Result of FASTA (omim) for
pFN21AB6273
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6273, 779 aa
1>>>pF1KB6273 779 - 779 aa - 779 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.0490+/-0.000378; mu= -7.6056+/- 0.024
mean_var=275.1747+/-56.419, 0's: 0 Z-trim(121.0): 52 B-trim: 0 in 0/62
Lambda= 0.077316
statistics sampled from 36910 (36964) to 36910 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.433), width: 16
Scan time: 15.280
The best scores are: opt bits E(85289)
NP_001014308 (OMIM: 613417) transcription factor S ( 779) 5152 588.6 3.5e-167
XP_005266519 (OMIM: 613417) PREDICTED: transcripti ( 780) 5140 587.2 8.7e-167
XP_016876145 (OMIM: 613417) PREDICTED: transcripti ( 767) 5074 579.9 1.4e-164
XP_016876144 (OMIM: 613417) PREDICTED: transcripti ( 767) 5074 579.9 1.4e-164
XP_016876143 (OMIM: 613417) PREDICTED: transcripti ( 768) 5062 578.5 3.6e-164
XP_005266522 (OMIM: 613417) PREDICTED: transcripti ( 732) 4650 532.6 2.4e-150
NP_001265410 (OMIM: 613417) transcription factor S ( 733) 4638 531.2 6e-150
NP_060039 (OMIM: 613417) transcription factor SPT2 ( 733) 4638 531.2 6e-150
NP_001265411 (OMIM: 613417) transcription factor S ( 733) 4638 531.2 6e-150
XP_016876148 (OMIM: 613417) PREDICTED: transcripti ( 720) 4572 523.9 9.6e-148
XP_016876147 (OMIM: 613417) PREDICTED: transcripti ( 721) 4560 522.5 2.4e-147
XP_016876146 (OMIM: 613417) PREDICTED: transcripti ( 767) 4226 485.3 4.2e-136
XP_005266521 (OMIM: 613417) PREDICTED: transcripti ( 768) 4214 483.9 1.1e-135
XP_016876149 (OMIM: 613417) PREDICTED: transcripti ( 720) 4196 481.9 4.1e-135
XP_005266524 (OMIM: 613417) PREDICTED: transcripti ( 721) 4184 480.6 1e-134
XP_016876150 (OMIM: 613417) PREDICTED: transcripti ( 708) 4118 473.2 1.7e-132
XP_016876142 (OMIM: 613417) PREDICTED: transcripti ( 846) 3549 409.8 2.5e-113
NP_001265409 (OMIM: 613417) transcription factor S ( 811) 3542 409.0 4.1e-113
XP_005266508 (OMIM: 613417) PREDICTED: transcripti ( 858) 3542 409.0 4.3e-113
XP_005266518 (OMIM: 613417) PREDICTED: transcripti ( 800) 3537 408.4 6e-113
XP_005266512 (OMIM: 613417) PREDICTED: transcripti ( 847) 3537 408.4 6.3e-113
XP_005266517 (OMIM: 613417) PREDICTED: transcripti ( 812) 3530 407.7 1e-112
XP_005266504 (OMIM: 613417) PREDICTED: transcripti ( 859) 3530 407.7 1.1e-112
XP_005266506 (OMIM: 613417) PREDICTED: transcripti ( 859) 3530 407.7 1.1e-112
XP_005266515 (OMIM: 613417) PREDICTED: transcripti ( 846) 3464 400.3 1.8e-110
XP_005266514 (OMIM: 613417) PREDICTED: transcripti ( 846) 3464 400.3 1.8e-110
XP_005266511 (OMIM: 613417) PREDICTED: transcripti ( 847) 3452 399.0 4.5e-110
XP_005266513 (OMIM: 613417) PREDICTED: transcripti ( 847) 3452 399.0 4.5e-110
>>NP_001014308 (OMIM: 613417) transcription factor SPT20 (779 aa)
initn: 5152 init1: 5152 opt: 5152 Z-score: 3122.5 bits: 588.6 E(85289): 3.5e-167
Smith-Waterman score: 5152; 99.9% identity (100.0% similar) in 779 aa overlap (1-779:1-779)
10 20 30 40 50 60
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQRF
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQRF
670 680 690 700 710 720
730 740 750 760 770
pF1KB6 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
730 740 750 760 770
>>XP_005266519 (OMIM: 613417) PREDICTED: transcription f (780 aa)
initn: 4798 init1: 4798 opt: 5140 Z-score: 3115.3 bits: 587.2 E(85289): 8.7e-167
Smith-Waterman score: 5140; 99.7% identity (99.9% similar) in 780 aa overlap (1-779:1-780)
10 20 30 40 50
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVK-KLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
XP_005 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKQKLRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB6 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQR
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_005 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQR
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB6 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
730 740 750 760 770 780
>>XP_016876145 (OMIM: 613417) PREDICTED: transcription f (767 aa)
initn: 5074 init1: 5074 opt: 5074 Z-score: 3075.6 bits: 579.9 E(85289): 1.4e-164
Smith-Waterman score: 5074; 99.9% identity (100.0% similar) in 766 aa overlap (14-779:2-767)
10 20 30 40 50 60
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
10 20 30 40
70 80 90 100 110 120
pF1KB6 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB6 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB6 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB6 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB6 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB6 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB6 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB6 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQRF
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_016 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQRF
650 660 670 680 690 700
730 740 750 760 770
pF1KB6 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
710 720 730 740 750 760
>>XP_016876144 (OMIM: 613417) PREDICTED: transcription f (767 aa)
initn: 5074 init1: 5074 opt: 5074 Z-score: 3075.6 bits: 579.9 E(85289): 1.4e-164
Smith-Waterman score: 5074; 99.9% identity (100.0% similar) in 766 aa overlap (14-779:2-767)
10 20 30 40 50 60
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
10 20 30 40
70 80 90 100 110 120
pF1KB6 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB6 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB6 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB6 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB6 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB6 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB6 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB6 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQRF
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_016 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQRF
650 660 670 680 690 700
730 740 750 760 770
pF1KB6 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
710 720 730 740 750 760
>>XP_016876143 (OMIM: 613417) PREDICTED: transcription f (768 aa)
initn: 4798 init1: 4798 opt: 5062 Z-score: 3068.4 bits: 578.5 E(85289): 3.6e-164
Smith-Waterman score: 5062; 99.7% identity (99.9% similar) in 767 aa overlap (14-779:2-768)
10 20 30 40 50
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVK-KLRR
:::::::::::::::::::::::::::::::::::::::::: ::::
XP_016 MYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKQKLRR
10 20 30 40
60 70 80 90 100 110
pF1KB6 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB6 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB6 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB6 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB6 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB6 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
530 540 550 560 570 580
600 610 620 630 640 650
pF1KB6 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
590 600 610 620 630 640
660 670 680 690 700 710
pF1KB6 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQR
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_016 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQR
650 660 670 680 690 700
720 730 740 750 760 770
pF1KB6 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
710 720 730 740 750 760
>>XP_005266522 (OMIM: 613417) PREDICTED: transcription f (732 aa)
initn: 4740 init1: 4650 opt: 4650 Z-score: 2820.3 bits: 532.6 E(85289): 2.4e-150
Smith-Waterman score: 4650; 96.8% identity (98.5% similar) in 728 aa overlap (1-728:1-728)
10 20 30 40 50 60
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQRF
:::::::::::::::::::::::::::::::::::::::... :.. .. .: ..
XP_005 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSSA
670 680 690 700 710 720
730 740 750 760 770
pF1KB6 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::..:
XP_005 TSSSAYRQPVKK
730
>>NP_001265410 (OMIM: 613417) transcription factor SPT20 (733 aa)
initn: 4729 init1: 4294 opt: 4638 Z-score: 2813.1 bits: 531.2 E(85289): 6e-150
Smith-Waterman score: 4638; 96.7% identity (98.4% similar) in 729 aa overlap (1-728:1-729)
10 20 30 40 50
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVK-KLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKQKLRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB6 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQR
::::::::::::::::::::::::::::::::::::::::... :.. .. .: ..
NP_001 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSS
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB6 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::..:
NP_001 ATSSSAYRQPVKK
730
>>NP_060039 (OMIM: 613417) transcription factor SPT20 ho (733 aa)
initn: 4729 init1: 4294 opt: 4638 Z-score: 2813.1 bits: 531.2 E(85289): 6e-150
Smith-Waterman score: 4638; 96.7% identity (98.4% similar) in 729 aa overlap (1-728:1-729)
10 20 30 40 50
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVK-KLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_060 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKQKLRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB6 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQR
::::::::::::::::::::::::::::::::::::::::... :.. .. .: ..
NP_060 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSS
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB6 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::..:
NP_060 ATSSSAYRQPVKK
730
>>NP_001265411 (OMIM: 613417) transcription factor SPT20 (733 aa)
initn: 4729 init1: 4294 opt: 4638 Z-score: 2813.1 bits: 531.2 E(85289): 6e-150
Smith-Waterman score: 4638; 96.7% identity (98.4% similar) in 729 aa overlap (1-728:1-729)
10 20 30 40 50
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVK-KLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKQKLRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGN
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAM
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB6 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQ
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB6 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQR
::::::::::::::::::::::::::::::::::::::::... :.. .. .: ..
NP_001 QPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSS
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB6 FQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::..:
NP_001 ATSSSAYRQPVKK
730
>>XP_016876148 (OMIM: 613417) PREDICTED: transcription f (720 aa)
initn: 4662 init1: 4572 opt: 4572 Z-score: 2773.4 bits: 523.9 E(85289): 9.6e-148
Smith-Waterman score: 4572; 96.8% identity (98.5% similar) in 715 aa overlap (14-728:2-716)
10 20 30 40 50 60
pF1KB6 MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRN
10 20 30 40
70 80 90 100 110 120
pF1KB6 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSI
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB6 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGD
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB6 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCP
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB6 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNY
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB6 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMAN
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB6 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQ
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB6 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQ
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB6 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSVENRPEQSLPQQRF
:::::::::::::::::::::::::::::::::::::::... :.. .. .: ..
XP_016 PGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSSA
650 660 670 680 690 700
730 740 750 760 770
pF1KB6 QLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF
:::..:
XP_016 TSSSAYRQPVKK
710 720
779 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:14:13 2016 done: Mon Nov 7 00:14:15 2016
Total Scan time: 15.280 Total Display time: 0.260
Function used was FASTA [36.3.4 Apr, 2011]