Result of FASTA (omim) for
pFN21AB7765
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7765, 450 aa
1>>>pF1KB7765 450 - 450 aa - 450 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0974+/-0.00037; mu= 0.3889+/- 0.023
mean_var=194.4794+/-40.146, 0's: 0 Z-trim(119.8): 15 B-trim: 0 in 0/56
Lambda= 0.091968
statistics sampled from 34218 (34233) to 34218 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.401), width: 16
Scan time: 10.380
The best scores are: opt bits E(85289)
NP_003213 (OMIM: 601602) transcription factor AP-2 ( 450) 3038 415.4 1.5e-115
NP_003212 (OMIM: 169100,601601,617035) transcripti ( 460) 1653 231.7 3.2e-60
XP_011513139 (OMIM: 169100,601601,617035) PREDICTE ( 469) 1625 228.0 4.3e-59
XP_016866723 (OMIM: 169100,601601,617035) PREDICTE ( 503) 1583 222.4 2.2e-57
XP_016866722 (OMIM: 169100,601601,617035) PREDICTE ( 515) 1583 222.4 2.2e-57
NP_001027451 (OMIM: 107580,113620) transcription f ( 431) 1468 207.1 7.4e-53
NP_001035890 (OMIM: 107580,113620) transcription f ( 433) 1468 207.1 7.4e-53
NP_003211 (OMIM: 107580,113620) transcription fact ( 437) 1468 207.1 7.5e-53
XP_006715238 (OMIM: 107580,113620) PREDICTED: tran ( 482) 1468 207.1 8.1e-53
XP_016866721 (OMIM: 107580,113620) PREDICTED: tran ( 519) 1468 207.2 8.7e-53
XP_011513135 (OMIM: 107580,113620) PREDICTED: tran ( 387) 1447 204.3 4.7e-52
NP_848643 (OMIM: 614428) transcription factor AP-2 ( 442) 1367 193.7 8.2e-49
XP_016866724 (OMIM: 169100,601601,617035) PREDICTE ( 307) 1153 165.2 2.1e-40
XP_016856628 (OMIM: 614428) PREDICTED: transcripti ( 356) 1036 149.8 1.1e-35
NP_758438 (OMIM: 610161) transcription factor AP-2 ( 452) 1008 146.1 1.8e-34
>>NP_003213 (OMIM: 601602) transcription factor AP-2 gam (450 aa)
initn: 3038 init1: 3038 opt: 3038 Z-score: 2195.5 bits: 415.4 E(85289): 1.5e-115
Smith-Waterman score: 3038; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450)
10 20 30 40 50 60
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PAGLLPHLSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PAGLLPHLSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVGAVMNPTEVFCSVPGRLSLLSSTSKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVGAVMNPTEVFCSVPGRLSLLSSTSKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 LLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 EFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEAL
370 380 390 400 410 420
430 440 450
pF1KB7 IVIDKSYMNPGDQSPADSNKTLEKMEKHRK
::::::::::::::::::::::::::::::
NP_003 IVIDKSYMNPGDQSPADSNKTLEKMEKHRK
430 440 450
>>NP_003212 (OMIM: 169100,601601,617035) transcription f (460 aa)
initn: 1468 init1: 685 opt: 1653 Z-score: 1202.2 bits: 231.7 E(85289): 3.2e-60
Smith-Waterman score: 1653; 59.6% identity (77.2% similar) in 465 aa overlap (1-450:12-460)
10 20 30 40
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHT
::::...:::::. :::::: . . :. .:.:..: :: :::::::
NP_003 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 GVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQ
...::: ::::::: : : :: :::::... :. .:::::: ::. : :: :
NP_003 PSSDFQPP-YFPPPYQPLPYHQSQDPYSHVNDPYS--LNPLHQP-----QQHPWGQRQRQ
70 80 90 100 110
110 120 130 140 150 160
pF1KB7 E-GAGLPSHHGRPAGLLPHLSGLEAGAVSARRDAY--RRSDLLLPHAH-ALDAAGLAENL
: :. : .: . ::.::::. ::: . :: :.:: :: .::: :....:
NP_003 EVGSEAGSLLPQPRAALPQLSGLDP-----RRDYHSVRRPDVLLHSAHHGLDA-GMGDSL
120 130 140 150 160
170 180 190 200 210
pF1KB7 GLHDMPHQ-MDEVQNVDDQH---LLLHDQTVIRKGPISMTKNPLNLPCQKE--LVGAVMN
.:: . : :..::.:.: . . : ::.::.: :. :. .: .:. : : .:
NP_003 SLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVP-PKSVTSLMMNKDGFLGGMSVN
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB7 PTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLR
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
NP_003 TGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLR
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 EKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHL
:.:.::::::::::::::.:::::::::::::::::::.:.::.:::.: :.:::.: :
NP_003 ERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHT
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB7 GGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHG
... .:::::::..:::::::.::.::::: :.:: .:.:: .::.::.::::::::
NP_003 DP-SDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHG
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB7 FGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADS-----NKTLEKMEKHRK
::. :::::..:::::. ::: .:: ..: . : .:: .: :::::
NP_003 FGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
410 420 430 440 450 460
>>XP_011513139 (OMIM: 169100,601601,617035) PREDICTED: t (469 aa)
initn: 1420 init1: 685 opt: 1625 Z-score: 1182.0 bits: 228.0 E(85289): 4.3e-59
Smith-Waterman score: 1625; 58.4% identity (75.7% similar) in 474 aa overlap (1-450:12-469)
10 20 30 40
pF1KB7 MLWKITDNVKYEEDCE---------DRHDGSSNGNPRVPHLSSAGQHLY
::::...:::::. : ::::: . . :. .:.:..: :
XP_011 MHSPPRDQAAIMLWKLVENVKYEDIYEMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPY
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 SPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQ
: ::::::: ...::: ::::::: : : :: :::::... :. .:::::: ::
XP_011 SSAPPLSHTPSSDFQPP-YFPPPYQPLPYHQSQDPYSHVNDPYS--LNPLHQP-----QQ
70 80 90 100 110
110 120 130 140 150
pF1KB7 QAWPGRQSQE-GAGLPSHHGRPAGLLPHLSGLEAGAVSARRDAY--RRSDLLLPHAH-AL
. : :: :: :. : .: . ::.::::. ::: . :: :.:: :: .:
XP_011 HPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDP-----RRDYHSVRRPDVLLHSAHHGL
120 130 140 150 160
160 170 180 190 200 210
pF1KB7 DAAGLAENLGLHDMPHQ-MDEVQNVDDQH---LLLHDQTVIRKGPISMTKNPLNLPCQKE
:: :....:.:: . : :..::.:.: . . : ::.::.: :. :. .: .:.
XP_011 DA-GMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVP-PKSVTSLMMNKD
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB7 --LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAK
: : .: :::::::::::::::::::::::.:::::::::::::::::::::::::
XP_011 GFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAK
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 SKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPV
::::::::::.:.::::::::::::::.:::::::::::::::::::.:.::.:::.: :
XP_011 SKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAV
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB7 AEYLTRPHLGGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCL
.:::.: : ... .:::::::..:::::::.::.::::: :.:: .:.:: .::.::
XP_011 SEYLNRQHTDP-SDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCL
350 360 370 380 390 400
400 410 420 430 440
pF1KB7 SHFSLITHGFGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADS-----NKTLEKM
.::::::::::. :::::..:::::. ::: .:: ..: . : .:: .:
XP_011 THFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKE
410 420 430 440 450 460
450
pF1KB7 EKHRK
:::::
XP_011 EKHRK
>>XP_016866723 (OMIM: 169100,601601,617035) PREDICTED: t (503 aa)
initn: 1398 init1: 685 opt: 1583 Z-score: 1151.4 bits: 222.4 E(85289): 2.2e-57
Smith-Waterman score: 1583; 59.5% identity (76.8% similar) in 449 aa overlap (17-450:71-503)
10 20 30 40
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPL
::::: . . :. .:.:..: :: ::::
XP_016 TKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPL
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB7 SHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGR
::: ...::: ::::::: : : :: :::::... :. .:::::: ::. : :
XP_016 SHTPSSDFQPP-YFPPPYQPLPYHQSQDPYSHVNDPYS--LNPLHQP-----QQHPWGQR
110 120 130 140 150
110 120 130 140 150 160
pF1KB7 QSQE-GAGLPSHHGRPAGLLPHLSGLEAGAVSARRDAY--RRSDLLLPHAH-ALDAAGLA
: :: :. : .: . ::.::::. ::: . :: :.:: :: .::: :..
XP_016 QRQEVGSEAGSLLPQPRAALPQLSGLD-----PRRDYHSVRRPDVLLHSAHHGLDA-GMG
160 170 180 190 200
170 180 190 200 210
pF1KB7 ENLGLHDMPHQ-MDEVQNVDDQH---LLLHDQTVIRKGPISMTKNPLNLPCQKE--LVGA
..:.:: . : :..::.:.: . . : ::.::.: :. :. .: .:. : :
XP_016 DSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVP-PKSVTSLMMNKDGFLGGM
210 220 230 240 250 260
220 230 240 250 260 270
pF1KB7 VMNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGR
.: :::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 SVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGR
270 280 290 300 310 320
280 290 300 310 320 330
pF1KB7 SLREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTR
::::.:.::::::::::::::.:::::::::::::::::::.:.::.:::.: :.:::.:
XP_016 SLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNR
330 340 350 360 370 380
340 350 360 370 380 390
pF1KB7 PHLGGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLI
: ... .:::::::..:::::::.::.::::: :.:: .:.:: .::.::.:::::
XP_016 QHTDP-SDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLI
390 400 410 420 430 440
400 410 420 430 440 450
pF1KB7 THGFGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADS-----NKTLEKMEKHRK
:::::. :::::..:::::. ::: .:: ..: . : .:: .: :::::
XP_016 THGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
450 460 470 480 490 500
>>XP_016866722 (OMIM: 169100,601601,617035) PREDICTED: t (515 aa)
initn: 1398 init1: 685 opt: 1583 Z-score: 1151.2 bits: 222.4 E(85289): 2.2e-57
Smith-Waterman score: 1583; 59.5% identity (76.8% similar) in 449 aa overlap (17-450:83-515)
10 20 30 40
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPL
::::: . . :. .:.:..: :: ::::
XP_016 TKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPL
60 70 80 90 100 110
50 60 70 80 90 100
pF1KB7 SHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGR
::: ...::: ::::::: : : :: :::::... :. .:::::: ::. : :
XP_016 SHTPSSDFQPP-YFPPPYQPLPYHQSQDPYSHVNDPYS--LNPLHQP-----QQHPWGQR
120 130 140 150 160
110 120 130 140 150 160
pF1KB7 QSQE-GAGLPSHHGRPAGLLPHLSGLEAGAVSARRDAY--RRSDLLLPHAH-ALDAAGLA
: :: :. : .: . ::.::::. ::: . :: :.:: :: .::: :..
XP_016 QRQEVGSEAGSLLPQPRAALPQLSGLD-----PRRDYHSVRRPDVLLHSAHHGLDA-GMG
170 180 190 200 210
170 180 190 200 210
pF1KB7 ENLGLHDMPHQ-MDEVQNVDDQH---LLLHDQTVIRKGPISMTKNPLNLPCQKE--LVGA
..:.:: . : :..::.:.: . . : ::.::.: :. :. .: .:. : :
XP_016 DSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVP-PKSVTSLMMNKDGFLGGM
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB7 VMNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGR
.: :::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 SVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGR
280 290 300 310 320 330
280 290 300 310 320 330
pF1KB7 SLREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTR
::::.:.::::::::::::::.:::::::::::::::::::.:.::.:::.: :.:::.:
XP_016 SLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNR
340 350 360 370 380 390
340 350 360 370 380 390
pF1KB7 PHLGGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLI
: ... .:::::::..:::::::.::.::::: :.:: .:.:: .::.::.:::::
XP_016 QHTDP-SDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLI
400 410 420 430 440 450
400 410 420 430 440 450
pF1KB7 THGFGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADS-----NKTLEKMEKHRK
:::::. :::::..:::::. ::: .:: ..: . : .:: .: :::::
XP_016 THGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
460 470 480 490 500 510
>>NP_001027451 (OMIM: 107580,113620) transcription facto (431 aa)
initn: 1551 init1: 743 opt: 1468 Z-score: 1069.9 bits: 207.1 E(85289): 7.4e-53
Smith-Waterman score: 1740; 63.4% identity (82.6% similar) in 443 aa overlap (17-450:10-431)
10 20 30 40 50 60
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF
:::::.:::. :.:.:...:: :. ::::::: :..::: ::
NP_001 MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YF
10 20 30 40 50
70 80 90 100 110
pF1KB7 PPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHH
::::: . : :: :::::... :. .:::: :: : :. .::: :::::.. : .:.
NP_001 PPPYQPI-YPQSQDPYSHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 GRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEV
: ::: ::::. ::: ::: . :: ::: ..::.. :..:..:: ..::
NP_001 G-----LPHQLSGLD-----PRRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEV
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 QNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLS
.:.: . . :::::.:::.:..:. : .: .:. : :.:.::.:::::::::::
NP_001 PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB7 RRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNML
:::::.:::::::::::::::::::.::::.:::.: :::.:.: : . ::...:::::
NP_001 RRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNML
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB7 LAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSAL
::..:.:::::.::.:::.: :.:: :.:: .::.::.::.::.::::: :.::::.::
NP_001 LATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTAL
340 350 360 370 380 390
420 430 440 450
pF1KB7 QNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK
:::. ::: ..:: :.. . .: .:.: :. .: :::::
NP_001 QNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>NP_001035890 (OMIM: 107580,113620) transcription facto (433 aa)
initn: 1553 init1: 743 opt: 1468 Z-score: 1069.9 bits: 207.1 E(85289): 7.4e-53
Smith-Waterman score: 1745; 63.2% identity (82.5% similar) in 446 aa overlap (14-450:9-433)
10 20 30 40 50 60
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF
: .:::::.:::. :.:.:...:: :. ::::::: :..::: ::
NP_001 MSILAKMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YF
10 20 30 40 50
70 80 90 100 110
pF1KB7 PPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHH
::::: . : :: :::::... : ..:::: :: : :. .::: :::::.. : .:.
NP_001 PPPYQPI-YPQSQDPYSHVNDPY--SLNPLHAQPQP---QHPGWPGQRQSQESGLLHTHR
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 GRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEV
: ::: ::::. ::: ::: . :: ::: ..::.. :..:..:: ..::
NP_001 G-----LPHQLSGLDP-----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEV
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 QNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLS
.:.: . . :::::.:::.:..:. : .: .:. : :.:.::.:::::::::::
NP_001 PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB7 RRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNML
:::::.:::::::::::::::::::.::::.:::.: :::.:.: : . ::...:::::
NP_001 RRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNML
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB7 LAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSAL
::..:.:::::.::.:::.: :.:: :.:: .::.::.::.::.::::: :.::::.::
NP_001 LATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTAL
340 350 360 370 380 390
420 430 440 450
pF1KB7 QNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK
:::. ::: ..:: :.. . .: .:.: :. .: :::::
NP_001 QNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>NP_003211 (OMIM: 107580,113620) transcription factor A (437 aa)
initn: 1552 init1: 743 opt: 1468 Z-score: 1069.8 bits: 207.1 E(85289): 7.5e-53
Smith-Waterman score: 1834; 64.1% identity (83.0% similar) in 459 aa overlap (1-450:1-437)
10 20 30 40 50 60
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF
::::.:::.::: ::::::::.:::. :.:.:...:: :. ::::::: :..::: ::
NP_003 MLWKLTDNIKYE-DCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YF
10 20 30 40 50
70 80 90 100 110
pF1KB7 PPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHH
::::: . : :: :::::... :. .:::: :: : :. .::: :::::.. : .:.
NP_003 PPPYQPI-YPQSQDPYSHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 GRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEV
: ::: ::::. ::: ::: . :: ::: ..::.. :..:..:: ..::
NP_003 G-----LPHQLSGLDP-----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEV
120 130 140 150
180 190 200 210 220 230
pF1KB7 QNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLS
.:.: . . :::::.:::.:..:. : .: .:. : :.:.::.:::::::::::
NP_003 PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB7 RRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNML
:::::.:::::::::::::::::::.::::.:::.: :::.:.: : . ::...:::::
NP_003 RRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNML
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB7 LAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSAL
::..:.:::::.::.:::.: :.:: :.:: .::.::.::.::.::::: :.::::.::
NP_003 LATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTAL
340 350 360 370 380 390
420 430 440 450
pF1KB7 QNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK
:::. ::: ..:: :.. . .: .:.: :. .: :::::
NP_003 QNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>XP_006715238 (OMIM: 107580,113620) PREDICTED: transcri (482 aa)
initn: 1557 init1: 743 opt: 1468 Z-score: 1069.2 bits: 207.1 E(85289): 8.1e-53
Smith-Waterman score: 1746; 63.5% identity (82.7% similar) in 444 aa overlap (16-450:60-482)
10 20 30 40
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPP
::::::.:::. :.:.:...:: :. :::
XP_006 GSACRAESPTSARTRSQAAPTRYARPPLHPEDRHDGTSNGTARLPQLGTVGQSPYTSAPP
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 LSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWP
:::: :..::: ::::::: . : :: :::::... :. .:::: :: : :. .::
XP_006 LSHTPNADFQPP-YFPPPYQPI-YPQSQDPYSHVNDPYS--LNPLHAQPQP---QHPGWP
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB7 G-RQSQEGAGLPSHHGRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLA
: :::::.. : .:.: ::: ::::. ::: ::: . :: ::: ..::.
XP_006 GQRQSQESGLLHTHRG-----LPHQLSGLD-----PRRD-YRRHEDLLHGPHAL-SSGLG
150 160 170 180 190
170 180 190 200 210
pF1KB7 ENLGLHDMPHQMDEVQNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAV
. :..:..:: ..:: .:.: . . :::::.:::.:..:. : .: .:. : :.:
XP_006 D-LSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV
200 210 220 230 240
220 230 240 250 260 270
pF1KB7 MNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRS
.::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRS
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB7 LREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRP
::::::::::::::::::::.:::::::::::::::::::.::::.:::.: :::.:.:
XP_006 LREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQ
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB7 HLGGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLIT
: . ::...:::::::..:.:::::.::.:::.: :.:: :.:: .::.::.::.::.
XP_006 H-SDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLIS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB7 HGFGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK
::::: :.::::.:::::. ::: ..:: :.. . .: .:.: :. .: :::::
XP_006 HGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
430 440 450 460 470 480
>>XP_016866721 (OMIM: 107580,113620) PREDICTED: transcri (519 aa)
initn: 1553 init1: 743 opt: 1468 Z-score: 1068.7 bits: 207.2 E(85289): 8.7e-53
Smith-Waterman score: 1742; 63.3% identity (82.7% similar) in 444 aa overlap (16-450:97-519)
10 20 30 40
pF1KB7 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPP
.:::::.:::. :.:.:...:: :. :::
XP_016 ALCGAGTAAGGVNSWASAHASAGSNPALYDQDRHDGTSNGTARLPQLGTVGQSPYTSAPP
70 80 90 100 110 120
50 60 70 80 90 100
pF1KB7 LSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWP
:::: :..::: ::::::: . : :: :::::... :. .:::: :: : :. .::
XP_016 LSHTPNADFQPP-YFPPPYQPI-YPQSQDPYSHVNDPYS--LNPLHAQPQP---QHPGWP
130 140 150 160 170
110 120 130 140 150 160
pF1KB7 G-RQSQEGAGLPSHHGRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLA
: :::::.. : .:.: ::: ::::. ::: ::: . :: ::: ..::.
XP_016 GQRQSQESGLLHTHRG-----LPHQLSGLD-----PRRD-YRRHEDLLHGPHAL-SSGLG
180 190 200 210 220
170 180 190 200 210
pF1KB7 ENLGLHDMPHQMDEVQNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAV
. :..:..:: ..:: .:.: . . :::::.:::.:..:. : .: .:. : :.:
XP_016 D-LSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB7 MNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRS
.::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRS
290 300 310 320 330 340
280 290 300 310 320 330
pF1KB7 LREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRP
::::::::::::::::::::.:::::::::::::::::::.::::.:::.: :::.:.:
XP_016 LREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQ
350 360 370 380 390 400
340 350 360 370 380 390
pF1KB7 HLGGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLIT
: . ::...:::::::..:.:::::.::.:::.: :.:: :.:: .::.::.::.::.
XP_016 H-SDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLIS
410 420 430 440 450 460
400 410 420 430 440 450
pF1KB7 HGFGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK
::::: :.::::.:::::. ::: ..:: :.. . .: .:.: :. .: :::::
XP_016 HGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
470 480 490 500 510
450 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:15:16 2016 done: Thu Nov 3 15:15:17 2016
Total Scan time: 10.380 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]