Result of FASTA (ccds) for
pFN21AB6293
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6293, 806 aa
1>>>pF1KB6293 806 - 806 aa - 806 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8042+/-0.000922; mu= 15.0474+/- 0.056
mean_var=152.5779+/-31.556, 0's: 0 Z-trim(110.1): 89 B-trim: 0 in 0/53
Lambda= 0.103831
statistics sampled from 11277 (11364) to 11277 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.349), width: 16
Scan time: 4.300
The best scores are: opt bits E(32554)
CCDS74262.1 UHRF1 gene_id:29128|Hs108|chr19 ( 806) 5583 848.9 0
CCDS74263.1 UHRF1 gene_id:29128|Hs108|chr19 ( 793) 5501 836.6 0
CCDS6469.1 UHRF2 gene_id:115426|Hs108|chr9 ( 802) 2118 329.9 1.1e-89
>>CCDS74262.1 UHRF1 gene_id:29128|Hs108|chr19 (806 aa)
initn: 5583 init1: 5583 opt: 5583 Z-score: 4529.0 bits: 848.9 E(32554): 0
Smith-Waterman score: 5583; 99.9% identity (100.0% similar) in 806 aa overlap (1-806:1-806)
10 20 30 40 50 60
pF1KB6 MGVFAVPPLSSDTMWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFY
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MGVFAVPPLSADTMWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 RGKQMEDGHTLFDYEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RGKQMEDGHTLFDYEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 STHGEAAAETDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 STHGEAAAETDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 NPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 PLSSVPSEDEWYCPECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PLSSVPSEDEWYCPECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 KECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 DDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDW
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 RSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 GPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKW
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 KRKSAGGGPSRAGSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KRKSAGGGPSRAGSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPAS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 GSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLG
730 740 750 760 770 780
790 800
pF1KB6 RSYAMQVNQPLQTVLNQLFPGYGNGR
::::::::::::::::::::::::::
CCDS74 RSYAMQVNQPLQTVLNQLFPGYGNGR
790 800
>>CCDS74263.1 UHRF1 gene_id:29128|Hs108|chr19 (793 aa)
initn: 5501 init1: 5501 opt: 5501 Z-score: 4462.7 bits: 836.6 E(32554): 0
Smith-Waterman score: 5501; 100.0% identity (100.0% similar) in 793 aa overlap (14-806:1-793)
10 20 30 40 50 60
pF1KB6 MGVFAVPPLSSDTMWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFY
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFY
10 20 30 40
70 80 90 100 110 120
pF1KB6 RGKQMEDGHTLFDYEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RGKQMEDGHTLFDYEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKS
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 STHGEAAAETDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 STHGEAAAETDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 EPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 EPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNY
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 NPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 NPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGS
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB6 PMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB6 PLSSVPSEDEWYCPECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PLSSVPSEDEWYCPECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRT
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB6 KECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYE
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB6 DDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDW
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB6 RSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEP
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB6 GPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKW
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB6 KRKSAGGGPSRAGSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KRKSAGGGPSRAGSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPAS
650 660 670 680 690 700
730 740 750 760 770 780
pF1KB6 GSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLG
710 720 730 740 750 760
790 800
pF1KB6 RSYAMQVNQPLQTVLNQLFPGYGNGR
::::::::::::::::::::::::::
CCDS74 RSYAMQVNQPLQTVLNQLFPGYGNGR
770 780 790
>>CCDS6469.1 UHRF2 gene_id:115426|Hs108|chr9 (802 aa)
initn: 2841 init1: 1470 opt: 2118 Z-score: 1723.9 bits: 329.9 E(32554): 1.1e-89
Smith-Waterman score: 2977; 53.8% identity (74.4% similar) in 833 aa overlap (14-806:1-802)
10 20 30 40 50 60
pF1KB6 MGVFAVPPLSSDTMWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFY
:::::::.:: .: :....:: . .::::... :: :.: :::::
CCDS64 MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFY
10 20 30 40
70 80 90 100 110
pF1KB6 RGKQMEDGHTLFDYEVRLNDTIQLLVRQSLV-LPHSTKERDSELSDTDSGCCLGQSESDK
::::.:.:.:::::.: ::: :::::: . :: .. . ... : . . :
CCDS64 RGKQLENGYTLFDYDVGLNDIIQLLVRPDPDHLPGTSTQIEAK------PCSNSPPKVKK
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 SSTHGEAAAETDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTR-----
. : . . : : . : .:.::::: :::::...::::::.. :::
CCDS64 APRVGPSNQPSTS--ARARLIDPG-FGIYKVNELVDARDVGLGAWFEAHIHSVTRASDGQ
110 120 130 140 150
180 190 200
pF1KB6 ---KAPSRD-EPCSST----------------SRP--------ALEEDVIYHVKYDDYPE
:.: .. :. : : : : .::::::..::.:::
CCDS64 SRGKTPLKNGSSCKRTNGNIKHKSKENTNKLDSVPSTSNSDCVAADEDVIYHIQYDEYPE
160 170 180 190 200 210
210 220 230 240 250 260
pF1KB6 NGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISR-KRETRTA
.:...:: .:.: :::::.::..:.::.:::.::: ..: .::::.::::. : .::
CCDS64 SGTLEMNVKDLRPRARTILKWNELNVGDVVMVNYNVESPGQRGFWFDAEITTLKTISRTK
220 230 240 250 260 270
270 280 290 300 310 320
pF1KB6 RELYANVVLG--DDSLNDCRIIFVDEVFKIERPGEGSPM--VDNPMRRKSGPSCKHCKDD
.:: ... :: . .::::.:: :::.::::::: . :. .:. . :.. : : : :
CCDS64 KELRVKIFLGGSEGTLNDCKIISVDEIFKIERPG-AHPLSFADGKFLRRNDPECDLCGGD
280 290 300 310 320 330
330 340 350 360 370 380
pF1KB6 VNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDAS
.. :. :.:..:::...:. ::.::::..:.:::::.:::..:: :. :::: :..:.:
CCDS64 PEKKCHSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKTDSS
340 350 360 370 380 390
390 400 410 420 430 440
pF1KB6 EVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGT
::: :::::. ::::::: ::.. :.::::.::::::::.:::::::::::::::::::.
CCDS64 EVVKAGERLKMSKKKAKMPSASTESRRDWGRGMACVGRTRECTIVPSNHYGPIPGIPVGS
400 410 420 430 440 450
450 460 470 480 490 500
pF1KB6 MWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSG
:::::::::.:::::::.::::::::::::::::::. :.::.:. ::::::::..:.:
CCDS64 TWRFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLAGGFADEVDRGDEFTYTGSGGKNLAG
460 470 480 490 500 510
510 520 530 540 550 560
pF1KB6 NKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYA
::: . : :: ::: :::::::: ::..:. :::...::.::::::.:. :: : ::::
CCDS64 NKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVRVIRSFKGRKISKYA
520 530 540 550 560 570
570 580 590 600 610 620
pF1KB6 PAEGNRYDGIYKVVKYWPEKGKS-GFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQY
: ::::::::::::::::: ..: ::::::::::::: ::.:::.:: .: ..: : .::
CCDS64 PEEGNRYDGIYKVVKYWPEISSSHGFLVWRYLLRRDDVEPAPWTSEGIERSRRLCLRLQY
580 590 600 610 620 630
630 640 650 660 670 680
pF1KB6 PEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAGSPRRTSK
: :: ..: .. : . ..: : : : :: . . ...
CCDS64 PAGY-----PSDKEGKKPKGQSKKQPSGTTKRP---------ISDDDCPSASKVYKASDS
640 650 660 670 680
690 700 710 720 730 740
pF1KB6 KTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICC
.: ..:: ::. ::::: .: :::.:::. : . : ::.:.:..:.:.::
CCDS64 AEAIEAFQLTPQQQHLIREDCQNQKLWDEVLSHLVEGPN-------FLKKLEQSFMCVCC
690 700 710 720 730
750 760 770 780 790 800
pF1KB6 QELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFP
::::..:.:: : ::::::::.:::.::::::::::.:::..: : :. :::.:. .::
CCDS64 QELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLLDLFFP
740 750 760 770 780 790
pF1KB6 GYGNGR
::..::
CCDS64 GYSKGR
800
806 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:10:47 2016 done: Mon Nov 7 16:10:47 2016
Total Scan time: 4.300 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]