Result of FASTA (omim) for
pFN21AB7693
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7693, 350 aa
1>>>pF1KB7693 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6250+/-0.000334; mu= 5.0806+/- 0.021
mean_var=393.9862+/-87.856, 0's: 0 Z-trim(125.3): 1209 B-trim: 0 in 0/59
Lambda= 0.064615
statistics sampled from 47117 (48773) to 47117 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.844), E-opt: 0.2 (0.572), width: 16
Scan time: 10.020
The best scores are: opt bits E(85289)
NP_710162 (OMIM: 610160) zinc finger protein 367 [ ( 350) 2448 241.6 2e-63
XP_011516647 (OMIM: 610160) PREDICTED: zinc finger ( 202) 1342 138.1 1.6e-32
NP_057079 (OMIM: 605328,612001) Krueppel-like fact ( 288) 346 45.5 0.00017
NP_001287766 (OMIM: 606633,613849) transcription f ( 413) 309 42.3 0.0023
XP_011536202 (OMIM: 606633,613849) PREDICTED: tran ( 413) 309 42.3 0.0023
NP_001166938 (OMIM: 606633,613849) transcription f ( 431) 309 42.3 0.0024
NP_690599 (OMIM: 606633,613849) transcription fact ( 431) 309 42.3 0.0024
NP_001310577 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310589 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310581 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310590 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310583 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310580 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310570 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310573 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310582 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
XP_016872092 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
NP_001310600 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
XP_016872090 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
XP_016872089 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
XP_016872088 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
XP_016872087 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
NP_001310594 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310592 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310584 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310578 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310585 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310571 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
XP_016872086 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
NP_001310576 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310591 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310572 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310587 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310567 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310588 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310579 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310601 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310602 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
XP_016872091 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
NP_001310593 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
XP_011517945 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
XP_006717561 (OMIM: 189909,609141,613270) PREDICTE ( 906) 301 42.0 0.006
NP_001310575 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310574 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310586 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310595 (OMIM: 189909,609141,613270) zinc fin ( 906) 301 42.0 0.006
NP_001310607 (OMIM: 189909,609141,613270) zinc fin (1033) 301 42.1 0.0065
NP_001310604 (OMIM: 189909,609141,613270) zinc fin (1036) 301 42.1 0.0065
NP_001310603 (OMIM: 189909,609141,613270) zinc fin (1050) 301 42.1 0.0066
NP_001167566 (OMIM: 189909,609141,613270) zinc fin (1057) 301 42.1 0.0066
>>NP_710162 (OMIM: 610160) zinc finger protein 367 [Homo (350 aa)
initn: 2448 init1: 2448 opt: 2448 Z-score: 1259.6 bits: 241.6 E(85289): 2e-63
Smith-Waterman score: 2448; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 AASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 AASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 SLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHAN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RHCPKHPYARLKREEPTDTLSKHQAADNKAAAEWLARYWEMREQRTPTLKGKLVQKADQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 RHCPKHPYARLKREEPTDTLSKHQAADNKAAAEWLARYWEMREQRTPTLKGKLVQKADQE
250 260 270 280 290 300
310 320 330 340 350
pF1KB7 QQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELANLTGAPLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 QQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELANLTGAPLRQ
310 320 330 340 350
>>XP_011516647 (OMIM: 610160) PREDICTED: zinc finger pro (202 aa)
initn: 1539 init1: 1342 opt: 1342 Z-score: 704.8 bits: 138.1 E(85289): 1.6e-32
Smith-Waterman score: 1342; 98.5% identity (99.5% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 AASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHAN
::::::::::. .:
XP_011 SLQAHKRTHTALEPGTVLSIGI
190 200
>>NP_057079 (OMIM: 605328,612001) Krueppel-like factor 1 (288 aa)
initn: 449 init1: 198 opt: 346 Z-score: 201.5 bits: 45.5 E(85289): 0.00017
Smith-Waterman score: 346; 38.1% identity (55.0% similar) in 202 aa overlap (88-267:86-276)
60 70 80 90 100 110
pF1KB7 PTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAA-----LPAAAAAEHS-GLRGRGA
:::: : :: : : : .: .:
NP_057 KDSASLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAA
60 70 80 90 100 110
120 130 140 150 160
pF1KB7 -PP-PAASASAAASGGEDEEEASSPDSGH--LKDGIRRGRPRADTVRDLINEGEHSSSRI
:: :: : .: : :.: . ::. :.. .:::: ::: : . .
NP_057 APPSPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADL--------ESPQRKH
120 130 140 150 160
170 180 190 200 210 220
pF1KB7 RCNI--CNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPF
.:. :..:. . . :.:: ::::::::. :.. ::.: :..: .: : : ::::: :
NP_057 KCHYAGCEKVYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKF
170 180 190 200 210 220
230 240 250 260 270
pF1KB7 VCSENGCLSRFT-------HANRHCPKHPYARLKRE---EPTDTLSKHQAADNKAAAEWL
: : .:: :: :: :: . :.:. : .:: .. .:
NP_057 SCP--ICEKRFMRSDHLTKHARRHANFHP-GMLQRRGGGSRTGSLSDYSRSDASSPTISP
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB7 ARYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGAL
NP_057 ASSP
>>NP_001287766 (OMIM: 606633,613849) transcription facto (413 aa)
initn: 233 init1: 177 opt: 309 Z-score: 181.3 bits: 42.3 E(85289): 0.0023
Smith-Waterman score: 313; 31.3% identity (52.2% similar) in 249 aa overlap (4-246:124-354)
10 20 30
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVS
:..: .. .: : : : . . . .
NP_001 VPKGHSSSDCLPSVYTSLDMTHPYGSWYKAGIHAGISPGPGNTPTPWWDMHPGGNWLGGG
100 110 120 130 140 150
40 50 60 70 80 90
pF1KB7 VIRTTPIKPTCGGGGEPEPPP--PLIPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAA
. .. : : : :: : .:: : ::: : . :.:: .
NP_001 QGQGDGLQGTLPTG--PAQPPLNPQLPTYP--SDFA--PLNPAPYPAPHLLQPGPQHVLP
160 170 180 190 200
100 110 120 130 140
pF1KB7 SAALPAAAAAEHSGLRGRGAPPPAASASAAASGGEDEEEA--SSPDSGHLKDGIRRGRPR
. . :... . :.: :. : .::...::: : :: : . .. : :
NP_001 QDVYKPKAVGNSGQLEGSGGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAA
210 220 230 240 250 260
150 160 170 180 190 200
pF1KB7 ADTVRDLINEGEHSSSRIRCNI--CNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFV
: . : :: :.: :..:. . . :.:: : ::::::..:.. ::: :.
NP_001 AGLRKKPI----HS-----CHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFT
270 280 290 300 310
210 220 230 240 250 260
pF1KB7 QSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDTLSKHQAAD
.: .:. : : :: :: :.: : .:::... : ::
NP_001 RSDELERHVRTHTREKKFTCLL--CSKRFTRSD-HLSKHQRTHGEPGPGPPPSGPKELGE
320 330 340 350 360 370
270 280 290 300 310 320
pF1KB7 NKAAAEWLARYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQ
NP_001 GRSTGEEEASQTPRPSASPATPEKAPGGSPEQSNLLEI
380 390 400 410
>>XP_011536202 (OMIM: 606633,613849) PREDICTED: transcri (413 aa)
initn: 233 init1: 177 opt: 309 Z-score: 181.3 bits: 42.3 E(85289): 0.0023
Smith-Waterman score: 313; 31.3% identity (52.2% similar) in 249 aa overlap (4-246:124-354)
10 20 30
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVS
:..: .. .: : : : . . . .
XP_011 VPKGHSSSDCLPSVYTSLDMTHPYGSWYKAGIHAGISPGPGNTPTPWWDMHPGGNWLGGG
100 110 120 130 140 150
40 50 60 70 80 90
pF1KB7 VIRTTPIKPTCGGGGEPEPPP--PLIPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAA
. .. : : : :: : .:: : ::: : . :.:: .
XP_011 QGQGDGLQGTLPTG--PAQPPLNPQLPTYP--SDFA--PLNPAPYPAPHLLQPGPQHVLP
160 170 180 190 200
100 110 120 130 140
pF1KB7 SAALPAAAAAEHSGLRGRGAPPPAASASAAASGGEDEEEA--SSPDSGHLKDGIRRGRPR
. . :... . :.: :. : .::...::: : :: : . .. : :
XP_011 QDVYKPKAVGNSGQLEGSGGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAA
210 220 230 240 250 260
150 160 170 180 190 200
pF1KB7 ADTVRDLINEGEHSSSRIRCNI--CNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFV
: . : :: :.: :..:. . . :.:: : ::::::..:.. ::: :.
XP_011 AGLRKKPI----HS-----CHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFT
270 280 290 300 310
210 220 230 240 250 260
pF1KB7 QSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDTLSKHQAAD
.: .:. : : :: :: :.: : .:::... : ::
XP_011 RSDELERHVRTHTREKKFTCLL--CSKRFTRSD-HLSKHQRTHGEPGPGPPPSGPKELGE
320 330 340 350 360 370
270 280 290 300 310 320
pF1KB7 NKAAAEWLARYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQ
XP_011 GRSTGEEEASQTPRPSASPATPEKAPGGSPEQSNLLEI
380 390 400 410
>>NP_001166938 (OMIM: 606633,613849) transcription facto (431 aa)
initn: 233 init1: 177 opt: 309 Z-score: 181.1 bits: 42.3 E(85289): 0.0024
Smith-Waterman score: 313; 31.3% identity (52.2% similar) in 249 aa overlap (4-246:142-372)
10 20 30
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVS
:..: .. .: : : : . . . .
NP_001 VPKGHSSSDCLPSVYTSLDMTHPYGSWYKAGIHAGISPGPGNTPTPWWDMHPGGNWLGGG
120 130 140 150 160 170
40 50 60 70 80 90
pF1KB7 VIRTTPIKPTCGGGGEPEPPP--PLIPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAA
. .. : : : :: : .:: : ::: : . :.:: .
NP_001 QGQGDGLQGTLPTG--PAQPPLNPQLPTYP--SDFA--PLNPAPYPAPHLLQPGPQHVLP
180 190 200 210 220
100 110 120 130 140
pF1KB7 SAALPAAAAAEHSGLRGRGAPPPAASASAAASGGEDEEEA--SSPDSGHLKDGIRRGRPR
. . :... . :.: :. : .::...::: : :: : . .. : :
NP_001 QDVYKPKAVGNSGQLEGSGGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAA
230 240 250 260 270 280
150 160 170 180 190 200
pF1KB7 ADTVRDLINEGEHSSSRIRCNI--CNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFV
: . : :: :.: :..:. . . :.:: : ::::::..:.. ::: :.
NP_001 AGLRKKPI----HS-----CHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFT
290 300 310 320 330
210 220 230 240 250 260
pF1KB7 QSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDTLSKHQAAD
.: .:. : : :: :: :.: : .:::... : ::
NP_001 RSDELERHVRTHTREKKFTCLL--CSKRFTRSD-HLSKHQRTHGEPGPGPPPSGPKELGE
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB7 NKAAAEWLARYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQ
NP_001 GRSTGEEEASQTPRPSASPATPEKAPGGSPEQSNLLEI
400 410 420 430
>>NP_690599 (OMIM: 606633,613849) transcription factor S (431 aa)
initn: 233 init1: 177 opt: 309 Z-score: 181.1 bits: 42.3 E(85289): 0.0024
Smith-Waterman score: 313; 31.3% identity (52.2% similar) in 249 aa overlap (4-246:142-372)
10 20 30
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVS
:..: .. .: : : : . . . .
NP_690 VPKGHSSSDCLPSVYTSLDMTHPYGSWYKAGIHAGISPGPGNTPTPWWDMHPGGNWLGGG
120 130 140 150 160 170
40 50 60 70 80 90
pF1KB7 VIRTTPIKPTCGGGGEPEPPP--PLIPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAA
. .. : : : :: : .:: : ::: : . :.:: .
NP_690 QGQGDGLQGTLPTG--PAQPPLNPQLPTYP--SDFA--PLNPAPYPAPHLLQPGPQHVLP
180 190 200 210 220
100 110 120 130 140
pF1KB7 SAALPAAAAAEHSGLRGRGAPPPAASASAAASGGEDEEEA--SSPDSGHLKDGIRRGRPR
. . :... . :.: :. : .::...::: : :: : . .. : :
NP_690 QDVYKPKAVGNSGQLEGSGGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAA
230 240 250 260 270 280
150 160 170 180 190 200
pF1KB7 ADTVRDLINEGEHSSSRIRCNI--CNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFV
: . : :: :.: :..:. . . :.:: : ::::::..:.. ::: :.
NP_690 AGLRKKPI----HS-----CHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFT
290 300 310 320 330
210 220 230 240 250 260
pF1KB7 QSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDTLSKHQAAD
.: .:. : : :: :: :.: : .:::... : ::
NP_690 RSDELERHVRTHTREKKFTCLL--CSKRFTRSD-HLSKHQRTHGEPGPGPPPSGPKELGE
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB7 NKAAAEWLARYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQ
NP_690 GRSTGEEEASQTPRPSASPATPEKAPGGSPEQSNLLEI
400 410 420 430
>>NP_001310577 (OMIM: 189909,609141,613270) zinc finger (906 aa)
initn: 234 init1: 127 opt: 301 Z-score: 173.9 bits: 42.0 E(85289): 0.006
Smith-Waterman score: 302; 25.5% identity (53.1% similar) in 318 aa overlap (32-329:552-853)
10 20 30 40 50
pF1KB7 IRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPE----PPP--P
.: . : : .: .:: :: :
NP_001 PKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVIPPSANP
530 540 550 560 570 580
60 70 80 90 100 110
pF1KB7 L---IPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAP
. ::: . .: . ..: . :. . .: .: . . .
NP_001 INIAIPTVTAQLPTIVAI----ADQNSVPCLRALAANKQTILIPQVAYTYSTTVSPAVQE
590 600 610 620 630
120 130 140 150 160 170
pF1KB7 PPAASASAAASGGEDE-EEASSPDSGHLKD-GIRRGRPRADTVRDLINEGEHSSSRIRCN
:: . .:..:: ...:: ....: . . : .: : : .. :.
NP_001 PPLKVIQP--NGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTEN-GMYA-----CD
640 650 660 670 680
180 190 200 210 220 230
pF1KB7 ICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSEN
.:...: . .:: :: :::.::. : : ::: .. .: :.:::.::::. :..
NP_001 LCDKIFQKSSSLLRHKYEHTGKRPHECGI--CKKAFKHKHHLIEHMRLHSGEKPYQCDK-
690 700 710 720 730 740
240 250 260 270 280
pF1KB7 GCLSRFTHANRHCPK--HPYARLKRE-EPTDTLSKHQAADNKAAAEWL-ARYWEMR---E
: .::.:.. . . : :. ::: : :. ...:. . . : . :: . .
NP_001 -CGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEILSNEHVGARASPSQGDSD
750 760 770 780 790 800
290 300 310 320 330 340
pF1KB7 QRTPTLK--GKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELA
.: . . .: ..:.. .: :: ..: .. .: ... .:..:
NP_001 ERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENE
810 820 830 840 850 860
350
pF1KB7 NLTGAPLRQ
NP_001 GEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEKTNEA
870 880 890 900
>>NP_001310589 (OMIM: 189909,609141,613270) zinc finger (906 aa)
initn: 234 init1: 127 opt: 301 Z-score: 173.9 bits: 42.0 E(85289): 0.006
Smith-Waterman score: 302; 25.5% identity (53.1% similar) in 318 aa overlap (32-329:552-853)
10 20 30 40 50
pF1KB7 IRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPE----PPP--P
.: . : : .: .:: :: :
NP_001 PKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVIPPSANP
530 540 550 560 570 580
60 70 80 90 100 110
pF1KB7 L---IPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAP
. ::: . .: . ..: . :. . .: .: . . .
NP_001 INIAIPTVTAQLPTIVAI----ADQNSVPCLRALAANKQTILIPQVAYTYSTTVSPAVQE
590 600 610 620 630
120 130 140 150 160 170
pF1KB7 PPAASASAAASGGEDE-EEASSPDSGHLKD-GIRRGRPRADTVRDLINEGEHSSSRIRCN
:: . .:..:: ...:: ....: . . : .: : : .. :.
NP_001 PPLKVIQP--NGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTEN-GMYA-----CD
640 650 660 670 680
180 190 200 210 220 230
pF1KB7 ICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSEN
.:...: . .:: :: :::.::. : : ::: .. .: :.:::.::::. :..
NP_001 LCDKIFQKSSSLLRHKYEHTGKRPHECGI--CKKAFKHKHHLIEHMRLHSGEKPYQCDK-
690 700 710 720 730 740
240 250 260 270 280
pF1KB7 GCLSRFTHANRHCPK--HPYARLKRE-EPTDTLSKHQAADNKAAAEWL-ARYWEMR---E
: .::.:.. . . : :. ::: : :. ...:. . . : . :: . .
NP_001 -CGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEILSNEHVGARASPSQGDSD
750 760 770 780 790 800
290 300 310 320 330 340
pF1KB7 QRTPTLK--GKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELA
.: . . .: ..:.. .: :: ..: .. .: ... .:..:
NP_001 ERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENE
810 820 830 840 850 860
350
pF1KB7 NLTGAPLRQ
NP_001 GEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEKTNEA
870 880 890 900
>>NP_001310581 (OMIM: 189909,609141,613270) zinc finger (906 aa)
initn: 234 init1: 127 opt: 301 Z-score: 173.9 bits: 42.0 E(85289): 0.006
Smith-Waterman score: 302; 25.5% identity (53.1% similar) in 318 aa overlap (32-329:552-853)
10 20 30 40 50
pF1KB7 IRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPE----PPP--P
.: . : : .: .:: :: :
NP_001 PKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVIPPSANP
530 540 550 560 570 580
60 70 80 90 100 110
pF1KB7 L---IPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAP
. ::: . .: . ..: . :. . .: .: . . .
NP_001 INIAIPTVTAQLPTIVAI----ADQNSVPCLRALAANKQTILIPQVAYTYSTTVSPAVQE
590 600 610 620 630
120 130 140 150 160 170
pF1KB7 PPAASASAAASGGEDE-EEASSPDSGHLKD-GIRRGRPRADTVRDLINEGEHSSSRIRCN
:: . .:..:: ...:: ....: . . : .: : : .. :.
NP_001 PPLKVIQP--NGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTEN-GMYA-----CD
640 650 660 670 680
180 190 200 210 220 230
pF1KB7 ICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSEN
.:...: . .:: :: :::.::. : : ::: .. .: :.:::.::::. :..
NP_001 LCDKIFQKSSSLLRHKYEHTGKRPHECGI--CKKAFKHKHHLIEHMRLHSGEKPYQCDK-
690 700 710 720 730 740
240 250 260 270 280
pF1KB7 GCLSRFTHANRHCPK--HPYARLKRE-EPTDTLSKHQAADNKAAAEWL-ARYWEMR---E
: .::.:.. . . : :. ::: : :. ...:. . . : . :: . .
NP_001 -CGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEILSNEHVGARASPSQGDSD
750 760 770 780 790 800
290 300 310 320 330 340
pF1KB7 QRTPTLK--GKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELA
.: . . .: ..:.. .: :: ..: .. .: ... .:..:
NP_001 ERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENE
810 820 830 840 850 860
350
pF1KB7 NLTGAPLRQ
NP_001 GEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEKTNEA
870 880 890 900
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:28:11 2016 done: Sun Nov 6 05:28:13 2016
Total Scan time: 10.020 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]