Result of FASTA (omim) for
pFN21AB7989
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7989, 442 aa
1>>>pF1KB7989 442 - 442 aa - 442 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.0884+/-0.000422; mu= -7.7626+/- 0.026
mean_var=377.8355+/-79.278, 0's: 0 Z-trim(122.3): 15 B-trim: 1297 in 1/56
Lambda= 0.065982
statistics sampled from 40220 (40235) to 40220 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.472), width: 16
Scan time: 11.510
The best scores are: opt bits E(85289)
NP_848643 (OMIM: 614428) transcription factor AP-2 ( 442) 2975 297.0 6.6e-80
XP_016856628 (OMIM: 614428) PREDICTED: transcripti ( 356) 2355 237.9 3.3e-62
XP_011513139 (OMIM: 169100,601601,617035) PREDICTE ( 469) 1790 184.2 6.2e-46
XP_016866723 (OMIM: 169100,601601,617035) PREDICTE ( 503) 1790 184.2 6.5e-46
XP_016866722 (OMIM: 169100,601601,617035) PREDICTE ( 515) 1790 184.3 6.6e-46
NP_003212 (OMIM: 169100,601601,617035) transcripti ( 460) 1737 179.2 2e-44
NP_001027451 (OMIM: 107580,113620) transcription f ( 431) 1539 160.3 9.1e-39
NP_001035890 (OMIM: 107580,113620) transcription f ( 433) 1539 160.3 9.1e-39
NP_003211 (OMIM: 107580,113620) transcription fact ( 437) 1539 160.3 9.2e-39
XP_006715238 (OMIM: 107580,113620) PREDICTED: tran ( 482) 1539 160.3 9.9e-39
XP_016866721 (OMIM: 107580,113620) PREDICTED: tran ( 519) 1539 160.4 1e-38
XP_011513135 (OMIM: 107580,113620) PREDICTED: tran ( 387) 1479 154.5 4.4e-37
XP_016866724 (OMIM: 169100,601601,617035) PREDICTE ( 307) 1414 148.3 2.7e-35
NP_003213 (OMIM: 601602) transcription factor AP-2 ( 450) 1367 143.9 8e-34
NP_758438 (OMIM: 610161) transcription factor AP-2 ( 452) 1069 115.6 2.8e-25
>>NP_848643 (OMIM: 614428) transcription factor AP-2-eps (442 aa)
initn: 2975 init1: 2975 opt: 2975 Z-score: 1555.6 bits: 297.0 E(85289): 6.6e-80
Smith-Waterman score: 2975; 100.0% identity (100.0% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KB7 MLVHTYSAMERPDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 MLVHTYSAMERPDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QPPLPYGQAPDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 QPPLPYGQAPDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 ARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DQSVIKKVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 DQSVIKKVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 VQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 EGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 EGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 QDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 QDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMF
370 380 390 400 410 420
430 440
pF1KB7 LSSVGSGHGETKASEKDAKHRK
::::::::::::::::::::::
NP_848 LSSVGSGHGETKASEKDAKHRK
430 440
>>XP_016856628 (OMIM: 614428) PREDICTED: transcription f (356 aa)
initn: 2355 init1: 2355 opt: 2355 Z-score: 1237.9 bits: 237.9 E(85289): 3.3e-62
Smith-Waterman score: 2355; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KB7 MLVHTYSAMERPDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLVHTYSAMERPDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QPPLPYGQAPDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPPLPYGQAPDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 ARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DQSVIKKVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQSVIKKVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 EGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMA
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKSARSLQT
310 320 330 340 350
370 380 390 400 410 420
pF1KB7 QDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMF
>>XP_011513139 (OMIM: 169100,601601,617035) PREDICTED: t (469 aa)
initn: 1573 init1: 1243 opt: 1790 Z-score: 945.6 bits: 184.2 E(85289): 6.2e-46
Smith-Waterman score: 1790; 64.4% identity (80.9% similar) in 461 aa overlap (1-442:28-469)
10 20 30
pF1KB7 MLVHTYSAMERPDGLGAAAGG-ARLSSLPQAAY
:::::::.:.: ::. . .. ..:.:. :. :
XP_011 MHSPPRDQAAIMLWKLVENVKYEDIYEMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPY
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 GPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPLAQ
. :::: :::.. .:::::::::: :::: :. : . :. .:::. : :: :
XP_011 SSAPPLSHTPSS----DFQPPYFPPPY--QPLPYHQSQDP---YSHV-NDPYS-LNPLHQ
70 80 90 100
100 110 120 130 140
pF1KB7 PQPPQAAWAAPRAAARAHEEPPGLLAPPARAL----GLDPRRDYATAVPR---LLHGLAD
:: : :. : .. : .:: : :: :::::::: . : : :::.
XP_011 PQ--QHPWGQ-RQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHS-VRRPDVLLHSAHH
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB7 GAH-GLADAPLGLPGLAAAPGLEDLQAMDEP---GMSLLDQSVIKKVPIPSKASSLSALS
: :..:. :.: ::. ::.::.:.... ::.:::::::::::.: : :...:
XP_011 GLDAGMGDS-LSLHGLGH-PGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPK--SVTSLM
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB7 LAKDSLVGGIT-NPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVL
. ::...::.. : ::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVL
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB7 RRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFP
:::::::::: ::::::::::::::::::::::::::::::::::::::::::.::::::
XP_011 RRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFP
290 300 310 320 330 340
330 340 350 360 370 380
pF1KB7 AKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQ
:::..::: :::.::..:::::.::::.::.::::.::.::::.:.:::::. :::::.:
XP_011 AKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQ
350 360 370 380 390 400
390 400 410 420 430
pF1KB7 SCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSVG-----SGHGE-TKAS
::::::::::::::.:::::::::.:::: :.:::.:::::... ::.: .:..
XP_011 SCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTG
410 420 430 440 450 460
440
pF1KB7 EKDAKHRK
.:. ::::
XP_011 DKEEKHRK
>>XP_016866723 (OMIM: 169100,601601,617035) PREDICTED: t (503 aa)
initn: 1573 init1: 1243 opt: 1790 Z-score: 945.2 bits: 184.2 E(85289): 6.5e-46
Smith-Waterman score: 1790; 64.4% identity (80.9% similar) in 461 aa overlap (1-442:62-503)
10 20
pF1KB7 MLVHTYSAMERPDGLGAAAGG-ARLSSLPQ
:::::::.:.: ::. . .. ..:.:. :
XP_016 SGSLWRMSSTKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQ
40 50 60 70 80 90
30 40 50 60 70 80
pF1KB7 AAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAP
. :. :::: :::.. .:::::::::: :::: :. : . :. .:::. : :
XP_016 GPYSSAPPLSHTPSS----DFQPPYFPPPY--QPLPYHQSQDP---YSHV-NDPYS-LNP
100 110 120 130 140
90 100 110 120 130 140
pF1KB7 LAQPQPPQAAWAAPRAAARAHEEPPGLLAPPARAL----GLDPRRDYATAVPR---LLHG
: ::: : :. : .. : .:: : :: :::::::: . : : :::.
XP_016 LHQPQ--QHPWGQ-RQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHS-VRRPDVLLHS
150 160 170 180 190
150 160 170 180 190
pF1KB7 LADGAH-GLADAPLGLPGLAAAPGLEDLQAMDEP---GMSLLDQSVIKKVPIPSKASSLS
: :..:. :.: ::. ::.::.:.... ::.:::::::::::.: : :..
XP_016 AHHGLDAGMGDS-LSLHGLGH-PGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPK--SVT
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB7 ALSLAKDSLVGGIT-NPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLG
.: . ::...::.. : :::::::::::::::::::::::::::::::::::::::::::
XP_016 SLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB7 GVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCET
::::::::::::: ::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 GVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICET
320 330 340 350 360 370
320 330 340 350 360 370
pF1KB7 EFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALILEP
::::::..::: :::.::..:::::.::::.::.::::.::.::::.:.:::::. ::::
XP_016 EFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEP
380 390 400 410 420 430
380 390 400 410 420 430
pF1KB7 GVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSVG-----SGHGE-T
:.:::::::::::::::.:::::::::.:::: :.:::.:::::... ::.: .
XP_016 GIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGS
440 450 460 470 480 490
440
pF1KB7 KASEKDAKHRK
:...:. ::::
XP_016 KTGDKEEKHRK
500
>>XP_016866722 (OMIM: 169100,601601,617035) PREDICTED: t (515 aa)
initn: 1573 init1: 1243 opt: 1790 Z-score: 945.1 bits: 184.3 E(85289): 6.6e-46
Smith-Waterman score: 1790; 64.4% identity (80.9% similar) in 461 aa overlap (1-442:74-515)
10 20
pF1KB7 MLVHTYSAMERPDGLGAAAGG-ARLSSLPQ
:::::::.:.: ::. . .. ..:.:. :
XP_016 SGSLWRMSSTKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQ
50 60 70 80 90 100
30 40 50 60 70 80
pF1KB7 AAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAP
. :. :::: :::.. .:::::::::: :::: :. : . :. .:::. : :
XP_016 GPYSSAPPLSHTPSS----DFQPPYFPPPY--QPLPYHQSQDP---YSHV-NDPYS-LNP
110 120 130 140 150
90 100 110 120 130 140
pF1KB7 LAQPQPPQAAWAAPRAAARAHEEPPGLLAPPARAL----GLDPRRDYATAVPR---LLHG
: ::: : :. : .. : .:: : :: :::::::: . : : :::.
XP_016 LHQPQ--QHPWGQ-RQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHS-VRRPDVLLHS
160 170 180 190 200
150 160 170 180 190
pF1KB7 LADGAH-GLADAPLGLPGLAAAPGLEDLQAMDEP---GMSLLDQSVIKKVPIPSKASSLS
: :..:. :.: ::. ::.::.:.... ::.:::::::::::.: : :..
XP_016 AHHGLDAGMGDS-LSLHGLGH-PGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPK--SVT
210 220 230 240 250 260
200 210 220 230 240 250
pF1KB7 ALSLAKDSLVGGIT-NPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLG
.: . ::...::.. : :::::::::::::::::::::::::::::::::::::::::::
XP_016 SLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLG
270 280 290 300 310 320
260 270 280 290 300 310
pF1KB7 GVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCET
::::::::::::: ::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 GVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICET
330 340 350 360 370 380
320 330 340 350 360 370
pF1KB7 EFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALILEP
::::::..::: :::.::..:::::.::::.::.::::.::.::::.:.:::::. ::::
XP_016 EFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEP
390 400 410 420 430 440
380 390 400 410 420 430
pF1KB7 GVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSVG-----SGHGE-T
:.:::::::::::::::.:::::::::.:::: :.:::.:::::... ::.: .
XP_016 GIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGS
450 460 470 480 490 500
440
pF1KB7 KASEKDAKHRK
:...:. ::::
XP_016 KTGDKEEKHRK
510
>>NP_003212 (OMIM: 169100,601601,617035) transcription f (460 aa)
initn: 1510 init1: 1243 opt: 1737 Z-score: 918.5 bits: 179.2 E(85289): 2e-44
Smith-Waterman score: 1737; 63.9% identity (80.5% similar) in 452 aa overlap (10-442:28-460)
10 20 30 40
pF1KB7 MLVHTYSAMERPDGLGAAAGG-ARLSSLPQAAYGPAPPLCHT
.: ::. . .. ..:.:. :. :. :::: ::
NP_003 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 PAATAAAEFQPPYFPPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWA
:.. .:::::::::: :::: :. : . :. .:::. : :: ::: : :.
NP_003 PSS----DFQPPYFPPPY--QPLPYHQSQDP---YSHV-NDPYS-LNPLHQPQ--QHPWG
70 80 90 100
110 120 130 140 150
pF1KB7 APRAAARAHEEPPGLLAPPARAL----GLDPRRDYATAVPR---LLHGLADGAH-GLADA
: .. : .:: : :: :::::::: . : : :::. : :..:.
NP_003 Q-RQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHS-VRRPDVLLHSAHHGLDAGMGDS
110 120 130 140 150 160
160 170 180 190 200 210
pF1KB7 PLGLPGLAAAPGLEDLQAMDEP---GMSLLDQSVIKKVPIPSKASSLSALSLAKDSLVGG
:.: ::. ::.::.:.... ::.:::::::::::.: : :...: . ::...::
NP_003 -LSLHGLGH-PGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPK--SVTSLMMNKDGFLGG
170 180 190 200 210 220
220 230 240 250 260
pF1KB7 IT-NPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGG
.. : :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGG
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB7 RCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLC
: ::::::::::::::::::::::::::::::::::::::::::.:::::::::..:::
NP_003 RSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLN
290 300 310 320 330 340
330 340 350 360 370 380
pF1KB7 RQHADPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLI
:::.::..:::::.::::.::.::::.::.::::.:.:::::. :::::.::::::::::
NP_003 RQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLI
350 360 370 380 390 400
390 400 410 420 430 440
pF1KB7 THGFGGPAICAALTAFQNYLLESLKGLDKMFLSSVG-----SGHGE-TKASEKDAKHRK
:::::.:::::::::.:::: :.:::.:::::... ::.: .:...:. ::::
NP_003 THGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
410 420 430 440 450 460
>>NP_001027451 (OMIM: 107580,113620) transcription facto (431 aa)
initn: 1613 init1: 1256 opt: 1539 Z-score: 817.0 bits: 160.3 E(85289): 9.1e-39
Smith-Waterman score: 1711; 62.2% identity (78.7% similar) in 455 aa overlap (1-442:1-431)
10 20 30 40 50
pF1KB7 MLVHTYSAMERPDGLGAAAGGARLSSLP---QAAYGPAPPLCHTPAATAAAEFQPPYFPP
::::..:::.: :: .. : ::: .: :. : :::: ::: : .::::::::
NP_001 MLVHSFSAMDRHDG--TSNGTARLPQLGTVGQSPYTSAPPLSHTPNA----DFQPPYFPP
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 PYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPL-AQPQPPQAAWAAPRAAARAHEEPPGL
:: :: : .: : . :. .:::. : :: ::::: . .: . : . . ::
NP_001 PY-QPIYPQSQDP-----YSHV-NDPYS-LNPLHAQPQPQHPGWPGQR-----QSQESGL
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 LAP----PARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAM
: : . :::::::: :::: . ::.: :.. .: : .:.. .
NP_001 LHTHRGLPHQLSGLDPRRDYRRH-EDLLHGPHALSSGLGD--LSIHSLPHA--IEEVPHV
110 120 130 140 150
180 190 200 210 220
pF1KB7 DEPGMSLLDQSVIKKVPIP-SKASS--LSALSLAKDSLVGGITNPGEVFCSVPGRLSLLS
..::... ::.:::: :. ::..: .::. . ::.: ::..::.::::::::::::::
NP_001 EDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLS
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 STSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRK
:::::::::.::::::::::::::::::::::::::::::: :::.:.::::::::::::
NP_001 STSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRK
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB7 AANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAK
::::::::::::::::::::::::::::::::::.::.: :::.::.: .::.::::.:
NP_001 AANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATK
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB7 QICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYL
::::::.::.:::::::::::: :::::.:::::::.::.::::.::.:::.::.::::
NP_001 QICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYL
340 350 360 370 380 390
410 420 430 440
pF1KB7 LESLKGLDKMFLSSVGSGHGET--KASEKDAKHRK
:.::..:::.::. ..: .. :.:.:. ::::
NP_001 TEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>NP_001035890 (OMIM: 107580,113620) transcription facto (433 aa)
initn: 1544 init1: 1256 opt: 1539 Z-score: 817.0 bits: 160.3 E(85289): 9.1e-39
Smith-Waterman score: 1661; 61.9% identity (78.3% similar) in 446 aa overlap (10-442:12-433)
10 20 30 40 50
pF1KB7 MLVHTYSAMERPDGLGAAAGGARLSSLP---QAAYGPAPPLCHTPAATAAAEFQPPYF
.: : :.. : ::: .: :. : :::: ::: : .::::::
NP_001 MSILAKMGDWQDRHD--GTSNGTARLPQLGTVGQSPYTSAPPLSHTPNA----DFQPPYF
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 PPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPL-AQPQPPQAAWAAPRAAARAHEEPP
:::: :: : .: : . :. .:::. : :: ::::: . .: . : . .
NP_001 PPPY-QPIYPQSQDP-----YSHV-NDPYS-LNPLHAQPQPQHPGWPGQR-----QSQES
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 GLLAP----PARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQ
::: : . :::::::: :::: . ::.: :.. .: : .:..
NP_001 GLLHTHRGLPHQLSGLDPRRDYRRH-EDLLHGPHALSSGLGD--LSIHSLPHA--IEEVP
110 120 130 140 150
180 190 200 210 220
pF1KB7 AMDEPGMSLLDQSVIKKVPIP-SKASS--LSALSLAKDSLVGGITNPGEVFCSVPGRLSL
...::... ::.:::: :. ::..: .::. . ::.: ::..::.::::::::::::
NP_001 HVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSL
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 LSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGR
:::::::::::.::::::::::::::::::::::::::::::: :::.:.::::::::::
NP_001 LSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGR
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB7 RKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLA
::::::::::::::::::::::::::::::::::::.::.: :::.::.: .::.::::
NP_001 RKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLA
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB7 AKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQN
.:::::::.::.:::::::::::: :::::.:::::::.::.::::.::.:::.::.::
NP_001 TKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQN
340 350 360 370 380 390
410 420 430 440
pF1KB7 YLLESLKGLDKMFLSSVGSGHGET--KASEKDAKHRK
:: :.::..:::.::. ..: .. :.:.:. ::::
NP_001 YLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>NP_003211 (OMIM: 107580,113620) transcription factor A (437 aa)
initn: 1544 init1: 1256 opt: 1539 Z-score: 816.9 bits: 160.3 E(85289): 9.2e-39
Smith-Waterman score: 1661; 61.9% identity (78.3% similar) in 446 aa overlap (10-442:16-437)
10 20 30 40 50
pF1KB7 MLVHTYSAMERPDGLGAAAGGARLSSLP---QAAYGPAPPLCHTPAATAAAEFQ
.: : :.. : ::: .: :. : :::: ::: : .::
NP_003 MLWKLTDNIKYEDCEDRHD--GTSNGTARLPQLGTVGQSPYTSAPPLSHTPNA----DFQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 PPYFPPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPL-AQPQPPQAAWAAPRAAARAH
:::::::: :: : .: : . :. .:::. : :: ::::: . .: . : .
NP_003 PPYFPPPY-QPIYPQSQDP-----YSHV-NDPYS-LNPLHAQPQPQHPGWPGQR-----Q
60 70 80 90 100
120 130 140 150 160
pF1KB7 EEPPGLLAP----PARALGLDPRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGL
. ::: : . :::::::: :::: . ::.: :.. .: : .
NP_003 SQESGLLHTHRGLPHQLSGLDPRRDYRRH-EDLLHGPHALSSGLGD--LSIHSLPHA--I
110 120 130 140 150
170 180 190 200 210 220
pF1KB7 EDLQAMDEPGMSLLDQSVIKKVPIP-SKASS--LSALSLAKDSLVGGITNPGEVFCSVPG
:.. ...::... ::.:::: :. ::..: .::. . ::.: ::..::.::::::::
NP_003 EEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPG
160 170 180 190 200 210
230 240 250 260 270 280
pF1KB7 RLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNL
:::::::::::::::.::::::::::::::::::::::::::::::: :::.:.::::::
NP_003 RLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNL
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB7 PAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKS
::::::::::::::::::::::::::::::::::::::::.::.: :::.::.: .::.
NP_003 PAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKN
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB7 MLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALT
::::.:::::::.::.:::::::::::: :::::.:::::::.::.::::.::.:::.:
NP_003 MLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVT
340 350 360 370 380 390
410 420 430 440
pF1KB7 AFQNYLLESLKGLDKMFLSSVGSGHGET--KASEKDAKHRK
:.:::: :.::..:::.::. ..: .. :.:.:. ::::
NP_003 ALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>XP_006715238 (OMIM: 107580,113620) PREDICTED: transcri (482 aa)
initn: 1544 init1: 1256 opt: 1539 Z-score: 816.4 bits: 160.3 E(85289): 9.9e-39
Smith-Waterman score: 1661; 61.9% identity (78.3% similar) in 446 aa overlap (10-442:61-482)
10 20 30
pF1KB7 MLVHTYSAMERPDGLGAAAGGARLSSLP---QAAYGPAP
.: : :.. : ::: .: :. : ::
XP_006 SACRAESPTSARTRSQAAPTRYARPPLHPEDRHD--GTSNGTARLPQLGTVGQSPYTSAP
40 50 60 70 80
40 50 60 70 80 90
pF1KB7 PLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPDAAAAFPHLAGDPYGGLAPL-AQPQP
:: ::: : .:::::::::: :: : .: : . :. .:::. : :: :::::
XP_006 PLSHTPNA----DFQPPYFPPPY-QPIYPQSQDP-----YSHV-NDPYS-LNPLHAQPQP
90 100 110 120 130
100 110 120 130 140 150
pF1KB7 PQAAWAAPRAAARAHEEPPGLLAP----PARALGLDPRRDYATAVPRLLHGLADGAHGLA
. .: . : . . ::: : . :::::::: :::: . ::.
XP_006 QHPGWPGQR-----QSQESGLLHTHRGLPHQLSGLDPRRDYRRH-EDLLHGPHALSSGLG
140 150 160 170 180 190
160 170 180 190 200
pF1KB7 DAPLGLPGLAAAPGLEDLQAMDEPGMSLLDQSVIKKVPIP-SKASS--LSALSLAKDSLV
: :.. .: : .:.. ...::... ::.:::: :. ::..: .::. . ::.:
XP_006 D--LSIHSLPHA--IEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLF
200 210 220 230 240
210 220 230 240 250 260
pF1KB7 GGITNPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNG
::..::.:::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_006 GGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNG
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB7 GRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYL
:: :::.:.::::::::::::::::::::::::::::::::::::::::::::::.::.:
XP_006 GRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFL
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB7 CRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSL
:::.::.: .::.::::.:::::::.::.:::::::::::: :::::.:::::::.:
XP_006 NRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNL
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB7 ITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSVGSGHGET--KASEKDAKHRK
:.::::.::.:::.::.:::: :.::..:::.::. ..: .. :.:.:. ::::
XP_006 ISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
430 440 450 460 470 480
442 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:47:03 2016 done: Mon Nov 7 16:47:04 2016
Total Scan time: 11.510 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]