Result of FASTA (omim) for
pFN21AB7806
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7806, 593 aa
1>>>pF1KB7806 593 - 593 aa - 593 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7412+/-0.000351; mu= 2.0977+/- 0.022
mean_var=336.7953+/-68.097, 0's: 0 Z-trim(125.7): 51 B-trim: 1608 in 1/57
Lambda= 0.069886
statistics sampled from 49879 (49943) to 49879 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.829), E-opt: 0.2 (0.586), width: 16
Scan time: 14.510
The best scores are: opt bits E(85289)
XP_005259570 (OMIM: 603265) PREDICTED: AT-rich int ( 593) 3939 410.7 7e-114
NP_005215 (OMIM: 603265) AT-rich interactive domai ( 593) 3939 410.7 7e-114
XP_016881934 (OMIM: 603265) PREDICTED: AT-rich int ( 593) 3939 410.7 7e-114
XP_005259571 (OMIM: 603265) PREDICTED: AT-rich int ( 593) 3939 410.7 7e-114
XP_016881936 (OMIM: 603265) PREDICTED: AT-rich int ( 342) 2177 232.8 1.5e-60
XP_016881935 (OMIM: 603265) PREDICTED: AT-rich int ( 342) 2177 232.8 1.5e-60
NP_001294868 (OMIM: 612457) AT-rich interactive do ( 561) 1179 132.4 4e-30
NP_006456 (OMIM: 612457) AT-rich interactive domai ( 560) 1170 131.5 7.4e-30
XP_016866598 (OMIM: 135900,614556,614562) PREDICTE (1539) 360 50.3 5.7e-05
XP_016866596 (OMIM: 135900,614556,614562) PREDICTE (2256) 360 50.5 7.4e-05
XP_005267126 (OMIM: 135900,614556,614562) PREDICTE (2289) 360 50.5 7.5e-05
XP_016866593 (OMIM: 135900,614556,614562) PREDICTE (2316) 360 50.5 7.5e-05
XP_016866592 (OMIM: 135900,614556,614562) PREDICTE (2326) 360 50.5 7.5e-05
NP_059989 (OMIM: 135900,614556,614562) AT-rich int (2236) 358 50.3 8.4e-05
NP_065783 (OMIM: 135900,614556,614562) AT-rich int (2249) 358 50.3 8.5e-05
XP_016866595 (OMIM: 135900,614556,614562) PREDICTE (2263) 358 50.3 8.5e-05
XP_016866594 (OMIM: 135900,614556,614562) PREDICTE (2306) 358 50.3 8.6e-05
XP_011534290 (OMIM: 135900,614556,614562) PREDICTE (1336) 350 49.2 0.0001
XP_016866597 (OMIM: 135900,614556,614562) PREDICTE (1551) 350 49.3 0.00011
XP_011534286 (OMIM: 135900,614556,614562) PREDICTE (2359) 350 49.5 0.00015
NP_624361 (OMIM: 603024,614607) AT-rich interactiv (2068) 347 49.1 0.00017
NP_006006 (OMIM: 603024,614607) AT-rich interactiv (2285) 347 49.2 0.00018
>>XP_005259570 (OMIM: 603265) PREDICTED: AT-rich interac (593 aa)
initn: 3939 init1: 3939 opt: 3939 Z-score: 2165.5 bits: 410.7 E(85289): 7e-114
Smith-Waterman score: 3939; 99.8% identity (100.0% similar) in 593 aa overlap (1-593:1-593)
10 20 30 40 50 60
pF1KB7 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 PTPTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
:::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_005 PTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
550 560 570 580 590
>>NP_005215 (OMIM: 603265) AT-rich interactive domain-co (593 aa)
initn: 3939 init1: 3939 opt: 3939 Z-score: 2165.5 bits: 410.7 E(85289): 7e-114
Smith-Waterman score: 3939; 99.8% identity (100.0% similar) in 593 aa overlap (1-593:1-593)
10 20 30 40 50 60
pF1KB7 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 PTPTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
:::::::::::::::.:::::::::::::::::::::::::::::::::::::
NP_005 PTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
550 560 570 580 590
>>XP_016881934 (OMIM: 603265) PREDICTED: AT-rich interac (593 aa)
initn: 3939 init1: 3939 opt: 3939 Z-score: 2165.5 bits: 410.7 E(85289): 7e-114
Smith-Waterman score: 3939; 99.8% identity (100.0% similar) in 593 aa overlap (1-593:1-593)
10 20 30 40 50 60
pF1KB7 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 PTPTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
:::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_016 PTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
550 560 570 580 590
>>XP_005259571 (OMIM: 603265) PREDICTED: AT-rich interac (593 aa)
initn: 3939 init1: 3939 opt: 3939 Z-score: 2165.5 bits: 410.7 E(85289): 7e-114
Smith-Waterman score: 3939; 99.8% identity (100.0% similar) in 593 aa overlap (1-593:1-593)
10 20 30 40 50 60
pF1KB7 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQLYELDGDPK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB7 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB7 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISMSVEINGIMYTGVLFAQPPA
490 500 510 520 530 540
550 560 570 580 590
pF1KB7 PTPTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
:::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_005 PTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
550 560 570 580 590
>>XP_016881936 (OMIM: 603265) PREDICTED: AT-rich interac (342 aa)
initn: 2177 init1: 2177 opt: 2177 Z-score: 1208.3 bits: 232.8 E(85289): 1.5e-60
Smith-Waterman score: 2177; 99.7% identity (100.0% similar) in 342 aa overlap (252-593:1-342)
230 240 250 260 270 280
pF1KB7 DWTYEEQFKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTE
::::::::::::::::::::::::::::::
XP_016 MQKRGTPVNRIPIMAKQVLDLFMLYVLVTE
10 20 30
290 300 310 320 330 340
pF1KB7 KGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAA
40 50 60 70 80 90
350 360 370 380 390 400
pF1KB7 IDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEE
100 110 120 130 140 150
410 420 430 440 450 460
pF1KB7 DSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEK
160 170 180 190 200 210
470 480 490 500 510 520
pF1KB7 KMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISM
220 230 240 250 260 270
530 540 550 560 570 580
pF1KB7 SVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLS
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_016 SVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLS
280 290 300 310 320 330
590
pF1KB7 TPSTSTSNNSLP
::::::::::::
XP_016 TPSTSTSNNSLP
340
>>XP_016881935 (OMIM: 603265) PREDICTED: AT-rich interac (342 aa)
initn: 2177 init1: 2177 opt: 2177 Z-score: 1208.3 bits: 232.8 E(85289): 1.5e-60
Smith-Waterman score: 2177; 99.7% identity (100.0% similar) in 342 aa overlap (252-593:1-342)
230 240 250 260 270 280
pF1KB7 DWTYEEQFKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTE
::::::::::::::::::::::::::::::
XP_016 MQKRGTPVNRIPIMAKQVLDLFMLYVLVTE
10 20 30
290 300 310 320 330 340
pF1KB7 KGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAA
40 50 60 70 80 90
350 360 370 380 390 400
pF1KB7 IDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLAASTNGSSITPAPKIKKEE
100 110 120 130 140 150
410 420 430 440 450 460
pF1KB7 DSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEK
160 170 180 190 200 210
470 480 490 500 510 520
pF1KB7 KMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSISM
220 230 240 250 260 270
530 540 550 560 570 580
pF1KB7 SVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGSSSSNAGGRGGNTGTSGGQAGPAGLS
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_016 SVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLS
280 290 300 310 320 330
590
pF1KB7 TPSTSTSNNSLP
::::::::::::
XP_016 TPSTSTSNNSLP
340
>>NP_001294868 (OMIM: 612457) AT-rich interactive domain (561 aa)
initn: 1157 init1: 778 opt: 1179 Z-score: 661.9 bits: 132.4 E(85289): 4e-30
Smith-Waterman score: 1231; 41.9% identity (63.2% similar) in 627 aa overlap (7-588:1-560)
10 20 30 40 50 60
pF1KB7 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
:: : :.::. .:: .: :: . :: .. .:..::.
NP_001 MEPLQQQQQQ-------QQQQQKQPHLAP------LQMDAREKQGQQMREAQF-
10 20 30 40
70 80 90 100 110
pF1KB7 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGE---EHFEDM
: :.. .. .:. ... : :: :: .: .: : . ::
NP_001 -LYAQKLVT----QPTLLSATAGRPSGS---------TPLGP-LARVPPTAAVAQVFER-
50 60 70 80
120 130 140 150 160 170
pF1KB7 ASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEE--DEEGLGPPGPASLGTTALFPR
.. . .:. :. .:.. :.:: : . : . . . .. : . :.:
NP_001 -GNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPA
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB7 KAQPPQAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQ----
. ::. : : . : :....:... . .:. .::.::
NP_001 PGLPPH-----------GQQAKED----HTKDASKASPSVSTAGQPNWNLDEQLKQNGGL
150 160 170 180
240 250 260 270
pF1KB7 --------------------LYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLD
::::::::.::::::::: ::::::::.:::::::::.::
NP_001 AWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILD
190 200 210 220 230 240
280 290 300 310 320 330
pF1KB7 LFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRG
:.::: ::::::::::.::::.:::::::::::::::::::::::::::::: :::::..
NP_001 LYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKA
250 260 270 280 290 300
340 350 360 370 380
pF1KB7 LSNPNELQAAIDSNRREGRRQSFGGSLFAYSPG--------GAHGMLSSPKL--PVSSLG
::.: :::::::.::::::: :...:::.:::. :: ..:: ::. :. .::
NP_001 LSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLG
310 320 330 340 350 360
390 400 410 420 430
pF1KB7 LAASTNGSS--ITPAPKIKKEEDSAIP-ITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAA
...:: :: :.:: ..: . . . . ::.:: : ::. :. :
NP_001 SSSGTNTSSPRISPATTLRKGDGAPVTTVPVPNRLAV-----PVTLASQQA---------
370 380 390 400 410
440 450 460 470 480 490
pF1KB7 VAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQ
....::::::::.:::.:: ::: . ...:.:::.:.:.:.::..:: ::::.::::..
NP_001 -GTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQQAFQRNFFSMARQLPMKIRINGR
420 430 440 450 460 470
500 510 520 530 540 550
pF1KB7 ASESRQDSAVNLTGTNGS-NSISMSVEINGIMYTGVLFAQPPAP--TPTSAPNKGGGGGG
: . . ::. :. :..: .::.:::.:.: :.:::::: :. ::: .. :...
NP_001 AEDRAEASAAALNLTTSSIGSINMSVDIDGTTYAGVLFAQKPVVHLITGSAP-QSLGSSA
480 490 500 510 520 530
560 570 580 590
pF1KB7 SSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
::::.. . :.. : :. . :::: :
NP_001 SSSSSSHCSPSPTSSRGT---PS--AEPSTSWSL
540 550 560
>>NP_006456 (OMIM: 612457) AT-rich interactive domain-co (560 aa)
initn: 1145 init1: 778 opt: 1170 Z-score: 657.0 bits: 131.5 E(85289): 7.4e-30
Smith-Waterman score: 1222; 41.8% identity (63.5% similar) in 627 aa overlap (7-588:1-559)
10 20 30 40 50 60
pF1KB7 MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMA
:: : :.::. .:: .: :: . :: .. .:..::.
NP_006 MEPLQQQQQQ-------QQQQQKQPHLAP------LQMDAREKQGQQMREAQF-
10 20 30 40
70 80 90 100 110
pF1KB7 ALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGE---EHFEDM
: :.. .. .:. ... : :: :: .: .: : . ::
NP_006 -LYAQKLVT----QPTLLSATAGRPSGS---------TPLGP-LARVPPTAAVAQVFER-
50 60 70 80
120 130 140 150 160 170
pF1KB7 ASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEE--DEEGLGPPGPASLGTTALFPR
.. . .:. :. .:.. :.:: : . : . . . .. : . :.:
NP_006 -GNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPA
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB7 KAQPPQAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFKQ----
. ::. : : . : :....:... . .:. .::.::
NP_006 PGLPPH-----------GQQAKED----HTKDASKASPSVSTAGQPNWNLDEQLKQNGGL
150 160 170 180
240 250 260 270
pF1KB7 --------------------LYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLD
::::::::.::::::::: ::::::::.:::::::::.::
NP_006 AWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILD
190 200 210 220 230 240
280 290 300 310 320 330
pF1KB7 LFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRG
:.::: ::::::::::.::::.:::::::::::::::::::::::::::::: :::::..
NP_006 LYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKA
250 260 270 280 290 300
340 350 360 370 380
pF1KB7 LSNPNELQAAIDSNRREGRRQSFGGSLFAYSPG--------GAHGMLSSPKL--PVSSLG
::.: :::::::.::::::: :...:::.:::. :: ..:: ::. :. .::
NP_006 LSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLG
310 320 330 340 350 360
390 400 410 420 430
pF1KB7 LAASTNGSS--ITPAPKIKKEEDSAIP-ITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAA
...:: :: :.:: ..: . . . . ::.:: : ::. :. :
NP_006 SSSGTNTSSPRISPATTLRKGDGAPVTTVPVPNRLAV-----PVTLASQQA---------
370 380 390 400 410
440 450 460 470 480 490
pF1KB7 VAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQ
....::::::::.:::.:: ::: . ...:.:::.:.:.:.::..:: ::::.::::..
NP_006 -GTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQQAFQRNFFSMARQLPMKIRINGR
420 430 440 450 460 470
500 510 520 530 540 550
pF1KB7 ASESRQDSA-VNLTGTNGSNSISMSVEINGIMYTGVLFAQPPAP--TPTSAPNKGGGGGG
.... ..: .::: :.. .::.:::.:.: :.:::::: :. ::: .. :...
NP_006 EDRAEASAAALNLT-TSSIGSINMSVDIDGTTYAGVLFAQKPVVHLITGSAP-QSLGSSA
480 490 500 510 520 530
560 570 580 590
pF1KB7 SSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTSNNSLP
::::.. . :.. : :. . :::: :
NP_006 SSSSSSHCSPSPTSSRGT---PS--AEPSTSWSL
540 550 560
>>XP_016866598 (OMIM: 135900,614556,614562) PREDICTED: A (1539 aa)
initn: 301 init1: 264 opt: 360 Z-score: 210.2 bits: 50.3 E(85289): 5.7e-05
Smith-Waterman score: 412; 28.0% identity (56.7% similar) in 379 aa overlap (32-395:155-505)
10 20 30 40 50 60
pF1KB7 KLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAA
:..: ...: : . ..:: ::
XP_016 SQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMG-PPMPTVNRKAQEAA
130 140 150 160 170 180
70 80 90 100 110
pF1KB7 LAAMRAAA--AGLGHPASPGGSEDG-----PPGSEEEDAARE--GTPGSPGRGREGPGEE
:.:.::: : . . :: ...: : :. . . .: . : . .
XP_016 AAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNS
190 200 210 220 230 240
120 130 140 150 160
pF1KB7 HFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLG---PPGPASLGT
... . :.: : .. : : .:: . . ... . : :: :..: .
XP_016 SAASVGLADMMSPG--ESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPV
250 260 270 280 290 300
170 180 190 200 210 220
pF1KB7 TALFPRKAQPPQAFRGDGVPRVLGGQERPGPG-PAHPGGAAHVAPQLQPPDHGDWTYEEQ
. . .. ..:.:: . .:: : :.. : . .. : :.
XP_016 PSPMSPSSASISSFHGDESDSI------SSPGWPKTPSS---------PKSSSSTTTGEK
310 320 330 340
230 240 250 260 270 280
pF1KB7 FKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEV
. ..::: ..:.:: ..: ..::..::.::. .: ..:. :::: ::: : : :::..:
XP_016 ITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQV
350 360 370 380 390 400
290 300 310 320 330 340
pF1KB7 INKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECE-KRGLSNPNELQAAIDSNRR
..: :::.. .::. :: .::: .:. ::..::. .::. .:: : :. .. :....
XP_016 NKNKKWRELATNLNVGTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQ
410 420 430 440 450 460
350 360 370 380 390 400
pF1KB7 EGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLA-ASTNGSSITPAPKIKKEEDSAIP
.: ::... : :..:. : :. . . : . :. :.:
XP_016 P--------KLQPPSPANS-GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPM
470 480 490 500 510
410 420 430 440 450 460
pF1KB7 ITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALV
XP_016 QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMR
520 530 540 550 560 570
>>XP_016866596 (OMIM: 135900,614556,614562) PREDICTED: A (2256 aa)
initn: 356 init1: 264 opt: 360 Z-score: 208.2 bits: 50.5 E(85289): 7.4e-05
Smith-Waterman score: 412; 28.0% identity (56.7% similar) in 379 aa overlap (32-395:872-1222)
10 20 30 40 50 60
pF1KB7 KLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAA
:..: ...: : . ..:: ::
XP_016 SQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMG-PPMPTVNRKAQEAA
850 860 870 880 890 900
70 80 90 100 110
pF1KB7 LAAMRAAA--AGLGHPASPGGSEDG-----PPGSEEEDAARE--GTPGSPGRGREGPGEE
:.:.::: : . . :: ...: : :. . . .: . : . .
XP_016 AAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNS
910 920 930 940 950 960
120 130 140 150 160
pF1KB7 HFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLG---PPGPASLGT
... . :.: : .. : : .:: . . ... . : :: :..: .
XP_016 SAASVGLADMMSPG--ESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPV
970 980 990 1000 1010
170 180 190 200 210 220
pF1KB7 TALFPRKAQPPQAFRGDGVPRVLGGQERPGPG-PAHPGGAAHVAPQLQPPDHGDWTYEEQ
. . .. ..:.:: . .:: : :.. : . .. : :.
XP_016 PSPMSPSSASISSFHGDESDSI------SSPGWPKTPSS---------PKSSSSTTTGEK
1020 1030 1040 1050 1060
230 240 250 260 270 280
pF1KB7 FKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEV
. ..::: ..:.:: ..: ..::..::.::. .: ..:. :::: ::: : : :::..:
XP_016 ITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQV
1070 1080 1090 1100 1110 1120
290 300 310 320 330 340
pF1KB7 INKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECE-KRGLSNPNELQAAIDSNRR
..: :::.. .::. :: .::: .:. ::..::. .::. .:: : :. .. :....
XP_016 NKNKKWRELATNLNVGTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQ
1130 1140 1150 1160 1170 1180
350 360 370 380 390 400
pF1KB7 EGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLA-ASTNGSSITPAPKIKKEEDSAIP
.: ::... : :..:. : :. . . : . :. :.:
XP_016 P--------KLQPPSPANS-GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPM
1190 1200 1210 1220 1230
410 420 430 440 450 460
pF1KB7 ITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALV
XP_016 QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMR
1240 1250 1260 1270 1280 1290
593 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:13:54 2016 done: Sun Nov 6 06:13:56 2016
Total Scan time: 14.510 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]