Result of FASTA (omim) for
pFN21AB7117
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7117, 283 aa
1>>>pF1KB7117 283 - 283 aa - 283 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1639+/-0.000332; mu= 15.4603+/- 0.021
mean_var=59.9780+/-12.119, 0's: 0 Z-trim(114.5): 47 B-trim: 63 in 2/49
Lambda= 0.165607
statistics sampled from 24357 (24404) to 24357 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.286), width: 16
Scan time: 6.540
The best scores are: opt bits E(85289)
XP_016884897 (OMIM: 302800,304040) PREDICTED: gap ( 283) 1920 467.0 1.8e-131
XP_011529209 (OMIM: 302800,304040) PREDICTED: gap ( 283) 1920 467.0 1.8e-131
NP_001091111 (OMIM: 302800,304040) gap junction be ( 283) 1920 467.0 1.8e-131
NP_000157 (OMIM: 302800,304040) gap junction beta- ( 283) 1920 467.0 1.8e-131
XP_016875847 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
XP_016875846 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
NP_006774 (OMIM: 129500,220290,304400,604418,61264 ( 261) 1077 265.6 7.2e-71
NP_001103691 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
NP_001103689 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
XP_016875849 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
NP_001103690 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
XP_016875848 (OMIM: 129500,220290,304400,604418,61 ( 261) 1077 265.6 7.2e-71
NP_003995 (OMIM: 121011,124500,148210,148350,14920 ( 226) 1071 264.1 1.7e-70
XP_011533351 (OMIM: 121011,124500,148210,148350,14 ( 226) 1071 264.1 1.7e-70
NP_694944 (OMIM: 133200,605425) gap junction beta- ( 266) 876 217.5 2.1e-56
XP_011538981 (OMIM: 133200,605425) PREDICTED: gap ( 266) 876 217.5 2.1e-56
NP_005259 (OMIM: 604493) gap junction beta-5 prote ( 273) 855 212.5 6.9e-55
XP_005270808 (OMIM: 604493) PREDICTED: gap junctio ( 273) 855 212.5 6.9e-55
NP_076872 (OMIM: 133200,220290,603324,612644) gap ( 270) 850 211.3 1.6e-54
NP_001005752 (OMIM: 133200,220290,603324,612644) g ( 270) 850 211.3 1.6e-54
NP_689343 (OMIM: 607425) gap junction delta-3 prot ( 294) 531 135.1 1.5e-31
NP_699199 (OMIM: 611922) gap junction delta-4 prot ( 370) 502 128.3 2.2e-29
NP_940970 (OMIM: 611921) gap junction beta-7 prote ( 223) 464 119.1 7.7e-27
XP_005248773 (OMIM: 611921) PREDICTED: gap junctio ( 223) 464 119.1 7.7e-27
XP_011507719 (OMIM: 116200,600897,612474) PREDICTE ( 427) 464 119.2 1.3e-26
NP_005258 (OMIM: 116200,600897,612474) gap junctio ( 433) 464 119.2 1.4e-26
XP_011507718 (OMIM: 116200,600897,612474) PREDICTE ( 433) 464 119.2 1.4e-26
NP_853516 (OMIM: 611925) gap junction gamma-3 prot ( 279) 451 116.0 8e-26
NP_068773 (OMIM: 121015,601885) gap junction alpha ( 435) 447 115.2 2.3e-25
XP_011533350 (OMIM: 121015,601885) PREDICTED: gap ( 435) 447 115.2 2.3e-25
XP_016856532 (OMIM: 121012) PREDICTED: gap junctio ( 333) 439 113.2 6.8e-25
XP_005270807 (OMIM: 121012) PREDICTED: gap junctio ( 333) 439 113.2 6.8e-25
NP_002051 (OMIM: 121012) gap junction alpha-4 prot ( 333) 439 113.2 6.8e-25
XP_005273008 (OMIM: 108770,121013,612474,614049) P ( 358) 436 112.5 1.2e-24
XP_016856533 (OMIM: 108770,121013,612474,614049) P ( 358) 436 112.5 1.2e-24
NP_005257 (OMIM: 108770,121013,612474,614049) gap ( 358) 436 112.5 1.2e-24
NP_859054 (OMIM: 108770,121013,612474,614049) gap ( 358) 436 112.5 1.2e-24
NP_000156 (OMIM: 104100,121014,133200,164200,18610 ( 382) 426 110.1 6.6e-24
NP_115991 (OMIM: 611924) gap junction alpha-10 pro ( 543) 413 107.1 7.6e-23
NP_110399 (OMIM: 611923) gap junction alpha-9 prot ( 515) 409 106.1 1.4e-22
NP_005488 (OMIM: 608655) gap junction gamma-1 prot ( 396) 386 100.6 5.1e-21
NP_001073852 (OMIM: 608655) gap junction gamma-1 p ( 396) 386 100.6 5.1e-21
XP_005256978 (OMIM: 608655) PREDICTED: gap junctio ( 396) 386 100.6 5.1e-21
XP_005256977 (OMIM: 608655) PREDICTED: gap junctio ( 396) 386 100.6 5.1e-21
NP_065711 (OMIM: 607058) gap junction delta-2 prot ( 321) 377 98.4 1.9e-20
NP_065168 (OMIM: 608803,608804,613206,613480) gap ( 439) 370 96.8 7.9e-20
XP_016877927 (OMIM: 607058) PREDICTED: gap junctio ( 270) 231 63.4 5.2e-10
>>XP_016884897 (OMIM: 302800,304040) PREDICTED: gap junc (283 aa)
initn: 1920 init1: 1920 opt: 1920 Z-score: 2481.3 bits: 467.0 E(85289): 1.8e-131
Smith-Waterman score: 1920; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
190 200 210 220 230 240
250 260 270 280
pF1KB7 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
:::::::::::::::::::::::::::::::::::::::::::
XP_016 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
250 260 270 280
>>XP_011529209 (OMIM: 302800,304040) PREDICTED: gap junc (283 aa)
initn: 1920 init1: 1920 opt: 1920 Z-score: 2481.3 bits: 467.0 E(85289): 1.8e-131
Smith-Waterman score: 1920; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
190 200 210 220 230 240
250 260 270 280
pF1KB7 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
:::::::::::::::::::::::::::::::::::::::::::
XP_011 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
250 260 270 280
>>NP_001091111 (OMIM: 302800,304040) gap junction beta-1 (283 aa)
initn: 1920 init1: 1920 opt: 1920 Z-score: 2481.3 bits: 467.0 E(85289): 1.8e-131
Smith-Waterman score: 1920; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
190 200 210 220 230 240
250 260 270 280
pF1KB7 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
:::::::::::::::::::::::::::::::::::::::::::
NP_001 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
250 260 270 280
>>NP_000157 (OMIM: 302800,304040) gap junction beta-1 pr (283 aa)
initn: 1920 init1: 1920 opt: 1920 Z-score: 2481.3 bits: 467.0 E(85289): 1.8e-131
Smith-Waterman score: 1920; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLS
190 200 210 220 230 240
250 260 270 280
pF1KB7 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
:::::::::::::::::::::::::::::::::::::::::::
NP_000 PEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
250 260 270 280
>>XP_016875847 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 1008 init1: 511 opt: 1077 Z-score: 1393.3 bits: 265.6 E(85289): 7.2e-71
Smith-Waterman score: 1077; 58.0% identity (85.1% similar) in 255 aa overlap (1-254:1-250)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
:.: :.:...:::.:::.::.::..::::::.:.:::::. :::::. .:.::::::::
XP_016 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE
..::::.:::.::.:::.::::.:::::::::::::. .: .:. : : ..: .:.
XP_016 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC
.:..::.: :.:::::. :. ::..:::.::::::.:: :: . ..:: . :::: :::
XP_016 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL
:.::::::::::.::..:: ::..:::::. ::....: ::..: .. .. . : :
XP_016 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPN----HAL
190 200 210 220 230
240 250 260 270 280
pF1KB7 SPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
. : ::::.:.:.:.
XP_016 K-ESKQNEMNELISDSGQNAITGFPS
240 250 260
>>XP_016875846 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 1008 init1: 511 opt: 1077 Z-score: 1393.3 bits: 265.6 E(85289): 7.2e-71
Smith-Waterman score: 1077; 58.0% identity (85.1% similar) in 255 aa overlap (1-254:1-250)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
:.: :.:...:::.:::.::.::..::::::.:.:::::. :::::. .:.::::::::
XP_016 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE
..::::.:::.::.:::.::::.:::::::::::::. .: .:. : : ..: .:.
XP_016 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC
.:..::.: :.:::::. :. ::..:::.::::::.:: :: . ..:: . :::: :::
XP_016 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL
:.::::::::::.::..:: ::..:::::. ::....: ::..: .. .. . : :
XP_016 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPN----HAL
190 200 210 220 230
240 250 260 270 280
pF1KB7 SPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
. : ::::.:.:.:.
XP_016 K-ESKQNEMNELISDSGQNAITGFPS
240 250 260
>>NP_006774 (OMIM: 129500,220290,304400,604418,612643,61 (261 aa)
initn: 1008 init1: 511 opt: 1077 Z-score: 1393.3 bits: 265.6 E(85289): 7.2e-71
Smith-Waterman score: 1077; 58.0% identity (85.1% similar) in 255 aa overlap (1-254:1-250)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
:.: :.:...:::.:::.::.::..::::::.:.:::::. :::::. .:.::::::::
NP_006 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE
..::::.:::.::.:::.::::.:::::::::::::. .: .:. : : ..: .:.
NP_006 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC
.:..::.: :.:::::. :. ::..:::.::::::.:: :: . ..:: . :::: :::
NP_006 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL
:.::::::::::.::..:: ::..:::::. ::....: ::..: .. .. . : :
NP_006 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPN----HAL
190 200 210 220 230
240 250 260 270 280
pF1KB7 SPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
. : ::::.:.:.:.
NP_006 K-ESKQNEMNELISDSGQNAITGFPS
240 250 260
>>NP_001103691 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 1008 init1: 511 opt: 1077 Z-score: 1393.3 bits: 265.6 E(85289): 7.2e-71
Smith-Waterman score: 1077; 58.0% identity (85.1% similar) in 255 aa overlap (1-254:1-250)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
:.: :.:...:::.:::.::.::..::::::.:.:::::. :::::. .:.::::::::
NP_001 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE
..::::.:::.::.:::.::::.:::::::::::::. .: .:. : : ..: .:.
NP_001 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC
.:..::.: :.:::::. :. ::..:::.::::::.:: :: . ..:: . :::: :::
NP_001 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL
:.::::::::::.::..:: ::..:::::. ::....: ::..: .. .. . : :
NP_001 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPN----HAL
190 200 210 220 230
240 250 260 270 280
pF1KB7 SPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
. : ::::.:.:.:.
NP_001 K-ESKQNEMNELISDSGQNAITGFPS
240 250 260
>>NP_001103689 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 1008 init1: 511 opt: 1077 Z-score: 1393.3 bits: 265.6 E(85289): 7.2e-71
Smith-Waterman score: 1077; 58.0% identity (85.1% similar) in 255 aa overlap (1-254:1-250)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
:.: :.:...:::.:::.::.::..::::::.:.:::::. :::::. .:.::::::::
NP_001 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE
..::::.:::.::.:::.::::.:::::::::::::. .: .:. : : ..: .:.
NP_001 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC
.:..::.: :.:::::. :. ::..:::.::::::.:: :: . ..:: . :::: :::
NP_001 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL
:.::::::::::.::..:: ::..:::::. ::....: ::..: .. .. . : :
NP_001 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPN----HAL
190 200 210 220 230
240 250 260 270 280
pF1KB7 SPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
. : ::::.:.:.:.
NP_001 K-ESKQNEMNELISDSGQNAITGFPS
240 250 260
>>XP_016875849 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 1008 init1: 511 opt: 1077 Z-score: 1393.3 bits: 265.6 E(85289): 7.2e-71
Smith-Waterman score: 1077; 58.0% identity (85.1% similar) in 255 aa overlap (1-254:1-250)
10 20 30 40 50 60
pF1KB7 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC
:.: :.:...:::.:::.::.::..::::::.:.:::::. :::::. .:.::::::::
XP_016 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE
..::::.:::.::.:::.::::.:::::::::::::. .: .:. : : ..: .:.
XP_016 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC
.:..::.: :.:::::. :. ::..:::.::::::.:: :: . ..:: . :::: :::
XP_016 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL
:.::::::::::.::..:: ::..:::::. ::....: ::..: .. .. . : :
XP_016 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPN----HAL
190 200 210 220 230
240 250 260 270 280
pF1KB7 SPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
. : ::::.:.:.:.
XP_016 K-ESKQNEMNELISDSGQNAITGFPS
240 250 260
283 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:24:07 2016 done: Sun Nov 6 23:24:09 2016
Total Scan time: 6.540 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]