Result of FASTA (omim) for
pFN21AB7504
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7504, 238 aa
1>>>pF1KB7504 238 - 238 aa - 238 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6176+/-0.000291; mu= 5.9924+/- 0.018
mean_var=196.8198+/-40.646, 0's: 0 Z-trim(123.6): 151 B-trim: 0 in 0/59
Lambda= 0.091420
statistics sampled from 43685 (43843) to 43685 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.514), width: 16
Scan time: 7.770
The best scores are: opt bits E(85289)
NP_059991 (OMIM: 607150) protein FEV [Homo sapiens ( 238) 1659 230.1 2.6e-60
NP_001257941 (OMIM: 193067) Friend leukemia integr ( 259) 623 93.5 3.8e-19
NP_001257939 (OMIM: 193067) Friend leukemia integr ( 386) 623 93.7 5e-19
XP_011541004 (OMIM: 193067) PREDICTED: Friend leuk ( 410) 623 93.7 5.2e-19
XP_011541003 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 623 93.7 5.3e-19
XP_016872894 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 623 93.7 5.3e-19
NP_001161153 (OMIM: 193067) Friend leukemia integr ( 419) 623 93.7 5.3e-19
XP_016872895 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 623 93.7 5.3e-19
NP_002008 (OMIM: 193067) Friend leukemia integrati ( 452) 623 93.7 5.5e-19
NP_001230358 (OMIM: 165080) transcriptional regula ( 363) 611 92.1 1.4e-18
NP_001129627 (OMIM: 165080) transcriptional regula ( 387) 611 92.1 1.5e-18
XP_016883778 (OMIM: 165080) PREDICTED: transcripti ( 428) 611 92.1 1.6e-18
XP_011527788 (OMIM: 165080) PREDICTED: transcripti ( 435) 611 92.1 1.6e-18
NP_001317954 (OMIM: 165080) transcriptional regula ( 455) 611 92.2 1.7e-18
XP_016883776 (OMIM: 165080) PREDICTED: transcripti ( 459) 611 92.2 1.7e-18
NP_004440 (OMIM: 165080) transcriptional regulator ( 462) 611 92.2 1.7e-18
NP_891548 (OMIM: 165080) transcriptional regulator ( 479) 611 92.2 1.7e-18
NP_001129626 (OMIM: 165080) transcriptional regula ( 486) 611 92.2 1.7e-18
NP_001230357 (OMIM: 165080) transcriptional regula ( 486) 611 92.2 1.7e-18
NP_006485 (OMIM: 600775,611888) ETS domain-contain ( 548) 449 70.9 5.1e-12
NP_001155894 (OMIM: 164720) protein C-ets-1 isofor ( 225) 438 69.0 7.5e-12
NP_001317380 (OMIM: 164720) protein C-ets-1 isofor ( 354) 438 69.2 1e-11
XP_016872806 (OMIM: 164720) PREDICTED: protein C-e ( 398) 438 69.3 1.1e-11
XP_016872805 (OMIM: 164720) PREDICTED: protein C-e ( 418) 438 69.3 1.2e-11
XP_011540953 (OMIM: 164720) PREDICTED: protein C-e ( 432) 438 69.3 1.2e-11
NP_005229 (OMIM: 164720) protein C-ets-1 isoform 2 ( 441) 438 69.3 1.2e-11
XP_016872804 (OMIM: 164720) PREDICTED: protein C-e ( 450) 438 69.3 1.2e-11
XP_011540952 (OMIM: 164720) PREDICTED: protein C-e ( 475) 438 69.4 1.3e-11
NP_001137292 (OMIM: 164720) protein C-ets-1 isofor ( 485) 438 69.4 1.3e-11
XP_016872803 (OMIM: 164720) PREDICTED: protein C-e ( 485) 438 69.4 1.3e-11
XP_011540951 (OMIM: 164720) PREDICTED: protein C-e ( 519) 438 69.4 1.3e-11
XP_005260992 (OMIM: 164740) PREDICTED: protein C-e ( 469) 437 69.2 1.4e-11
NP_005230 (OMIM: 164740) protein C-ets-2 isoform 1 ( 469) 437 69.2 1.4e-11
XP_016883779 (OMIM: 164740) PREDICTED: protein C-e ( 469) 437 69.2 1.4e-11
NP_001243224 (OMIM: 164740) protein C-ets-2 isofor ( 609) 437 69.3 1.7e-11
NP_005231 (OMIM: 164873) ETS translocation variant ( 143) 398 63.6 2.1e-10
XP_005260995 (OMIM: 600609) PREDICTED: GA-binding ( 454) 406 65.1 2.3e-10
XP_011527823 (OMIM: 600609) PREDICTED: GA-binding ( 454) 406 65.1 2.3e-10
XP_011527822 (OMIM: 600609) PREDICTED: GA-binding ( 454) 406 65.1 2.3e-10
NP_002031 (OMIM: 600609) GA-binding protein alpha ( 454) 406 65.1 2.3e-10
XP_016883802 (OMIM: 600609) PREDICTED: GA-binding ( 454) 406 65.1 2.3e-10
NP_001184226 (OMIM: 600609) GA-binding protein alp ( 454) 406 65.1 2.3e-10
XP_006711273 (OMIM: 164873) PREDICTED: ETS translo ( 512) 398 64.1 5.2e-10
NP_001138784 (OMIM: 164873) ETS translocation vari ( 512) 398 64.1 5.2e-10
XP_016884828 (OMIM: 311040) PREDICTED: ETS domain- ( 428) 395 63.6 6e-10
NP_005220 (OMIM: 311040) ETS domain-containing pro ( 428) 395 63.6 6e-10
NP_001107595 (OMIM: 311040) ETS domain-containing ( 428) 395 63.6 6e-10
NP_001291478 (OMIM: 609358) ETS translocation vari ( 155) 378 61.0 1.4e-09
NP_004445 (OMIM: 601600) ETS translocation variant ( 510) 385 62.4 1.7e-09
NP_001156624 (OMIM: 600541) ETS translocation vari ( 374) 382 61.9 1.8e-09
>>NP_059991 (OMIM: 607150) protein FEV [Homo sapiens] (238 aa)
initn: 1659 init1: 1659 opt: 1659 Z-score: 1203.7 bits: 230.1 E(85289): 2.6e-60
Smith-Waterman score: 1659; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KB7 MRQSGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQKGSGQIQLWQFLLELLADR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 MRQSGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQKGSGQIQLWQFLLELLADR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 ANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 RYAYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGLSKLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 RYAYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGLSKLNL
130 140 150 160 170 180
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
190 200 210 220 230
>>NP_001257941 (OMIM: 193067) Friend leukemia integratio (259 aa)
initn: 665 init1: 605 opt: 623 Z-score: 464.8 bits: 93.5 E(85289): 3.8e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:74-259)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
NP_001 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
50 60 70 80 90 100
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
110 120 130 140 150 160
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
NP_001 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
170 180 190 200
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
NP_001 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
210 220 230 240 250
>>NP_001257939 (OMIM: 193067) Friend leukemia integratio (386 aa)
initn: 629 init1: 605 opt: 623 Z-score: 462.7 bits: 93.7 E(85289): 5e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:201-386)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
NP_001 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
180 190 200 210 220 230
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
240 250 260 270 280 290
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
NP_001 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
300 310 320 330
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
NP_001 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
340 350 360 370 380
>>XP_011541004 (OMIM: 193067) PREDICTED: Friend leukemia (410 aa)
initn: 629 init1: 605 opt: 623 Z-score: 462.3 bits: 93.7 E(85289): 5.2e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:225-410)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
XP_011 RESSLLAYNTTSHTDQSSRLSVKEDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
200 210 220 230 240 250
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_011 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
260 270 280 290 300 310
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
XP_011 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
320 330 340 350
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
XP_011 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
360 370 380 390 400 410
>>XP_011541003 (OMIM: 193067) PREDICTED: Friend leukemia (419 aa)
initn: 629 init1: 605 opt: 623 Z-score: 462.2 bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
XP_011 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
210 220 230 240 250 260
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_011 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
270 280 290 300 310 320
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
XP_011 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
330 340 350 360
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
XP_011 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
370 380 390 400 410
>>XP_016872894 (OMIM: 193067) PREDICTED: Friend leukemia (419 aa)
initn: 629 init1: 605 opt: 623 Z-score: 462.2 bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
XP_016 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
210 220 230 240 250 260
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_016 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
270 280 290 300 310 320
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
XP_016 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
330 340 350 360
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
XP_016 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
370 380 390 400 410
>>NP_001161153 (OMIM: 193067) Friend leukemia integratio (419 aa)
initn: 629 init1: 605 opt: 623 Z-score: 462.2 bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
NP_001 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
210 220 230 240 250 260
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
270 280 290 300 310 320
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
NP_001 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
330 340 350 360
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
NP_001 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
370 380 390 400 410
>>XP_016872895 (OMIM: 193067) PREDICTED: Friend leukemia (419 aa)
initn: 629 init1: 605 opt: 623 Z-score: 462.2 bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
XP_016 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
210 220 230 240 250 260
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_016 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
270 280 290 300 310 320
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
XP_016 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
330 340 350 360
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
XP_016 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
370 380 390 400 410
>>NP_002008 (OMIM: 193067) Friend leukemia integration 1 (452 aa)
initn: 629 init1: 605 opt: 623 Z-score: 461.8 bits: 93.7 E(85289): 5.5e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:267-452)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: ::
NP_002 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
240 250 260 270 280 290
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
:.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_002 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
300 310 320 330 340 350
130 140 150 160 170 180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
::.:::.:.::: :: :. ....:: :. .. .: .:.:.
NP_002 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
360 370 380 390 400
190 200 210 220 230
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
. . :. : . : . . .. :...::.:.. :. . ::::..:
NP_002 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY
410 420 430 440 450
>>NP_001230358 (OMIM: 165080) transcriptional regulator (363 aa)
initn: 637 init1: 596 opt: 611 Z-score: 454.4 bits: 92.1 E(85289): 1.4e-18
Smith-Waterman score: 640; 51.7% identity (68.7% similar) in 211 aa overlap (34-237:181-363)
10 20 30 40 50 60
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
:: : . . :::::::::::::::.: .:
NP_001 TPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSN
160 170 180 190 200 210
70 80 90 100 110 120
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
..::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 SSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
220 230 240 250 260 270
130 140 150 160 170
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGL-----SK
::.:::.:.::: :: : ...::: :. ::. : .:
NP_001 AYKFDFHGIAQALQPHPP----------------ESSLYKYPSD---LPYMGSYHAHPQK
280 290 300 310
180 190 200 210 220 230
pF1KB7 LNLMAASAGVAPA-GFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGH
.:..: . :. . :.. .:.: .. :...::. : : :::: .
NP_001 MNFVAPHPPALPVTSSSFFAAPNPYWNSP--TGGIYPNTRLPTSHMP-------SHLGTY
320 330 340 350 360
pF1KB7 YH
:
NP_001 Y
238 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:37:25 2016 done: Mon Nov 7 00:37:26 2016
Total Scan time: 7.770 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]