Result of FASTA (omim) for
pFN21AB6388
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6388, 301 aa
1>>>pF1KB6388 301 - 301 aa - 301 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3652+/-0.000322; mu= 6.8073+/- 0.020
mean_var=126.1244+/-25.241, 0's: 0 Z-trim(119.2): 11 B-trim: 0 in 0/57
Lambda= 0.114202
statistics sampled from 32855 (32868) to 32855 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.385), width: 16
Scan time: 7.440
The best scores are: opt bits E(85289)
NP_057037 (OMIM: 616759) nitric oxide synthase-int ( 301) 2015 342.6 5.6e-94
XP_016882341 (OMIM: 616759) PREDICTED: nitric oxid ( 301) 2015 342.6 5.6e-94
XP_016882340 (OMIM: 616759) PREDICTED: nitric oxid ( 301) 2015 342.6 5.6e-94
NP_001257889 (OMIM: 616759) nitric oxide synthase- ( 301) 2015 342.6 5.6e-94
XP_011525319 (OMIM: 616759) PREDICTED: nitric oxid ( 302) 2015 342.6 5.6e-94
XP_005259021 (OMIM: 616759) PREDICTED: nitric oxid ( 304) 1999 340.0 3.5e-93
XP_006723298 (OMIM: 616759) PREDICTED: nitric oxid ( 304) 1999 340.0 3.5e-93
XP_011525317 (OMIM: 616759) PREDICTED: nitric oxid ( 305) 1999 340.0 3.5e-93
>>NP_057037 (OMIM: 616759) nitric oxide synthase-interac (301 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1808.2 bits: 342.6 E(85289): 5.6e-94
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
250 260 270 280 290 300
pF1KB6 A
:
NP_057 A
>>XP_016882341 (OMIM: 616759) PREDICTED: nitric oxide sy (301 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1808.2 bits: 342.6 E(85289): 5.6e-94
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
250 260 270 280 290 300
pF1KB6 A
:
XP_016 A
>>XP_016882340 (OMIM: 616759) PREDICTED: nitric oxide sy (301 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1808.2 bits: 342.6 E(85289): 5.6e-94
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
250 260 270 280 290 300
pF1KB6 A
:
XP_016 A
>>NP_001257889 (OMIM: 616759) nitric oxide synthase-inte (301 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1808.2 bits: 342.6 E(85289): 5.6e-94
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVMQ
250 260 270 280 290 300
pF1KB6 A
:
NP_001 A
>>XP_011525319 (OMIM: 616759) PREDICTED: nitric oxide sy (302 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1808.1 bits: 342.6 E(85289): 5.6e-94
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:2-302)
10 20 30 40 50
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 PDGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKES
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 AIVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 SRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRPVM
250 260 270 280 290 300
300
pF1KB6 QA
::
XP_011 QA
>>XP_005259021 (OMIM: 616759) PREDICTED: nitric oxide sy (304 aa)
initn: 2008 init1: 1079 opt: 1999 Z-score: 1793.9 bits: 340.0 E(85289): 3.5e-93
Smith-Waterman score: 1999; 99.0% identity (99.0% similar) in 304 aa overlap (1-301:1-304)
10 20 30 40 50 60
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 IVSRPLNPFTAKALSGTSP---DDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLE
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
XP_005 IVSRPLNPFTAKALSGTSPGDSDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 KPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 VLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRP
250 260 270 280 290 300
300
pF1KB6 VMQA
::::
XP_005 VMQA
>>XP_006723298 (OMIM: 616759) PREDICTED: nitric oxide sy (304 aa)
initn: 2008 init1: 1079 opt: 1999 Z-score: 1793.9 bits: 340.0 E(85289): 3.5e-93
Smith-Waterman score: 1999; 99.0% identity (99.0% similar) in 304 aa overlap (1-301:1-304)
10 20 30 40 50 60
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESA
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 IVSRPLNPFTAKALSGTSP---DDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLE
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
XP_006 IVSRPLNPFTAKALSGTSPGDSDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 KPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 VLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSRP
250 260 270 280 290 300
300
pF1KB6 VMQA
::::
XP_006 VMQA
>>XP_011525317 (OMIM: 616759) PREDICTED: nitric oxide sy (305 aa)
initn: 2008 init1: 1079 opt: 1999 Z-score: 1793.8 bits: 340.0 E(85289): 3.5e-93
Smith-Waterman score: 1999; 99.0% identity (99.0% similar) in 304 aa overlap (1-301:2-305)
10 20 30 40 50
pF1KB6 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 PDGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKES
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 AIVSRPLNPFTAKALSGTSP---DDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKL
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_011 AIVSRPLNPFTAKALSGTSPGDSDDVQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 EKPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPC
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 AVLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQAEKSR
250 260 270 280 290 300
300
pF1KB6 PVMQA
:::::
XP_011 PVMQA
301 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 20:52:50 2016 done: Mon Nov 7 20:52:52 2016
Total Scan time: 7.440 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]