Result of FASTA (ccds) for
pFN21AB6260
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6260, 727 aa
1>>>pF1KB6260 727 - 727 aa - 727 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.5085+/-0.00113; mu= -1.6963+/- 0.068
mean_var=402.7049+/-81.223, 0's: 0 Z-trim(113.5): 42 B-trim: 0 in 0/53
Lambda= 0.063912
statistics sampled from 14135 (14166) to 14135 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.435), width: 16
Scan time: 4.620
The best scores are: opt bits E(32554)
CCDS42346.1 UBTF gene_id:7343|Hs108|chr17 ( 727) 4860 462.9 7.6e-130
CCDS11480.1 UBTF gene_id:7343|Hs108|chr17 ( 764) 3397 328.1 3.2e-89
CCDS44704.1 UBTFL1 gene_id:642623|Hs108|chr11 ( 393) 807 88.9 1.6e-17
>>CCDS42346.1 UBTF gene_id:7343|Hs108|chr17 (727 aa)
initn: 4860 init1: 4860 opt: 4860 Z-score: 2444.7 bits: 462.9 E(32554): 7.6e-130
Smith-Waterman score: 4860; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:1-727)
10 20 30 40 50 60
pF1KB6 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 AREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 SPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 ENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD
670 680 690 700 710 720
pF1KB6 SSDSDSN
:::::::
CCDS42 SSDSDSN
>>CCDS11480.1 UBTF gene_id:7343|Hs108|chr17 (764 aa)
initn: 3349 init1: 3349 opt: 3397 Z-score: 1715.4 bits: 328.1 E(32554): 3.2e-89
Smith-Waterman score: 4743; 95.1% identity (95.1% similar) in 759 aa overlap (6-727:6-764)
10 20 30 40 50 60
pF1KB6 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
130 140 150 160 170 180
190 200 210 220
pF1KB6 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPD--------------------
::::::::::::::::::::::::::::::::::::::::
CCDS11 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
190 200 210 220 230 240
230 240 250 260
pF1KB6 -----------------EIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
:::::::::::::::::::::::::::::::::::::::::::
CCDS11 KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB6 PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB6 FLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEE
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB6 KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGK
430 440 450 460 470 480
450 460 470 480 490 500
pF1KB6 LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB6 YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB6 GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLR
610 620 630 640 650 660
630 640 650 660 670 680
pF1KB6 GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESED
670 680 690 700 710 720
690 700 710 720
pF1KB6 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN
::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN
730 740 750 760
>>CCDS44704.1 UBTFL1 gene_id:642623|Hs108|chr11 (393 aa)
initn: 1447 init1: 807 opt: 807 Z-score: 428.2 bits: 88.9 E(32554): 1.6e-17
Smith-Waterman score: 935; 41.4% identity (68.4% similar) in 408 aa overlap (13-398:1-380)
10 20 30 40 50 60
pF1KB6 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
:: :..: .::..:.: :::::.:: ::.:.: :..:.::::: ::::
CCDS44 MALPRSQGHWSNKDILRLLECMENNRPSDDNSTFSSTQSHMDWGKVAF
10 20 30 40
70 80 90 100 110 120
pF1KB6 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
:.:::.::.:::.::: ..::: :: ::.:.:.. ::. :..: .. :::::.::: :
CCDS44 KNFSGEMCRLKWLEISCNLRKFGTLKELVLEAKKCVKKMNKSQKYRNGPDFPKRPLTAYN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
::: :. .:....: : . .:::::::::.::::. :.::::::..::::::..:::::
CCDS44 RFFKESWPQYSQMYPGMRSQELTKILSKKYRELPEQMKQKYIQDFRKEKQEFEEKLARFR
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI
:.::::.:.::::.. .. :..: .::. . :: :
CCDS44 EEHPDLVQKAKKSSVSKR---------TQNK---------------VQKKFQKNIEEV--
170 180 190 200
250 260 270 280 290
pF1KB6 TKSTLTKAERQLKD-KFDGRPTKPPPNSYSLYCAELMAN--MKDVPSTERMVLCSQQWKL
.: :..: .: :: :.: ::: :.: . . .. :. . :::: ...:.
CCDS44 --RSLPKTDRFFKKVKFHGEPQKPPMNGYHKFHQDSWSSKEMQHLSVRERMVEIGRRWQR
210 220 230 240 250 260
300 310 320 330 340
pF1KB6 LSQKEKDAYHKKCDQKKKDYEVELLRFLESL-PE-----EEQQRVLGEEKMLNINK----
. :..:: .... .. .:.:.:.: .:..: :: .:. . :.. .. .
CCDS44 IPQSQKDHFKSQAEELQKQYKVKLDLWLKTLSPENYAAYKESTYAKGKNMAMTGGPDPRL
270 280 290 300 310 320
350 360 370 380 390
pF1KB6 KQATSPASK-KPAQEG---GKG----GSEKPKRP-VSAMFIFSEEKRRQLQEERPELSES
::: .:. : ::: :.: :... . :. . :. :. ..:. : :.:
CCDS44 KQADPQSSSAKGLQEGFGEGQGLQAAGTDSSQTIWVNCHVSMEPEENRKKDREKEESSNS
330 340 350 360 370 380
400 410 420 430 440 450
pF1KB6 ELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQS
CCDS44 SDCSSGEEIEVDV
390
727 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:07:48 2016 done: Mon Nov 7 16:07:48 2016
Total Scan time: 4.620 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]