Result of FASTA (omim) for
pFN21AB7609
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7609, 300 aa
1>>>pF1KB7609 300 - 300 aa - 300 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2649+/-0.000348; mu= 16.0646+/- 0.022
mean_var=71.6232+/-14.128, 0's: 0 Z-trim(114.9): 152 B-trim: 0 in 0/54
Lambda= 0.151547
statistics sampled from 24880 (25033) to 24880 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.294), width: 16
Scan time: 6.640
The best scores are: opt bits E(85289)
XP_011518287 (OMIM: 605439) PREDICTED: ETS homolog ( 300) 2109 470.1 2.4e-132
XP_005252917 (OMIM: 605439) PREDICTED: ETS homolog ( 300) 2109 470.1 2.4e-132
XP_011518286 (OMIM: 605439) PREDICTED: ETS homolog ( 300) 2109 470.1 2.4e-132
NP_036285 (OMIM: 605439) ETS homologous factor iso ( 300) 2109 470.1 2.4e-132
XP_011518285 (OMIM: 605439) PREDICTED: ETS homolog ( 303) 2109 470.1 2.4e-132
NP_001193545 (OMIM: 605439) ETS homologous factor ( 322) 2109 470.1 2.5e-132
XP_005252914 (OMIM: 605439) PREDICTED: ETS homolog ( 321) 2092 466.4 3.3e-131
XP_016873023 (OMIM: 605439) PREDICTED: ETS homolog ( 298) 1148 260.0 4.2e-69
NP_001193544 (OMIM: 605439) ETS homologous factor ( 277) 1141 258.4 1.1e-68
XP_005252919 (OMIM: 605439) PREDICTED: ETS homolog ( 277) 1141 258.4 1.1e-68
XP_005252918 (OMIM: 605439) PREDICTED: ETS homolog ( 299) 1141 258.4 1.2e-68
NP_001107781 (OMIM: 602191) ETS-related transcript ( 371) 581 136.1 1e-31
NP_004424 (OMIM: 602191) ETS-related transcription ( 371) 581 136.1 1e-31
NP_001230009 (OMIM: 605169) ETS-related transcript ( 160) 482 114.2 1.7e-25
NP_001230010 (OMIM: 605169) ETS-related transcript ( 187) 482 114.2 2e-25
XP_016872797 (OMIM: 605169) PREDICTED: ETS-related ( 238) 479 113.6 3.8e-25
NP_001413 (OMIM: 605169) ETS-related transcription ( 255) 479 113.7 4e-25
NP_938195 (OMIM: 605169) ETS-related transcription ( 265) 479 113.7 4.1e-25
XP_016872798 (OMIM: 605169) PREDICTED: ETS-related ( 232) 465 110.6 3.1e-24
NP_001230358 (OMIM: 165080) transcriptional regula ( 363) 346 84.7 3e-16
NP_001317954 (OMIM: 165080) transcriptional regula ( 455) 346 84.8 3.6e-16
NP_004440 (OMIM: 165080) transcriptional regulator ( 462) 346 84.8 3.6e-16
XP_011529610 (OMIM: 300775) PREDICTED: ETS-related ( 586) 321 79.4 1.9e-14
XP_011529609 (OMIM: 300775) PREDICTED: ETS-related ( 595) 321 79.4 2e-14
XP_005262446 (OMIM: 300775) PREDICTED: ETS-related ( 663) 321 79.4 2.1e-14
NP_001412 (OMIM: 300775) ETS-related transcription ( 663) 321 79.4 2.1e-14
NP_001120669 (OMIM: 300775) ETS-related transcript ( 663) 321 79.4 2.1e-14
XP_011533253 (OMIM: 189973) PREDICTED: ETS-related ( 560) 309 76.7 1.1e-13
NP_001138825 (OMIM: 189973) ETS-related transcript ( 595) 309 76.7 1.2e-13
XP_016875899 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
XP_016875898 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
XP_005266333 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
XP_005266334 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
NP_758961 (OMIM: 189973) ETS-related transcription ( 619) 309 76.8 1.2e-13
XP_016875900 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
XP_016875901 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
XP_016875902 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
XP_011533252 (OMIM: 189973) PREDICTED: ETS-related ( 619) 309 76.8 1.2e-13
NP_001239223 (OMIM: 608144) SAM pointed domain-con ( 319) 274 68.9 1.5e-11
NP_036523 (OMIM: 608144) SAM pointed domain-contai ( 335) 274 68.9 1.5e-11
XP_005249045 (OMIM: 608144) PREDICTED: SAM pointed ( 407) 274 69.0 1.8e-11
NP_001244097 (OMIM: 311040) ETS domain-containing ( 95) 265 66.6 2.2e-11
NP_005221 (OMIM: 600247) ETS domain-containing pro ( 407) 270 68.1 3.3e-11
XP_006719338 (OMIM: 600247) PREDICTED: ETS domain- ( 407) 270 68.1 3.3e-11
XP_011541004 (OMIM: 193067) PREDICTED: Friend leuk ( 410) 269 67.9 3.8e-11
NP_068567 (OMIM: 600246) ETS domain-containing pro ( 405) 267 67.4 5.2e-11
NP_001193970 (OMIM: 605255) transcription factor E ( 190) 263 66.3 5.2e-11
XP_016856069 (OMIM: 600246) PREDICTED: ETS domain- ( 413) 267 67.5 5.2e-11
XP_005245007 (OMIM: 600246) PREDICTED: ETS domain- ( 431) 267 67.5 5.4e-11
XP_005245008 (OMIM: 600246) PREDICTED: ETS domain- ( 431) 267 67.5 5.4e-11
>>XP_011518287 (OMIM: 605439) PREDICTED: ETS homologous (300 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2497.1 bits: 470.1 E(85289): 2.4e-132
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300)
10 20 30 40 50 60
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
250 260 270 280 290 300
>>XP_005252917 (OMIM: 605439) PREDICTED: ETS homologous (300 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2497.1 bits: 470.1 E(85289): 2.4e-132
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300)
10 20 30 40 50 60
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
250 260 270 280 290 300
>>XP_011518286 (OMIM: 605439) PREDICTED: ETS homologous (300 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2497.1 bits: 470.1 E(85289): 2.4e-132
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300)
10 20 30 40 50 60
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
250 260 270 280 290 300
>>NP_036285 (OMIM: 605439) ETS homologous factor isoform (300 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2497.1 bits: 470.1 E(85289): 2.4e-132
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300)
10 20 30 40 50 60
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
250 260 270 280 290 300
>>XP_011518285 (OMIM: 605439) PREDICTED: ETS homologous (303 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2497.0 bits: 470.1 E(85289): 2.4e-132
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:4-303)
10 20 30 40 50
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEIMILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 WLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 SSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 HLPVAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLPVAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVF
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 RFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRE
250 260 270 280 290 300
300
pF1KB7 NEN
:::
XP_011 NEN
>>NP_001193545 (OMIM: 605439) ETS homologous factor isof (322 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2496.7 bits: 470.1 E(85289): 2.5e-132
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:23-322)
10 20 30
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFF
::::::::::::::::::::::::::::::::::::::
NP_001 MGLPERRGLVLLLSLAEILFKIMILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 GGQWHEIHPQYWTKYQVWEWLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGQWHEIHPQYWTKYQVWEWLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 TAGQLLYSNLQHLKWNGQCSSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAGQLLYSNLQHLKWNGQCSSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 DLLDSKTFCRAQISMTTTSHLPVAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLLDSKTFCRAQISMTTTSHLPVAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 NPDKNPGLIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPDKNPGLIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILER
250 260 270 280 290 300
280 290 300
pF1KB7 VDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::
NP_001 VDGRRLVYKFGKNARGWRENEN
310 320
>>XP_005252914 (OMIM: 605439) PREDICTED: ETS homologous (321 aa)
initn: 1287 init1: 1287 opt: 2092 Z-score: 2476.6 bits: 466.4 E(85289): 3.3e-131
Smith-Waterman score: 2092; 99.7% identity (99.7% similar) in 300 aa overlap (1-300:23-321)
10 20 30
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFF
::::::::::::::::::::::::::::::::::::::
XP_005 MGLPERRGLVLLLSLAEILFKIMILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 GGQWHEIHPQYWTKYQVWEWLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGQWHEIHPQYWTKYQVWEWLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 TAGQLLYSNLQHLKWNGQCSSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TAGQLLYSNLQHLKWNGQCSSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 DLLDSKTFCRAQISMTTTSHLPVAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILL
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
XP_005 DLLDSKTFCRAQISMTTTSHLPV-ESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILL
190 200 210 220 230
220 230 240 250 260 270
pF1KB7 NPDKNPGLIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPDKNPGLIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILER
240 250 260 270 280 290
280 290 300
pF1KB7 VDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::
XP_005 VDGRRLVYKFGKNARGWRENEN
300 310 320
>>XP_016873023 (OMIM: 605439) PREDICTED: ETS homologous (298 aa)
initn: 1132 init1: 1132 opt: 1148 Z-score: 1361.6 bits: 260.0 E(85289): 4.2e-69
Smith-Waterman score: 1897; 92.0% identity (92.0% similar) in 300 aa overlap (1-300:23-298)
10 20 30
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFF
::::::::::::::::::::::::::::::::::::::
XP_016 MGLPERRGLVLLLSLAEILFKIMILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 GGQWHEIHPQYWTKYQVWEWLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQWHEIHPQYWTKYQVWEWLQHLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 TAGQLLYSNLQHLKWNGQCSSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAGQLLYSNLQHLKWNGQCSSDLFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 DLLDSKTFCRAQISMTTTSHLPVAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILL
::::::::::::::::::::::::::::::::::::
XP_016 ------------------------ESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILL
190 200 210
220 230 240 250 260 270
pF1KB7 NPDKNPGLIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPDKNPGLIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILER
220 230 240 250 260 270
280 290 300
pF1KB7 VDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::
XP_016 VDGRRLVYKFGKNARGWRENEN
280 290
>>NP_001193544 (OMIM: 605439) ETS homologous factor isof (277 aa)
initn: 1130 init1: 1130 opt: 1141 Z-score: 1353.8 bits: 258.4 E(85289): 1.1e-68
Smith-Waterman score: 1904; 92.3% identity (92.3% similar) in 300 aa overlap (1-300:1-277)
10 20 30 40 50 60
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
::::::::::::::::::::::::::::::::::::::
NP_001 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV----------------------
130 140 150
190 200 210 220 230 240
pF1KB7 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -AESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
220 230 240 250 260 270
>>XP_005252919 (OMIM: 605439) PREDICTED: ETS homologous (277 aa)
initn: 1130 init1: 1130 opt: 1141 Z-score: 1353.8 bits: 258.4 E(85289): 1.1e-68
Smith-Waterman score: 1904; 92.3% identity (92.3% similar) in 300 aa overlap (1-300:1-277)
10 20 30 40 50 60
pF1KB7 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MILEGGGVMNLNPGNNLLHQPPAWTDSYSTCNVSSGFFGGQWHEIHPQYWTKYQVWEWLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HLLDTNQLDANCIPFQEFDINGEHLCSMSLQEFTRAAGTAGQLLYSNLQHLKWNGQCSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTVDLLDSKTFCRAQISMTTTSHLP
::::::::::::::::::::::::::::::::::::::
XP_005 LFQSTHNVIVKTEQTEPSIMNTWKDENYLYDTNYGSTV----------------------
130 140 150
190 200 210 220 230 240
pF1KB7 VAESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 -AESPDMKKEQDPPAKCHTKKHNPRGTHLWEFIRDILLNPDKNPGLIKWEDRSEGVFRFL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGKNARGWRENEN
220 230 240 250 260 270
300 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:11:16 2016 done: Sun Nov 6 15:11:17 2016
Total Scan time: 6.640 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]