): 2.9e-35
Smith-Waterman score: 713; 52.2% identity (81.1% similar) in 201 aa overlap (4-204:1-200)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
: ::.::::::::::::::.::..:::.:.....::::::.::::::....:: :
NP_002 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
:::.:::::::::.:::..::::: :::.:::.::..::.:...:.. : . :: .:..:
NP_002 KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
:.:::::. .:. :. : ..: :: :.:::::.. ::...: ..: .: . : :
NP_002 LLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG-GR
120 130 140 150 160 170
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
.:...: .: :.. . :
NP_002 RSGNGNKPPSTDLKTCDKKNTNKCSLG
180 190 200
>>NP_057215 (OMIM: 612672) ras-related protein Rab-10 [H (200 aa)
initn: 723 init1: 708 opt: 708 Z-score: 748.9 bits: 145.5 E(85289): 5.6e-35
Smith-Waterman score: 708; 58.9% identity (88.1% similar) in 168 aa overlap (8-175:6-173)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
:: ::::::::::::::.:.:.::.::... ..:::::.::::.:.::.:: :
NP_057 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
:::::::::::::.:::.:::::: ::..:::.:. .::.:...::..::..:.:.:...
NP_057 KLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
:.:::::. :.:: ....: :: :.::::: :.:..:.:.: .: ..
NP_057 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE
120 130 140 150 160 170
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
NP_057 PNSENVDISSGGGVTGWKSKCC
180 190 200
>>XP_005264525 (OMIM: 179508) PREDICTED: ras-related pro (173 aa)
initn: 1100 init1: 707 opt: 707 Z-score: 748.5 bits: 145.2 E(85289): 5.9e-35
Smith-Waterman score: 1040; 84.4% identity (84.4% similar) in 205 aa overlap (1-205:1-173)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
:::: ::::::::::::::::::::::::
XP_005 KLQI--------------------------------ESFNNVKQWLQEIDRYASENVNKL
70 80
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
90 100 110 120 130 140
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
:::::::::::::::::::::::::
XP_005 TAGGAEKSNVKIQSTPVKQSGGGCC
150 160 170
>>NP_006852 (OMIM: 604199) ras-related protein Rab-35 is (201 aa)
initn: 694 init1: 551 opt: 699 Z-score: 739.6 bits: 143.8 E(85289): 1.9e-34
Smith-Waterman score: 699; 54.0% identity (77.2% similar) in 202 aa overlap (4-205:1-201)
10 20 30 40 50 60
pF1KB8 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
: .::.:::::.::::::::: :::::::.:.. :::.::::::::::.:..:. .
NP_006 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
::::::::::::::::::.::::.::.:::::::. ::: :::.::.::.. ..: ..
NP_006 KLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
::::: : .:::. : .:: ..:: ..:::::. .:::. : .. . . .
NP_006 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL
120 130 140 150 160 170
190 200
pF1KB8 TAGGAEKSNVKIQSTPVKQSGGGCC
. ...: .. : .. ::
NP_006 AKQQQQQQNDVVKLTKNSKRKKRCC
180 190 200
205 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:33:06 2016 done: Sun Nov 6 23:33:07 2016
Total Scan time: 3.990 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]