Result of FASTA (ccds) for
pFN21AB7645
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7645, 328 aa
1>>>pF1KB7645 328 - 328 aa - 328 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4514+/-0.000801; mu= 5.2179+/- 0.049
mean_var=235.6011+/-49.159, 0's: 0 Z-trim(116.4): 165 B-trim: 965 in 1/52
Lambda= 0.083558
statistics sampled from 16833 (17015) to 16833 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.523), width: 16
Scan time: 2.980
The best scores are: opt bits E(32554)
CCDS2248.1 DLX2 gene_id:1746|Hs108|chr2 ( 328) 2256 283.9 1.2e-76
CCDS5647.1 DLX5 gene_id:1749|Hs108|chr7 ( 289) 783 106.3 3.1e-23
CCDS11556.1 DLX3 gene_id:1747|Hs108|chr17 ( 287) 735 100.5 1.7e-21
CCDS47647.2 DLX6 gene_id:1750|Hs108|chr7 ( 293) 536 76.5 2.9e-14
CCDS2247.2 DLX1 gene_id:1745|Hs108|chr2 ( 255) 471 68.6 6e-12
>>CCDS2248.1 DLX2 gene_id:1746|Hs108|chr2 (328 aa)
initn: 2256 init1: 2256 opt: 2256 Z-score: 1489.5 bits: 283.9 E(32554): 1.2e-76
Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL
250 260 270 280 290 300
310 320
pF1KB7 HPTQTPQPHHHHHHHGGGGAPVSAGTIF
::::::::::::::::::::::::::::
CCDS22 HPTQTPQPHHHHHHHGGGGAPVSAGTIF
310 320
>>CCDS5647.1 DLX5 gene_id:1749|Hs108|chr7 (289 aa)
initn: 713 init1: 600 opt: 783 Z-score: 530.6 bits: 106.3 E(32554): 3.1e-23
Smith-Waterman score: 783; 52.6% identity (70.7% similar) in 270 aa overlap (43-302:23-280)
20 30 40 50 60 70
pF1KB7 HSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKP-QESPTLPVSTATDSSYYTNQQ
.:...:.: ::::::: :.::::.::.
CCDS56 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYS---
10 20 30 40
80 90 100 110 120
pF1KB7 HPAGGGGGGG-SPY-AHMGS----YQYQASGLNNVP--YSAKSSYDLGYTAAYTSYAPYG
:.::. : :: : .:. :::: :.:. : ::. : .:...: .:.
CCDS56 -PTGGAPHGYCSPTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAY
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
. :.:.:::: :::.:.:::::::::::::::::::::::::::::::::::::::
CCDS56 NRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDF
:::::::::::::::::::.:::.::. :.::.: :. :..: : :: ..:: :.
CCDS56 ELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP--QSPAVWE-
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB7 GVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SHLQATAPLLHP
:: :.. : : :. : :.: . .. :: ....: ::: . : ::
CCDS56 --PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHP
230 240 250 260 270 280
310 320
pF1KB7 TQTPQPHHHHHHHGGGGAPVSAGTIF
CCDS56 LALASGTLY
>>CCDS11556.1 DLX3 gene_id:1747|Hs108|chr17 (287 aa)
initn: 668 init1: 532 opt: 735 Z-score: 499.3 bits: 100.5 E(32554): 1.7e-21
Smith-Waterman score: 754; 47.8% identity (65.4% similar) in 295 aa overlap (42-328:17-287)
20 30 40 50 60 70
pF1KB7 MHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHK-PQESPTLPVSTATDSSYYTNQ
::: : : ..::::: :..:: .::.
CCDS11 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAP
10 20 30 40
80 90 100 110 120
pF1KB7 QHPAGGGGGGG---SPYAHMGSYQYQASGLNNV-PYSAKSSYDLGYTAAYTSYAPYGTSS
:: .: : .::.. .:.. .:: .. :: :: : : :.: .:. : .
CCDS11 QHDYYSGQPYGQTVNPYTY--HHQFNLNGLAGTGAYSPKSEYTYG--ASYRQYGAYREQP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 SPANNEPE-KEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAEL
::.. ::. : :.:.:::::::::::::::::.:::::::::::.:::::::::::
CCDS11 LPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 AASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDFGV
::.:::::::::::::::::::::..:.::.: :. :. : : : ::: .:: ::
CCDS11 AAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPP--SPALWD---
170 180 190 200 210
250 260 270 280 290 300
pF1KB7 PQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGN--YPWYHQTSGSASHLQATAPLLHPT
.. . :. . : : ::. ..: . ::: . :. :::
CCDS11 ---TSSHSTPAPARSQLPPP--LPYSASPSYLDDPTNSWYHAQNLSGPHLQQ--------
220 230 240 250 260
310 320
pF1KB7 QTPQPHHHHHHHGGGGAPVSAGTIF
: ::: : :.. : : . :...
CCDS11 QPPQPATLH--HASPGPPPNPGAVY
270 280
>>CCDS47647.2 DLX6 gene_id:1750|Hs108|chr7 (293 aa)
initn: 504 init1: 399 opt: 536 Z-score: 369.6 bits: 76.5 E(32554): 2.9e-14
Smith-Waterman score: 536; 41.9% identity (63.3% similar) in 248 aa overlap (24-269:40-282)
10 20 30 40 50
pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQES
.:.:::: : .:..:: .
CCDS47 GLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQSSPAMAGAHY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 PTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYT
: . .:. .. ...: ::::: :. .:. .: :: ..:...
CCDS47 PLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK
. ..: : : .. .... . :::. ::: ::.:::::::::.:: ::..:::.
CCDS47 SYHNSSAAAQTRGDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQLQALNHRFQQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHP--GASASPPCA
:::::::::::::::::::::::::::::.::::::. :.: : :. : :..: :
CCDS47 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQGSAALSP-R
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 SPPVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSAS
:: . : :: .. . .. :.: : . :::
CCDS47 SPAL--PPVWDVSASAKGVSMP-PNSYMPGYSHWYSSPHQDTMQRPQMM
250 260 270 280 290
300 310 320
pF1KB7 HLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF
>>CCDS2247.2 DLX1 gene_id:1745|Hs108|chr2 (255 aa)
initn: 426 init1: 394 opt: 471 Z-score: 328.0 bits: 68.6 E(32554): 6e-12
Smith-Waterman score: 471; 44.4% identity (63.8% similar) in 232 aa overlap (51-275:29-248)
30 40 50 60 70 80
pF1KB7 STYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGGG
: ::. :.: . : . : :: .
CCDS22 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPS-PMS---HGHYSMHCLHSAGHSQPD
10 20 30 40 50
90 100 110 120 130
pF1KB7 GSPYAHMGSYQYQASG--LNNVPYSAKSSYDLGYTAAYTSYAPYGTSS--SPANNEPEKE
:. :. .:.. . .:.: :.: : .. . .: . : . : .:. . ..
CCDS22 GA-YSSASSFSRPLGYPYVNSVSSHASSPY-ISSVQSYPGSASLAQSRLEDPGADSEKST
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB7 DLEP-EIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
.: :.:. ::: ::.:::::::::.:: ::.::::.::::::::::::::::::::::
CCDS22 VVEGGEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQ
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB7 VKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCA-SPPVSAPASWDFGVPQRMAGGGG
:::::::.::::::. :.: : :.. : :::: : .:. :. .: :.
CCDS22 VKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPV--PPGWN---PNSSSGKGS
180 190 200 210 220
260 270 280 290 300 310
pF1KB7 PGSGGSGAGSSGS-SPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHH
:..:: : : ::. :
CCDS22 GGNAGSYIPSYTSWYPSAHQEAMQQPQLM
230 240 250
328 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:30:30 2016 done: Sun Nov 6 05:30:30 2016
Total Scan time: 2.980 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]