Result of FASTA (omim) for
pFN21AB6993
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6993, 221 aa
1>>>pF1KB6993 221 - 221 aa - 221 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3388+/-0.000421; mu= 19.3402+/- 0.026
mean_var=74.6876+/-15.119, 0's: 0 Z-trim(112.7): 391 B-trim: 725 in 2/49
Lambda= 0.148406
statistics sampled from 21324 (21778) to 21324 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.255), width: 16
Scan time: 5.930
The best scores are: opt bits E(85289)
NP_899058 (OMIM: 603868,607624) ras-related protei ( 221) 1476 325.2 5.2e-89
XP_011520158 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1476 325.2 5.2e-89
XP_005254633 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1476 325.2 5.2e-89
XP_011520157 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1476 325.2 5.2e-89
XP_011520156 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1476 325.2 5.2e-89
XP_011520154 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1476 325.2 5.2e-89
NP_004571 (OMIM: 603868,607624) ras-related protei ( 221) 1476 325.2 5.2e-89
NP_899057 (OMIM: 603868,607624) ras-related protei ( 221) 1476 325.2 5.2e-89
NP_899059 (OMIM: 603868,607624) ras-related protei ( 221) 1476 325.2 5.2e-89
XP_016881403 (OMIM: 603869) PREDICTED: ras-related ( 218) 1064 237.0 1.8e-62
XP_005266790 (OMIM: 603869) PREDICTED: ras-related ( 218) 1064 237.0 1.8e-62
XP_016881402 (OMIM: 603869) PREDICTED: ras-related ( 218) 1064 237.0 1.8e-62
NP_004154 (OMIM: 603869) ras-related protein Rab-2 ( 218) 1064 237.0 1.8e-62
XP_006722581 (OMIM: 603869) PREDICTED: ras-related ( 182) 845 190.0 2.1e-48
XP_011524433 (OMIM: 603869) PREDICTED: ras-related ( 182) 845 190.0 2.1e-48
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 437 102.8 4.7e-22
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 435 102.4 6.4e-22
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 435 102.4 6.4e-22
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 425 100.2 2.9e-21
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 425 100.2 2.9e-21
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 422 99.6 4.4e-21
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 422 99.6 4.4e-21
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 403 95.5 7.1e-20
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 403 95.5 7.2e-20
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 398 94.4 1.5e-19
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 394 93.6 2.8e-19
NP_001157462 (OMIM: 609956) ras-related protein Ra ( 186) 379 90.3 2.3e-18
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 379 90.3 2.4e-18
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 379 90.4 2.6e-18
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 379 90.4 2.6e-18
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 379 90.4 2.7e-18
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 374 89.2 5.2e-18
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 371 88.6 8.1e-18
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 364 87.1 2.3e-17
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 362 86.7 2.9e-17
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 361 86.5 3.5e-17
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 362 86.8 3.6e-17
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 342 82.4 6.3e-16
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 341 82.2 7.2e-16
XP_011520752 (OMIM: 605455) PREDICTED: ras-related ( 140) 338 81.4 8.5e-16
XP_005251788 (OMIM: 611344) PREDICTED: ras and EF- ( 611) 344 83.4 9e-16
XP_005251787 (OMIM: 611344) PREDICTED: ras and EF- ( 717) 344 83.5 1e-15
NP_689786 (OMIM: 611344) ras and EF-hand domain-co ( 740) 344 83.5 1e-15
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188) 338 81.5 1e-15
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 338 81.6 1.1e-15
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 334 80.7 1.9e-15
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 334 80.7 2.1e-15
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 332 80.3 2.7e-15
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 332 80.3 2.7e-15
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 328 79.4 4.9e-15
>>NP_899058 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
NP_899 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_011520158 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
XP_011 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_005254633 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
XP_005 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_011520157 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
XP_011 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_011520156 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
XP_011 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_011520154 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
XP_011 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>NP_004571 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
NP_004 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>NP_899057 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
NP_899 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>NP_899059 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1476 init1: 1476 opt: 1476 Z-score: 1719.1 bits: 325.2 E(85289): 5.2e-89
Smith-Waterman score: 1476; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_899 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
:::::::::::::::::::::::::::::::::::::::::
NP_899 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_016881403 (OMIM: 603869) PREDICTED: ras-related pro (218 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1242.4 bits: 237.0 E(85289): 1.8e-62
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-221:1-218)
10 20 30 40 50 60
pF1KB6 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
XP_016 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
XP_016 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
XP_016 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
130 140 150 160 170 180
190 200 210 220
pF1KB6 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
::::::.::.:. ::. : :: : . .:. . : :
XP_016 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
190 200 210
221 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:45:32 2016 done: Sun Nov 6 05:45:33 2016
Total Scan time: 5.930 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]