Result of FASTA (omim) for
pFN21AB6282
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6282, 781 aa
1>>>pF1KB6282 781 - 781 aa - 781 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2535+/-0.000456; mu= 8.3206+/- 0.028
mean_var=198.1271+/-39.476, 0's: 0 Z-trim(117.4): 33 B-trim: 224 in 1/51
Lambda= 0.091118
statistics sampled from 29286 (29319) to 29286 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.344), width: 16
Scan time: 14.140
The best scores are: opt bits E(85289)
NP_003194 (OMIM: 189901) GC-rich sequence DNA-bind ( 781) 5083 681.5 3.8e-195
XP_005264577 (OMIM: 189901) PREDICTED: GC-rich seq ( 789) 5057 678.0 4.1e-194
NP_001188263 (OMIM: 189901) GC-rich sequence DNA-b ( 612) 3977 536.0 1.8e-151
XP_011531376 (OMIM: 189901) PREDICTED: GC-rich seq ( 706) 3729 503.4 1.3e-141
XP_016860277 (OMIM: 189901) PREDICTED: GC-rich seq ( 416) 2641 360.2 1e-98
XP_016860276 (OMIM: 189901) PREDICTED: GC-rich seq ( 424) 2615 356.8 1.1e-97
XP_011531377 (OMIM: 189901) PREDICTED: GC-rich seq ( 424) 2615 356.8 1.1e-97
NP_001188264 (OMIM: 189901) GC-rich sequence DNA-b ( 215) 1358 191.3 3.6e-48
>>NP_003194 (OMIM: 189901) GC-rich sequence DNA-binding (781 aa)
initn: 5083 init1: 5083 opt: 5083 Z-score: 3624.5 bits: 681.5 E(85289): 3.8e-195
Smith-Waterman score: 5083; 99.6% identity (100.0% similar) in 781 aa overlap (1-781:1-781)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 RDIDLSCGSGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDV
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 KSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 TFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 NCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 FPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVEDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVEDSK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 KESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSACENEVS
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
NP_003 KESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCENEVS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 KSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLW
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 NGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB6 PQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKE
730 740 750 760 770 780
pF1KB6 D
:
NP_003 D
>>XP_005264577 (OMIM: 189901) PREDICTED: GC-rich sequenc (789 aa)
initn: 4221 init1: 4221 opt: 5057 Z-score: 3606.0 bits: 678.0 E(85289): 4.1e-194
Smith-Waterman score: 5057; 98.6% identity (99.0% similar) in 789 aa overlap (1-781:1-789)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 SSLGEKELSSTV--------KIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKR
:::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_005 SSLGEKELSSTVSSSLFPSVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 KAVKIIEERDIDLSCGSGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLRE
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_005 KAVKIIEERDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLRE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 YEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 ALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 RQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILL
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 KFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFM
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 DSSVEDSKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSSVEDSKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEH
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 SACENEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLK
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STCENEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLK
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB6 LFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFRNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFE
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB6 NSAMRTSIPQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHHLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSAMRTSIPQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHHLD
730 740 750 760 770 780
780
pF1KB6 HLKSLIKED
:::::::::
XP_005 HLKSLIKED
>>NP_001188263 (OMIM: 189901) GC-rich sequence DNA-bindi (612 aa)
initn: 3977 init1: 3977 opt: 3977 Z-score: 2840.2 bits: 536.0 E(85289): 1.8e-151
Smith-Waterman score: 3977; 99.7% identity (100.0% similar) in 612 aa overlap (170-781:1-612)
140 150 160 170 180 190
pF1KB6 IQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPESEPDDHEKRIPFTLRPQTLR
::::::::::::::::::::::::::::::
NP_001 MKRESEDDPESEPDDHEKRIPFTLRPQTLR
10 20 30
200 210 220 230 240 250
pF1KB6 QRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEERDIDLSCGSGSSKVKKFDT
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 QRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEERDIDLSCGNGSSKVKKFDT
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB6 SISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESSSNQALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESSSNQALN
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB6 CKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQ
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB6 LSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSGNCNHQEGTSSDDELPSAEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSGNCNHQEGTSSDDELPSAEM
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB6 IDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLN
280 290 300 310 320 330
500 510 520 530 540 550
pF1KB6 PLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVEDSKKESSSDKKVLSAIINKTII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVEDSKKESSSDKKVLSAIINKTII
340 350 360 370 380 390
560 570 580 590 600 610
pF1KB6 PRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSACENEVSKSRQDLLKSIVSRMKKAVE
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 PRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCENEVSKSRQDLLKSIVSRMKKAVE
400 410 420 430 440 450
620 630 640 650 660 670
pF1KB6 DDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLN
460 470 480 490 500 510
680 690 700 710 720 730
pF1KB6 RYLIIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSIPQLENFIQFLLQSAHKLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYLIIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSIPQLENFIQFLLQSAHKLSR
520 530 540 550 560 570
740 750 760 770 780
pF1KB6 SEFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKED
::::::::::::::::::::::::::::::::::::::::::
NP_001 SEFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKED
580 590 600 610
>>XP_011531376 (OMIM: 189901) PREDICTED: GC-rich sequenc (706 aa)
initn: 3726 init1: 3726 opt: 3729 Z-score: 2663.2 bits: 503.4 E(85289): 1.3e-141
Smith-Waterman score: 4433; 90.0% identity (90.4% similar) in 781 aa overlap (1-781:1-706)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
::::::::::::
XP_011 SSLGEKELSSTV------------------------------------------------
130
190 200 210 220 230 240
pF1KB6 EPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
:::::::::::::::::::::::::::::::::
XP_011 ---------------------------SRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
140 150 160
250 260 270 280 290 300
pF1KB6 RDIDLSCGSGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDV
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDV
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB6 KSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAM
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB6 TFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSG
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB6 NCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREK
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB6 FPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVEDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVEDSK
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB6 KESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSACENEVS
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
XP_011 KESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCENEVS
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB6 KSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLW
530 540 550 560 570 580
670 680 690 700 710 720
pF1KB6 NGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSI
590 600 610 620 630 640
730 740 750 760 770 780
pF1KB6 PQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKE
650 660 670 680 690 700
pF1KB6 D
:
XP_011 D
>>XP_016860277 (OMIM: 189901) PREDICTED: GC-rich sequenc (416 aa)
initn: 2641 init1: 2641 opt: 2641 Z-score: 1893.3 bits: 360.2 E(85289): 1e-98
Smith-Waterman score: 2641; 99.5% identity (100.0% similar) in 409 aa overlap (1-409:1-409)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 RDIDLSCGSGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDV
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 KSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 TFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSG
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRYLYKVKI
370 380 390 400 410
430 440 450 460 470 480
pF1KB6 NCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREK
>>XP_016860276 (OMIM: 189901) PREDICTED: GC-rich sequenc (424 aa)
initn: 1779 init1: 1779 opt: 2615 Z-score: 1874.7 bits: 356.8 E(85289): 1.1e-97
Smith-Waterman score: 2615; 97.6% identity (98.1% similar) in 417 aa overlap (1-409:1-417)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 SSLGEKELSSTV--------KIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKR
:::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_016 SSLGEKELSSTVSSSLFPSVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 KAVKIIEERDIDLSCGSGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLRE
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_016 KAVKIIEERDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLRE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 YEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 ALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRYLY
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 RQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILL
XP_016 KVKI
>>XP_011531377 (OMIM: 189901) PREDICTED: GC-rich sequenc (424 aa)
initn: 1779 init1: 1779 opt: 2615 Z-score: 1874.7 bits: 356.8 E(85289): 1.1e-97
Smith-Waterman score: 2615; 97.6% identity (98.1% similar) in 417 aa overlap (1-409:1-417)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 SSLGEKELSSTV--------KIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKR
:::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_011 SSLGEKELSSTVSSSLFPSVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 KAVKIIEERDIDLSCGSGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLRE
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
XP_011 KAVKIIEERDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLRE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 YEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 ALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRYLY
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 RQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILL
XP_011 KVKI
>>NP_001188264 (OMIM: 189901) GC-rich sequence DNA-bindi (215 aa)
initn: 1358 init1: 1358 opt: 1358 Z-score: 985.7 bits: 191.3 E(85289): 3.6e-48
Smith-Waterman score: 1358; 99.5% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB6 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEE
::::::::::::::::::::::::::
NP_001 EPDDHEKRIPFTLRPQTLRQRMAEESSMDLPIYED
190 200 210
781 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:23:19 2016 done: Sun Nov 6 05:23:21 2016
Total Scan time: 14.140 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]